RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YPL073CP40323 161 aa1.34□□□□□ -2.19
SHS1YDL225W YJR111CP47148 283 aaKnown RBP1.34□□□□□ -2.19
SHS1YDL225W ARO8P53090 500 aaKnown RBP1.34□□□□□ -2.19
SHS1YDL225W YLR031WQ07978 186 aa1.34□□□□□ -2.19
SHS1YDL225W UBC12P52491 188 aa1.33□□□□□ -2.2
SHS1YDL225W MPA43P53583 542 aaPredicted RBP1.33□□□□□ -2.2
SHS1YDL225W DYN3Q04949 312 aa1.33□□□□□ -2.2
SHS1YDL225W YPR174CQ06616 221 aaPredicted RBP1.33□□□□□ -2.2
SHS1YDL225W YHR007C-AQ07074 71 aa1.33□□□□□ -2.2
SHS1YDL225W YOL024WQ08172 172 aa1.33□□□□□ -2.2
SHS1YDL225W YML100W-AQ8TGT0 57 aa1.33□□□□□ -2.2
SHS1YDL225W YAR023CD6VPM8 179 aa1.32□□□□□ -2.2
SHS1YDL225W ADE1P27616 306 aa1.32□□□□□ -2.2
SHS1YDL225W YER134CP40081 178 aa1.32□□□□□ -2.2
SHS1YDL225W MSB2P32334 1306 aa1.32□□□□□ -2.2
SHS1YDL225W TAH1P25638 111 aaPredicted RBP1.32□□□□□ -2.2
SHS1YDL225W YER076CP40049 302 aa1.32□□□□□ -2.2
SHS1YDL225W RTC4P53850 401 aa1.32□□□□□ -2.2
SHS1YDL225W NOC4Q06512 552 aaPredicted RBP1.32□□□□□ -2.2
SHS1YDL225W YNL146C-AQ3E7Z1 64 aa1.32□□□□□ -2.2
SHS1YDL225W SNF4P12904 322 aa1.31□□□□□ -2.2
SHS1YDL225W TRX3P25372 127 aa1.31□□□□□ -2.2
SHS1YDL225W CAF4P36130 643 aa1.31□□□□□ -2.2
SHS1YDL225W RIO2P40160 425 aaKnown RBP1.31□□□□□ -2.2
SHS1YDL225W TDA4P47153 279 aa1.31□□□□□ -2.2
SHS1YDL225W UBC7Q02159 165 aa1.31□□□□□ -2.2
SHS1YDL225W YMR295CQ03559 197 aa1.31□□□□□ -2.2
SHS1YDL225W YMR315WQ04869 349 aaKnown RBP1.31□□□□□ -2.2
SHS1YDL225W IRC23Q08416 157 aa1.31□□□□□ -2.2
SHS1YDL225W ECM4P36156 370 aa1.3□□□□□ -2.2
SHS1YDL225W NAT3Q06504 195 aa1.3□□□□□ -2.2
SHS1YDL225W YLR036CQ07986 203 aa1.3□□□□□ -2.2
SHS1YDL225W MTW1P39731 289 aa1.29□□□□□ -2.2
SHS1YDL225W FLX1P40464 311 aa1.29□□□□□ -2.2
SHS1YDL225W SHH3Q04487 196 aa1.29□□□□□ -2.2
SHS1YDL225W MDM35O60200 86 aa1.29□□□□□ -2.2
SHS1YDL225W TIR1P10863 254 aa1.29□□□□□ -2.2
SHS1YDL225W MGT1P26188 188 aa1.29□□□□□ -2.2
SHS1YDL225W FMP23P38231 175 aa1.29□□□□□ -2.2
SHS1YDL225W GIM3P53900 129 aa1.29□□□□□ -2.2
SHS1YDL225W RCE1Q03530 315 aa1.29□□□□□ -2.2
SHS1YDL225W GRX8Q05926 109 aa1.29□□□□□ -2.2
SHS1YDL225W YDL085C-AQ3E7B7 68 aaKnown RBP1.29□□□□□ -2.2
SHS1YDL225W PAM17P36147 197 aa1.28□□□□□ -2.2
SHS1YDL225W DAD4P69851 72 aa1.28□□□□□ -2.2
SHS1YDL225W RNH202Q05635 350 aa1.28□□□□□ -2.2
SHS1YDL225W YPR013CQ12145 317 aa1.28□□□□□ -2.2
SHS1YDL225W NSP1P14907 823 aaKnown RBP1.27□□□□□ -2.21
SHS1YDL225W SHG1P38337 142 aa1.27□□□□□ -2.21
SHS1YDL225W CUP9P41817 306 aa1.27□□□□□ -2.21
SHS1YDL225W YFL019CP43576 117 aa1.27□□□□□ -2.21
SHS1YDL225W YAE1P47118 141 aaPredicted RBP1.27□□□□□ -2.21
SHS1YDL225W HOP2P53187 214 aa1.27□□□□□ -2.21
SHS1YDL225W NRK1P53915 240 aa1.27□□□□□ -2.21
SHS1YDL225W AIM34Q03673 198 aa1.27□□□□□ -2.21
SHS1YDL225W PHO85P17157 305 aa1.26□□□□□ -2.21
SHS1YDL225W ATP7P30902 174 aa1.26□□□□□ -2.21
SHS1YDL225W YHL018WP38744 120 aaPredicted RBP1.26□□□□□ -2.21
SHS1YDL225W EDC3P39998 551 aaKnown RBP1.26□□□□□ -2.21
SHS1YDL225W TMA22P47089 198 aaPredicted RBP1.26□□□□□ -2.21
SHS1YDL225W YNL247WP53852 767 aaKnown RBP1.26□□□□□ -2.21
SHS1YDL225W PGA1P53896 198 aa1.26□□□□□ -2.21
SHS1YDL225W SNO1Q03144 224 aa1.26□□□□□ -2.21
SHS1YDL225W VPS71Q03433 280 aa1.26□□□□□ -2.21
SHS1YDL225W PRP11Q07350 266 aaPredicted RBP1.26□□□□□ -2.21
SHS1YDL225W COX8P04039 78 aa1.26□□□□□ -2.21
SHS1YDL225W RPS24AP0CX31 135 aaKnown RBP1.26□□□□□ -2.21
SHS1YDL225W RPS24BP0CX32 135 aaKnown RBP1.26□□□□□ -2.21
SHS1YDL225W IDP1P21954 428 aaKnown RBP1.26□□□□□ -2.21
SHS1YDL225W YNL033WP53964 284 aa1.26□□□□□ -2.21
SHS1YDL225W CWC27Q02770 301 aa1.26□□□□□ -2.21
SHS1YDL225W YMR253CQ04835 414 aa1.26□□□□□ -2.21
SHS1YDL225W MPD1Q12404 318 aaKnown RBP1.26□□□□□ -2.21
SHS1YDL225W YPR014CQ6B0W2 109 aa1.26□□□□□ -2.21
SHS1YDL225W VAR1P02381 398 aa1.25□□□□□ -2.21
SHS1YDL225W AHC2P25649 128 aa1.25□□□□□ -2.21
SHS1YDL225W YKR041WP36134 250 aa1.25□□□□□ -2.21
SHS1YDL225W SPC25P40014 221 aa1.25□□□□□ -2.21
SHS1YDL225W HYR1P40581 163 aaKnown RBP1.25□□□□□ -2.21
SHS1YDL225W YFH7P43591 353 aa1.25□□□□□ -2.21
SHS1YDL225W THG1P53215 237 aaKnown RBP1.25□□□□□ -2.21
SHS1YDL225W BRX1Q08235 291 aaKnown RBP1.25□□□□□ -2.21
SHS1YDL225W FIT2Q08906 153 aa1.25□□□□□ -2.21
SHS1YDL225W AQY2P0CD90 149 aa1.24□□□□□ -2.21
SHS1YDL225W YHL042WP38729 150 aa1.24□□□□□ -2.21
SHS1YDL225W FMP32P43557 207 aa1.24□□□□□ -2.21
SHS1YDL225W GPI14P47088 403 aaKnown RBP1.24□□□□□ -2.21
SHS1YDL225W DIG2Q03373 323 aaKnown RBP1.24□□□□□ -2.21
SHS1YDL225W YET3Q07451 203 aa1.24□□□□□ -2.21
SHS1YDL225W NSG1P38837 291 aa1.23□□□□□ -2.21
SHS1YDL225W YFL065CP43539 102 aa1.23□□□□□ -2.21
SHS1YDL225W SHH4Q06236 168 aa1.23□□□□□ -2.21
SHS1YDL225W FYV12Q08559 129 aa1.23□□□□□ -2.21
SHS1YDL225W GRE1Q08969 168 aa1.23□□□□□ -2.21
SHS1YDL225W YOR342CQ12182 319 aa1.23□□□□□ -2.21
SHS1YDL225W GCY1P14065 312 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
SHS1YDL225W ARO7P32178 256 aa1.23□□□□□ -2.21
SHS1YDL225W GSP2P32836 220 aaKnown RBP1.23□□□□□ -2.21
SHS1YDL225W SFK1P35735 353 aa1.23□□□□□ -2.21
SHS1YDL225W HPA3P39979 161 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms