RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	MRPL49	P40858	161 aa	Predicted RBP	5	□□□□□ -1.61
CDC1	YDR182W	CWC23	P52868	283 aa	Predicted RBP	5	□□□□□ -1.61
CDC1	YDR182W	GIM3	P53900	129 aa		5	□□□□□ -1.61
CDC1	YDR182W	MSC3	Q05812	728 aa		5	□□□□□ -1.61
CDC1	YDR182W	HRD1	Q08109	551 aa		5	□□□□□ -1.61
CDC1	YDR182W	SCP1	Q08873	200 aa		5	□□□□□ -1.61
CDC1	YDR182W	HTZ1	Q12692	134 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	YCP4	P25349	247 aa	Known RBP	4.99	□□□□□ -1.61
CDC1	YDR182W	ERV1	P27882	189 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	SEC66	P33754	206 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	YBR184W	P38299	523 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	YPT31	P38555	223 aa	Known RBP	4.99	□□□□□ -1.61
CDC1	YDR182W	LST8	P41318	303 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	AIM25	P47140	327 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	CAB4	P53332	305 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	ACT1	P60010	375 aa	Known RBP	4.99	□□□□□ -1.61
CDC1	YDR182W	THI74	Q04083	370 aa		4.99	□□□□□ -1.61
CDC1	YDR182W	GRH1	Q04410	372 aa	Known RBP	4.99	□□□□□ -1.61
CDC1	YDR182W	NGL1	Q08213	363 aa	Known RBP	4.99	□□□□□ -1.61
CDC1	YDR182W	VPS63	O13549	108 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	AUA1	P32450	94 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	UTR5	P32630	166 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	IPI1	P38803	334 aa	Predicted RBP	4.98	□□□□□ -1.61
CDC1	YDR182W	FLO5	P38894	1075 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	DFG10	P40526	253 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	RAI1	P53063	387 aa	Known RBP	4.98	□□□□□ -1.61
CDC1	YDR182W	FSH2	Q05015	223 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	RTT103	Q05543	409 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	YOR385W	Q08909	290 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	ATG5	Q12380	294 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	PRM4	Q12498	284 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	YBR255C-A	Q3E776	120 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	HBN1	Q96VH4	193 aa		4.98	□□□□□ -1.61
CDC1	YDR182W	SOD1	P00445	154 aa	Known RBP	4.97	□□□□□ -1.61
CDC1	YDR182W	CAP2	P13517	287 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	CPR4	P25334	318 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	IMD2	P38697	523 aa	Known RBP	4.97	□□□□□ -1.61
CDC1	YDR182W	RFC2	P40348	353 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	YJR012C	P47087	207 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	BUL1	P48524	976 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	CPD1	P53314	239 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	FMP42	Q04991	504 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	YLR281C	Q05863	155 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	YPL199C	Q08954	240 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	FEX2	Q08991	375 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	RKI1	Q12189	258 aa		4.97	□□□□□ -1.61
CDC1	YDR182W	TRP4	P07285	380 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC1	YDR182W	HYM1	P32464	399 aa		4.96	□□□□□ -1.62
CDC1	YDR182W	LSM12	P38828	187 aa	Known RBP	4.96	□□□□□ -1.62
CDC1	YDR182W	GET2	P40056	285 aa		4.96	□□□□□ -1.62
CDC1	YDR182W	ARP3	P47117	449 aa	Known RBP	4.96	□□□□□ -1.62
CDC1	YDR182W	CAX4	P53223	239 aa		4.96	□□□□□ -1.62
CDC1	YDR182W	RPN13	O13563	156 aa		4.95	□□□□□ -1.62
CDC1	YDR182W	CYC1	P00044	109 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC1	YDR182W	PET494	P07390	489 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC1	YDR182W	IRC24	P40580	263 aa		4.95	□□□□□ -1.62
CDC1	YDR182W	HAM1	P47119	197 aa	Known RBP	4.95	□□□□□ -1.62
CDC1	YDR182W	ERG25	P53045	309 aa		4.95	□□□□□ -1.62
CDC1	YDR182W	GTF1	P53260	183 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC1	YDR182W	YGR219W	P53307	113 aa		4.95	□□□□□ -1.62
CDC1	YDR182W	LAG1	P38703	411 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	YAR068W	P39564	161 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	LSM7	P53905	115 aa	Known RBP	4.94	□□□□□ -1.62
CDC1	YDR182W	DYN2	Q02647	92 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	YOL029C	Q08187	201 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	FEX1	Q08913	375 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	RDI1	Q12434	202 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	TAR1	Q8TGM6	124 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	SPT14	P32363	452 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	SDH4	P37298	181 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	ECM33	P38248	429 aa	Known RBP	4.94	□□□□□ -1.62
CDC1	YDR182W	AIM20	P40451	204 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	LSM1	P47017	172 aa	Known RBP	4.94	□□□□□ -1.62
CDC1	YDR182W	ECM27	P47144	725 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	PEX10	Q05568	337 aa		4.94	□□□□□ -1.62
CDC1	YDR182W	URA5	P13298	226 aa	Known RBP	4.93	□□□□□ -1.62
CDC1	YDR182W	QDR3	P38227	689 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	MIC12	P38341	106 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	RIP-Chip
CDC1	YDR182W	YER137C	P40083	148 aa	Known RBP	4.93	□□□□□ -1.62
CDC1	YDR182W	YNL194C	P40169	301 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	SSU72	P53538	206 aa	Predicted RBP	4.93	□□□□□ -1.62
CDC1	YDR182W	SWT21	P53873	357 aa	Predicted RBP	4.93	□□□□□ -1.62
CDC1	YDR182W	YDR274C	P87283	123 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	PAM18	Q07914	168 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	YNG1	Q08465	219 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	YOR352W	Q08816	343 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	YPR013C	Q12145	317 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	ATG31	Q12421	196 aa		4.93	□□□□□ -1.62
CDC1	YDR182W	QCR2	P07257	368 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	GRX2	P17695	143 aa	Known RBP	4.92	□□□□□ -1.62
CDC1	YDR182W	PDC2	P32896	925 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	ERV15	P38312	142 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	MPC2	P38857	129 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	SNU13	P39990	126 aa	Known RBP	4.92	□□□□□ -1.62
CDC1	YDR182W	YGR210C	P42942	411 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	TPN1	P53099	579 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	VPS28	Q02767	242 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	EST3	Q03096	181 aa		4.92	□□□□□ -1.62
CDC1	YDR182W	SCW10	Q04951	389 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 206.6 ms