RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W ARC15P40518 154 aaRIP-Chip data3.58□□□□□ -1.84not detected
UBC1YDR177W ECO1P43605 281 aa3.58□□□□□ -1.84
UBC1YDR177W BUD13P46947 266 aaPredicted RBP3.58□□□□□ -1.84
UBC1YDR177W OST2P46964 130 aa3.58□□□□□ -1.84
UBC1YDR177W GAS3Q03655 524 aa3.58□□□□□ -1.84
UBC1YDR177W DYN3Q04949 312 aa3.58□□□□□ -1.84
UBC1YDR177W ATG39Q06159 398 aa3.58□□□□□ -1.84
UBC1YDR177W YPL162CQ12042 273 aa3.58□□□□□ -1.84
UBC1YDR177W URA5P13298 226 aaKnown RBP3.57□□□□□ -1.84
UBC1YDR177W BET1P22804 142 aa3.57□□□□□ -1.84
UBC1YDR177W TVP38P36164 337 aa3.57□□□□□ -1.84
UBC1YDR177W PRE5P40302 234 aaKnown RBP3.57□□□□□ -1.84
UBC1YDR177W YIL177CP40434 1758 aa3.57□□□□□ -1.84
UBC1YDR177W YJL225CP40889 1758 aa3.57□□□□□ -1.84
UBC1YDR177W PFS2P42841 465 aaKnown RBP3.57□□□□□ -1.84
UBC1YDR177W RPA43P46669 326 aa3.57□□□□□ -1.84
UBC1YDR177W TMC1Q08422 150 aaPredicted RBP3.57□□□□□ -1.84
UBC1YDR177W YRF1-2P40105 1681 aa3.56□□□□□ -1.84
UBC1YDR177W YHR139C-AO13536 103 aa3.56□□□□□ -1.84
UBC1YDR177W SGA1P08019 549 aa3.56□□□□□ -1.84
UBC1YDR177W TOM40P23644 387 aaKnown RBP3.56□□□□□ -1.84
UBC1YDR177W BUB2P26448 306 aaPredicted RBP3.56□□□□□ -1.84
UBC1YDR177W MED6P38782 295 aa3.56□□□□□ -1.84
UBC1YDR177W GIM4P40005 111 aaKnown RBP3.56□□□□□ -1.84
UBC1YDR177W YFR045WP43617 309 aa3.56□□□□□ -1.84
UBC1YDR177W YGR026WP53217 278 aa3.56□□□□□ -1.84
UBC1YDR177W NQM1P53228 333 aaPredicted RBP3.56□□□□□ -1.84
UBC1YDR177W ECM11Q04110 302 aa3.56□□□□□ -1.84
UBC1YDR177W HNT1Q04344 158 aaKnown RBP3.56□□□□□ -1.84
UBC1YDR177W YPR063CQ12160 140 aa3.56□□□□□ -1.84
UBC1YDR177W YIR035CP40579 254 aa3.55□□□□□ -1.84
UBC1YDR177W ARO8P53090 500 aaKnown RBP3.55□□□□□ -1.84
UBC1YDR177W HST4P53688 370 aa3.55□□□□□ -1.84
UBC1YDR177W DGA1Q08650 418 aa3.55□□□□□ -1.84
UBC1YDR177W MPD1Q12404 318 aaKnown RBP3.55□□□□□ -1.84
UBC1YDR177W EFG1Q3E705 233 aaKnown RBP3.55□□□□□ -1.84
UBC1YDR177W YLR419WQ06698 1435 aaKnown RBP3.54□□□□□ -1.84
UBC1YDR177W MLP1Q02455 1875 aaKnown RBP3.54□□□□□ -1.84
UBC1YDR177W URB1P34241 1764 aaKnown RBP3.54□□□□□ -1.84
UBC1YDR177W PBI2P0CT04 75 aaKnown RBP3.54□□□□□ -1.84
UBC1YDR177W TKL2P33315 681 aa3.54□□□□□ -1.84
UBC1YDR177W UTH1P36135 365 aa3.54□□□□□ -1.84
UBC1YDR177W YER188WP40103 239 aa3.54□□□□□ -1.84
UBC1YDR177W MOG1P47123 218 aa3.54□□□□□ -1.84
UBC1YDR177W GPI17Q04080 534 aa3.54□□□□□ -1.84
UBC1YDR177W YPR127WQ06494 345 aa3.54□□□□□ -1.84
UBC1YDR177W FKS3Q04952 1785 aa3.53□□□□□ -1.84
UBC1YDR177W RAD10P06838 210 aa3.53□□□□□ -1.84
UBC1YDR177W PET54P10834 293 aa3.53□□□□□ -1.84
UBC1YDR177W YCR090CP25654 182 aaKnown RBP3.53□□□□□ -1.84
UBC1YDR177W YKL102CP34249 101 aa3.53□□□□□ -1.84
UBC1YDR177W YHR125WP38831 101 aa3.53□□□□□ -1.84
UBC1YDR177W AVT2P39981 480 aa3.53□□□□□ -1.84
UBC1YDR177W ARP3P47117 449 aaKnown RBP3.53□□□□□ -1.84
UBC1YDR177W DSK2P48510 373 aa3.53□□□□□ -1.84
UBC1YDR177W YDR249CQ03787 373 aa3.53□□□□□ -1.84
UBC1YDR177W TSA2Q04120 196 aa3.53□□□□□ -1.84
UBC1YDR177W YDR114CQ04597 100 aa3.53□□□□□ -1.84
UBC1YDR177W CDC8P00572 216 aa3.52□□□□□ -1.85
UBC1YDR177W RPL9AP05738 191 aaKnown RBP3.52□□□□□ -1.85
UBC1YDR177W YLR156WP0CE96 114 aa3.52□□□□□ -1.85
UBC1YDR177W YLR159WP0CE97 114 aa3.52□□□□□ -1.85
UBC1YDR177W YLR161WP0CE98 114 aa3.52□□□□□ -1.85
UBC1YDR177W RPB3P16370 318 aaKnown RBP3.52□□□□□ -1.85
UBC1YDR177W PET9P18239 318 aaKnown RBP3.52□□□□□ -1.85
UBC1YDR177W MRPS28P21771 286 aa3.52□□□□□ -1.85
UBC1YDR177W VMA11P32842 164 aa3.52□□□□□ -1.85
UBC1YDR177W NUF2P33895 451 aa3.52□□□□□ -1.85
UBC1YDR177W MID2P36027 376 aa3.52□□□□□ -1.85
UBC1YDR177W SKI6P46948 246 aaPredicted RBP3.52□□□□□ -1.85
UBC1YDR177W RPL9BP51401 191 aaKnown RBP3.52□□□□□ -1.85
UBC1YDR177W YGR042WP53227 271 aa3.52□□□□□ -1.85
UBC1YDR177W PGA1P53896 198 aa3.52□□□□□ -1.85
UBC1YDR177W YDC1Q02896 317 aa3.52□□□□□ -1.85
UBC1YDR177W PKR1Q03880 122 aaKnown RBP3.52□□□□□ -1.85
UBC1YDR177W PIN3Q06449 215 aa3.52□□□□□ -1.85
UBC1YDR177W TSC3Q3E790 80 aa3.52□□□□□ -1.85
UBC1YDR177W YFR032C-BQ8TGU2 87 aa3.52□□□□□ -1.85
UBC1YDR177W SAS5Q99314 248 aa3.52□□□□□ -1.85
UBC1YDR177W Q0255P03881 472 aa3.51□□□□□ -1.85
UBC1YDR177W MDH3P32419 343 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
UBC1YDR177W UTP30P36144 274 aaKnown RBP3.51□□□□□ -1.85
UBC1YDR177W PRM10P42946 383 aa3.51□□□□□ -1.85
UBC1YDR177W XPT1P47165 209 aa3.51□□□□□ -1.85
UBC1YDR177W MPA43P53583 542 aaPredicted RBP3.51□□□□□ -1.85
UBC1YDR177W FCF1Q05498 189 aaPredicted RBP3.51□□□□□ -1.85
UBC1YDR177W YOR342CQ12182 319 aa3.51□□□□□ -1.85
UBC1YDR177W PSF1Q12488 208 aa3.51□□□□□ -1.85
UBC1YDR177W ADE6P38972 1358 aaKnown RBP3.51□□□□□ -1.85
UBC1YDR177W YRF1-3P0CX14 1859 aa3.5□□□□□ -1.85
UBC1YDR177W YRF1-7P0CX15 1859 aa3.5□□□□□ -1.85
UBC1YDR177W YRF1-6P53819 1859 aa3.5□□□□□ -1.85
UBC1YDR177W HIS3P06633 220 aa3.5□□□□□ -1.85
UBC1YDR177W CCA1P21269 546 aa3.5□□□□□ -1.85
UBC1YDR177W IDP1P21954 428 aaKnown RBP3.5□□□□□ -1.85
UBC1YDR177W LDB16P25587 256 aa3.5□□□□□ -1.85
UBC1YDR177W SEC17P32602 292 aa3.5□□□□□ -1.85
UBC1YDR177W YKR032WP36127 104 aa3.5□□□□□ -1.85
UBC1YDR177W YGL088WP53151 121 aa3.5□□□□□ -1.85
UBC1YDR177W RAV2Q03956 351 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms