RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C DYN3Q04949 312 aa2.47□□□□□ -2.01
SHU2YDR078C PDR18P53756 1333 aa2.46□□□□□ -2.02
SHU2YDR078C NRG2P38082 220 aa2.46□□□□□ -2.02
SHU2YDR078C TMA22P47089 198 aaPredicted RBP2.46□□□□□ -2.02
SHU2YDR078C SHH4Q06236 168 aa2.46□□□□□ -2.02
SHU2YDR078C YOL014WQ08110 124 aa2.46□□□□□ -2.02
SHU2YDR078C YLR050CQ12155 161 aaKnown RBP2.46□□□□□ -2.02
SHU2YDR078C YPR014CQ6B0W2 109 aa2.46□□□□□ -2.02
SHU2YDR078C YIL177CP40434 1758 aa2.46□□□□□ -2.02
SHU2YDR078C YJL225CP40889 1758 aa2.46□□□□□ -2.02
SHU2YDR078C CPA1P07258 411 aaKnown RBP2.45□□□□□ -2.02
SHU2YDR078C SEC14P24280 304 aaKnown RBP2.45□□□□□ -2.02
SHU2YDR078C YER121WP40076 114 aa2.45□□□□□ -2.02
SHU2YDR078C AGE2P40529 298 aa2.45□□□□□ -2.02
SHU2YDR078C HPT1Q04178 221 aaKnown RBP2.45□□□□□ -2.02
SHU2YDR078C MPD1Q12404 318 aaKnown RBP2.45□□□□□ -2.02
SHU2YDR078C ATG40Q99325 256 aa2.45□□□□□ -2.02
SHU2YDR078C YAR023CD6VPM8 179 aa2.44□□□□□ -2.02
SHU2YDR078C POR1P04840 283 aaKnown RBP2.44□□□□□ -2.02
SHU2YDR078C FZF1P32805 299 aa2.44□□□□□ -2.02
SHU2YDR078C FES1P38260 290 aa2.44□□□□□ -2.02
SHU2YDR078C DSE2P38844 325 aa2.44□□□□□ -2.02
SHU2YDR078C AVT2P39981 480 aa2.44□□□□□ -2.02
SHU2YDR078C IGO1P53897 168 aa2.44□□□□□ -2.02
SHU2YDR078C GPI17Q04080 534 aa2.44□□□□□ -2.02
SHU2YDR078C NAT3Q06504 195 aa2.44□□□□□ -2.02
SHU2YDR078C YML100W-AQ8TGT0 57 aa2.44□□□□□ -2.02
SHU2YDR078C YKL102CP34249 101 aa2.43□□□□□ -2.02
SHU2YDR078C MPC3P53311 146 aa2.43□□□□□ -2.02
SHU2YDR078C PEX11Q12462 236 aa2.43□□□□□ -2.02
SHU2YDR078C YHR086W-AQ3E746 53 aa2.43□□□□□ -2.02
SHU2YDR078C TVP38P36164 337 aa2.42□□□□□ -2.02
SHU2YDR078C YBR209WP38311 105 aa2.42□□□□□ -2.02
SHU2YDR078C NSG1P38837 291 aa2.42□□□□□ -2.02
SHU2YDR078C MTW1P39731 289 aa2.42□□□□□ -2.02
SHU2YDR078C VTC1P40046 129 aaRIP-Chip data2.42□□□□□ -2.02not detected
SHU2YDR078C YMR099CQ03161 297 aaKnown RBP2.42□□□□□ -2.02
SHU2YDR078C YOR342CQ12182 319 aa2.42□□□□□ -2.02
SHU2YDR078C BOL1Q3E793 110 aa2.42□□□□□ -2.02
SHU2YDR078C YLR236CA0A023PZG4 107 aa2.41□□□□□ -2.02
SHU2YDR078C MDH2P22133 377 aa2.41□□□□□ -2.02
SHU2YDR078C GAA1P39012 614 aa2.41□□□□□ -2.02
SHU2YDR078C AYR1P40471 297 aa2.41□□□□□ -2.02
SHU2YDR078C YFL019CP43576 117 aa2.41□□□□□ -2.02
SHU2YDR078C GPI14P47088 403 aaKnown RBP2.41□□□□□ -2.02
SHU2YDR078C SML1Q04964 104 aa2.41□□□□□ -2.02
SHU2YDR078C YLR412C-AQ3E742 68 aa2.41□□□□□ -2.02
SHU2YDR078C QCR2P07257 368 aa2.4□□□□□ -2.03
SHU2YDR078C SPO13P23624 291 aa2.4□□□□□ -2.03
SHU2YDR078C PEP8P40335 379 aa2.4□□□□□ -2.03
SHU2YDR078C YFR054CP43622 192 aa2.4□□□□□ -2.03
SHU2YDR078C VPS71Q03433 280 aa2.4□□□□□ -2.03
SHU2YDR078C DGK1Q12382 290 aa2.4□□□□□ -2.03
SHU2YDR078C CMD1P06787 147 aaKnown RBP2.39□□□□□ -2.03
SHU2YDR078C AME1P38313 324 aa2.39□□□□□ -2.03
SHU2YDR078C RFC2P40348 353 aa2.39□□□□□ -2.03
SHU2YDR078C BUD25P85052 153 aa2.39□□□□□ -2.03
SHU2YDR078C PLP1Q04004 230 aa2.39□□□□□ -2.03
SHU2YDR078C MET5P47169 1442 aa2.39□□□□□ -2.03
SHU2YDR078C TFC1P32367 649 aa2.38□□□□□ -2.03
SHU2YDR078C SAY1P53324 424 aa2.38□□□□□ -2.03
SHU2YDR078C POP3P53833 195 aaPredicted RBP2.38□□□□□ -2.03
SHU2YDR078C HSK3P69852 69 aa2.38□□□□□ -2.03
SHU2YDR078C YMR295CQ03559 197 aa2.38□□□□□ -2.03
SHU2YDR078C CUE4Q04201 117 aaPredicted RBP2.38□□□□□ -2.03
SHU2YDR078C TIR1P10863 254 aa2.37□□□□□ -2.03
SHU2YDR078C ERJ5P43613 295 aaPredicted RBP2.37□□□□□ -2.03
SHU2YDR078C YLR053CQ12026 108 aa2.37□□□□□ -2.03
SHU2YDR078C PHO85P17157 305 aa2.36□□□□□ -2.03
SHU2YDR078C VMA22P38784 181 aa2.36□□□□□ -2.03
SHU2YDR078C CUP9P41817 306 aa2.36□□□□□ -2.03
SHU2YDR078C KNH1P50112 268 aa2.36□□□□□ -2.03
SHU2YDR078C SOL1P50278 321 aa2.36□□□□□ -2.03
SHU2YDR078C EFM5P53200 248 aaKnown RBP2.36□□□□□ -2.03
SHU2YDR078C ANT1Q06497 328 aa2.36□□□□□ -2.03
SHU2YDR078C YDL180WQ12301 547 aa2.36□□□□□ -2.03
SHU2YDR078C RDI1Q12434 202 aa2.36□□□□□ -2.03
SHU2YDR078C NSP1P14907 823 aaKnown RBP2.35□□□□□ -2.03
SHU2YDR078C SEC11P15367 167 aa2.35□□□□□ -2.03
SHU2YDR078C UBC6P33296 250 aaPredicted RBP2.35□□□□□ -2.03
SHU2YDR078C TVP23P38962 199 aa2.35□□□□□ -2.03
SHU2YDR078C TTI2P47168 421 aa2.35□□□□□ -2.03
SHU2YDR078C SHH3Q04487 196 aa2.35□□□□□ -2.03
SHU2YDR078C RAD28Q12021 506 aa2.35□□□□□ -2.03
SHU2YDR078C TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
SHU2YDR078C SPC25P40014 221 aa2.34□□□□□ -2.03
SHU2YDR078C XPT1P47165 209 aa2.34□□□□□ -2.03
SHU2YDR078C MPA43P53583 542 aaPredicted RBP2.34□□□□□ -2.03
SHU2YDR078C YMR253CQ04835 414 aa2.34□□□□□ -2.03
SHU2YDR078C IRC23Q08416 157 aa2.34□□□□□ -2.03
SHU2YDR078C IDP1P21954 428 aaKnown RBP2.33□□□□□ -2.04
SHU2YDR078C PAM17P36147 197 aa2.33□□□□□ -2.04
SHU2YDR078C NSA2P40078 261 aaKnown RBP2.33□□□□□ -2.04
SHU2YDR078C DIG2Q03373 323 aaKnown RBP2.33□□□□□ -2.04
SHU2YDR078C NSL1Q12143 216 aa2.33□□□□□ -2.04
SHU2YDR078C DER1P38307 211 aa2.32□□□□□ -2.04
SHU2YDR078C EDC3P39998 551 aaKnown RBP2.32□□□□□ -2.04
SHU2YDR078C YNL200CP40165 246 aaKnown RBP2.32□□□□□ -2.04
SHU2YDR078C YFH7P43591 353 aa2.32□□□□□ -2.04
SHU2YDR078C YGL235WP53071 178 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms