RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	HHO1	P53551	258 aa		3.96	□□□□□ -1.78
SUP35	YDR172W	PAM18	Q07914	168 aa		3.96	□□□□□ -1.78
SUP35	YDR172W	USV1	Q12132	391 aa		3.96	□□□□□ -1.78
SUP35	YDR172W	PRR2	Q12310	699 aa		3.96	□□□□□ -1.78
SUP35	YDR172W	DGK1	Q12382	290 aa		3.96	□□□□□ -1.78
SUP35	YDR172W	AGC1	Q12482	902 aa		3.96	□□□□□ -1.78
SUP35	YDR172W	MEC1	P38111	2368 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	CDC50	P25656	391 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	ERV1	P27882	189 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	NTF2	P33331	125 aa	Known RBP	3.95	□□□□□ -1.78
SUP35	YDR172W	ATG8	P38182	117 aa	RIP-Chip data	3.95	□□□□□ -1.78	not detected
SUP35	YDR172W	PCL7	P40186	285 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	PGD1	P40356	397 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	POG1	P40473	351 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	UBC13	P52490	153 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	YNR066C	P53752	436 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	WSC2	P53832	503 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	HSK3	P69852	69 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	YDC1	Q02896	317 aa		3.95	□□□□□ -1.78
SUP35	YDR172W	TRP4	P07285	380 aa	Predicted RBP	3.94	□□□□□ -1.78
SUP35	YDR172W	SEN34	P39707	275 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YIL077C	P40508	320 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	VMA21	P41806	77 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YFL051C	P43552	160 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	GON7	P46984	123 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YGL262W	P53054	175 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	PEF1	P53238	335 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	FSH2	Q05015	223 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	UPS1	Q05776	175 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	CRR1	Q05790	422 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YPL264C	Q08980	353 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	FCY22	Q12119	530 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	URA5	P13298	226 aa	Known RBP	3.94	□□□□□ -1.78
SUP35	YDR172W	RPB3	P16370	318 aa	Known RBP	3.94	□□□□□ -1.78
SUP35	YDR172W	MAK32	P23060	363 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	SPO13	P23624	291 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YOX1	P34161	385 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	SHG1	P38337	142 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	RMD6	P39975	231 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	GEP7	P53171	287 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YAP1802	P53309	568 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	YTH1	Q06102	208 aa	Predicted RBP	3.94	□□□□□ -1.78
SUP35	YDR172W	YOL029C	Q08187	201 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	RFM1	Q12192	310 aa		3.94	□□□□□ -1.78
SUP35	YDR172W	AHT1	P29589	182 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	PRM5	P40476	318 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	DAN1	P47178	298 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	PDR17	P53844	350 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	ACS1	Q01574	713 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	ECM18	Q04623	453 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	RPS23A	P0CX29	145 aa	Known RBP	3.93	□□□□□ -1.78
SUP35	YDR172W	RPS23B	P0CX30	145 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	YBR013C	P38215	129 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	YBR292C	P38357	123 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	YGR269W	P40326	108 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	GTT1	P40582	234 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	ARP3	P47117	449 aa	Known RBP	3.93	□□□□□ -1.78
SUP35	YDR172W	MOG1	P47123	218 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	BNS1	P50084	137 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	TIM21	P53220	239 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	YGR050C	P53231	118 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	SMM1	P53720	384 aa	Known RBP	3.93	□□□□□ -1.78
SUP35	YDR172W	YPL067C	Q02754	198 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	API2	Q04413	109 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	GAT3	Q07928	141 aa		3.93	□□□□□ -1.78
SUP35	YDR172W	YBR056W-A	I2HB52	66 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	YLR415C	O13578	112 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	RPL39	P04650	51 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	ADH3	P07246	375 aa	Known RBP	3.92	□□□□□ -1.78
SUP35	YDR172W	APA2	P22108	325 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	ROX3	P25046	220 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	POF1	P25576	258 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	SLM1	P40485	686 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	ERG25	P53045	309 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	CRH1	P53301	507 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	HCH1	P53834	153 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	YPD1	Q07688	167 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	ZEO1	Q08245	113 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	RAD28	Q12021	506 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	YOR029W	Q12243	111 aa		3.92	□□□□□ -1.78
SUP35	YDR172W	SME1	Q12330	94 aa	Predicted RBP	3.92	□□□□□ -1.78
SUP35	YDR172W	FCY2	P17064	533 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	RPI1	P23250	407 aa	Known RBP	3.91	□□□□□ -1.78
SUP35	YDR172W	SDH4	P37298	181 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	YBR220C	P38318	560 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	RTC3	P38804	111 aa	Predicted RBP	3.91	□□□□□ -1.78
SUP35	YDR172W	RTS2	P40962	232 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	YFL015C	P43578	164 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	CRZ1	P53968	678 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	LIP2	Q06005	328 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	ARR3	Q06598	404 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	POC4	Q12245	148 aa	Predicted RBP	3.91	□□□□□ -1.78
SUP35	YDR172W	ERV2	Q12284	196 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	SNU23	Q12368	194 aa	Predicted RBP	3.91	□□□□□ -1.78
SUP35	YDR172W	BOL1	Q3E793	110 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	YDR157W	A0A023PZE8	133 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	RPS25B	P0C0T4	108 aa	Known RBP	3.91	□□□□□ -1.78
SUP35	YDR172W	PCL2	P25693	308 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	LAC1	P28496	418 aa		3.91	□□□□□ -1.78
SUP35	YDR172W	TAX4	P47030	604 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms