RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W SHE2P36068 246 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SHR3YDL212W YBR220CP38318 560 aa1.68□□□□□ -2.14
SHR3YDL212W PDS1P40316 373 aaPredicted RBP1.68□□□□□ -2.14
SHR3YDL212W POP3P53833 195 aaPredicted RBP1.68□□□□□ -2.14
SHR3YDL212W HNT1Q04344 158 aaKnown RBP1.68□□□□□ -2.14
SHR3YDL212W ANT1Q06497 328 aa1.68□□□□□ -2.14
SHR3YDL212W YOL024WQ08172 172 aa1.68□□□□□ -2.14
SHR3YDL212W OCH1P31755 480 aa1.67□□□□□ -2.14
SHR3YDL212W ACP1P32463 125 aa1.67□□□□□ -2.14
SHR3YDL212W KDX1P36005 433 aa1.67□□□□□ -2.14
SHR3YDL212W MAK5P38112 773 aaPredicted RBP1.67□□□□□ -2.14
SHR3YDL212W OPY1P38271 328 aa1.67□□□□□ -2.14
SHR3YDL212W DER1P38307 211 aa1.67□□□□□ -2.14
SHR3YDL212W YER076CP40049 302 aa1.67□□□□□ -2.14
SHR3YDL212W YFH7P43591 353 aa1.67□□□□□ -2.14
SHR3YDL212W SBH2P52871 88 aa1.67□□□□□ -2.14
SHR3YDL212W ARO80Q04052 950 aa1.67□□□□□ -2.14
SHR3YDL212W BRX1Q08235 291 aaKnown RBP1.67□□□□□ -2.14
SHR3YDL212W UBR2Q07963 1872 aa1.67□□□□□ -2.14
SHR3YDL212W YLR236CA0A023PZG4 107 aa1.66□□□□□ -2.14
SHR3YDL212W RPL2AP0CX45 254 aaKnown RBP1.66□□□□□ -2.14
SHR3YDL212W RPL2BP0CX46 254 aaKnown RBP1.66□□□□□ -2.14
SHR3YDL212W MGT1P26188 188 aa1.66□□□□□ -2.14
SHR3YDL212W TMA19P35691 167 aaKnown RBP1.66□□□□□ -2.14
SHR3YDL212W SRP102P36057 244 aaPredicted RBP1.66□□□□□ -2.14
SHR3YDL212W YKR041WP36134 250 aa1.66□□□□□ -2.14
SHR3YDL212W YBR209WP38311 105 aa1.66□□□□□ -2.14
SHR3YDL212W VMA22P38784 181 aa1.66□□□□□ -2.14
SHR3YDL212W RPL13BP40212 199 aaKnown RBP1.66□□□□□ -2.14
SHR3YDL212W KNH1P50112 268 aa1.66□□□□□ -2.14
SHR3YDL212W SAY1P53324 424 aa1.66□□□□□ -2.14
SHR3YDL212W YMR315WQ04869 349 aaKnown RBP1.66□□□□□ -2.14
SHR3YDL212W YLR050CQ12155 161 aaKnown RBP1.66□□□□□ -2.14
SHR3YDL212W PEX11Q12462 236 aa1.66□□□□□ -2.14
SHR3YDL212W RPL13AQ12690 199 aaPredicted RBP1.66□□□□□ -2.14
SHR3YDL212W MBF1O14467 151 aaKnown RBP1.65□□□□□ -2.15
SHR3YDL212W RPS24AP0CX31 135 aaKnown RBP1.65□□□□□ -2.15
SHR3YDL212W RPS24BP0CX32 135 aaKnown RBP1.65□□□□□ -2.15
SHR3YDL212W TFC1P32367 649 aa1.65□□□□□ -2.15
SHR3YDL212W UPS2P35200 230 aa1.65□□□□□ -2.15
SHR3YDL212W SOK1P40317 901 aa1.65□□□□□ -2.15
SHR3YDL212W ERJ5P43613 295 aaPredicted RBP1.65□□□□□ -2.15
SHR3YDL212W ARP3P47117 449 aaKnown RBP1.65□□□□□ -2.15
SHR3YDL212W MPC3P53311 146 aa1.65□□□□□ -2.15
SHR3YDL212W YDL085C-AQ3E7B7 68 aaKnown RBP1.65□□□□□ -2.15
SHR3YDL212W ODC2Q99297 307 aa1.65□□□□□ -2.15
SHR3YDL212W PET20Q99373 253 aa1.65□□□□□ -2.15
SHR3YDL212W YCR090CP25654 182 aaKnown RBP1.64□□□□□ -2.15
SHR3YDL212W YAP3P38749 330 aa1.64□□□□□ -2.15
SHR3YDL212W EDC3P39998 551 aaKnown RBP1.64□□□□□ -2.15
SHR3YDL212W SKI6P46948 246 aaPredicted RBP1.64□□□□□ -2.15
SHR3YDL212W LSM1P47017 172 aaKnown RBP1.64□□□□□ -2.15
SHR3YDL212W JAC1P53193 184 aa1.64□□□□□ -2.15
SHR3YDL212W NQM1P53228 333 aaPredicted RBP1.64□□□□□ -2.15
SHR3YDL212W YNL184CP53876 108 aa1.64□□□□□ -2.15
SHR3YDL212W AIM34Q03673 198 aa1.64□□□□□ -2.15
SHR3YDL212W SPC2Q04969 178 aa1.64□□□□□ -2.15
SHR3YDL212W YLR053CQ12026 108 aa1.64□□□□□ -2.15
SHR3YDL212W POR1P04840 283 aaKnown RBP1.63□□□□□ -2.15
SHR3YDL212W CMD1P06787 147 aaKnown RBP1.63□□□□□ -2.15
SHR3YDL212W SNF4P12904 322 aa1.63□□□□□ -2.15
SHR3YDL212W SPO13P23624 291 aa1.63□□□□□ -2.15
SHR3YDL212W SEC14P24280 304 aaKnown RBP1.63□□□□□ -2.15
SHR3YDL212W CLG1P35190 452 aa1.63□□□□□ -2.15
SHR3YDL212W PAN3P36102 679 aaPredicted RBP1.63□□□□□ -2.15
SHR3YDL212W POP7P38291 140 aa1.63□□□□□ -2.15
SHR3YDL212W YEA4P40004 342 aa1.63□□□□□ -2.15
SHR3YDL212W UBC12P52491 188 aa1.63□□□□□ -2.15
SHR3YDL212W MAK3Q03503 176 aa1.63□□□□□ -2.15
SHR3YDL212W PLP1Q04004 230 aa1.63□□□□□ -2.15
SHR3YDL212W NSL1Q12143 216 aa1.63□□□□□ -2.15
SHR3YDL212W RDI1Q12434 202 aa1.63□□□□□ -2.15
SHR3YDL212W GPA2P10823 449 aa1.62□□□□□ -2.15
SHR3YDL212W PET54P10834 293 aa1.62□□□□□ -2.15
SHR3YDL212W SEC11P15367 167 aa1.62□□□□□ -2.15
SHR3YDL212W FPR1P20081 114 aaKnown RBP1.62□□□□□ -2.15
SHR3YDL212W AHC2P25649 128 aa1.62□□□□□ -2.15
SHR3YDL212W NVJ1P38881 321 aa1.62□□□□□ -2.15
SHR3YDL212W SER2P42941 309 aa1.62□□□□□ -2.15
SHR3YDL212W FMP32P43557 207 aa1.62□□□□□ -2.15
SHR3YDL212W YDC1Q02896 317 aa1.62□□□□□ -2.15
SHR3YDL212W YDR476CQ03362 224 aa1.62□□□□□ -2.15
SHR3YDL212W MZM1Q03429 123 aaPredicted RBP1.62□□□□□ -2.15
SHR3YDL212W CUE4Q04201 117 aaPredicted RBP1.62□□□□□ -2.15
SHR3YDL212W DYN3Q04949 312 aa1.62□□□□□ -2.15
SHR3YDL212W SHH4Q06236 168 aa1.62□□□□□ -2.15
SHR3YDL212W YPR127WQ06494 345 aa1.62□□□□□ -2.15
SHR3YDL212W RIO1Q12196 484 aaKnown RBP1.62□□□□□ -2.15
SHR3YDL212W CYR1P08678 2026 aaKnown RBP1.62□□□□□ -2.15
SHR3YDL212W YCR023CP25351 611 aa1.61□□□□□ -2.15
SHR3YDL212W BUB2P26448 306 aaPredicted RBP1.61□□□□□ -2.15
SHR3YDL212W ARO7P32178 256 aa1.61□□□□□ -2.15
SHR3YDL212W FMP23P38231 175 aa1.61□□□□□ -2.15
SHR3YDL212W GIM4P40005 111 aaKnown RBP1.61□□□□□ -2.15
SHR3YDL212W YJR111CP47148 283 aaKnown RBP1.61□□□□□ -2.15
SHR3YDL212W ARO8P53090 500 aaKnown RBP1.61□□□□□ -2.15
SHR3YDL212W MPA43P53583 542 aaPredicted RBP1.61□□□□□ -2.15
SHR3YDL212W DGA1Q08650 418 aa1.61□□□□□ -2.15
SHR3YDL212W RAD28Q12021 506 aa1.61□□□□□ -2.15
SHR3YDL212W QCR8P08525 94 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms