RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YND1	P40009	630 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	RPA43	P46669	326 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	YGR035C	P53222	116 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	OGG1	P53397	376 aa	Predicted RBP	3.49	□□□□□ -1.85
VMA1	YDL185W	YDR391C	Q04170	232 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	TRI1	Q05024	226 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	CNL1	Q06333	122 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	YLR050C	Q12155	161 aa	Known RBP	3.49	□□□□□ -1.85
VMA1	YDL185W	STE18	P18852	110 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	DAL82	P21705	255 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	OCH1	P31755	480 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
VMA1	YDL185W	RPB11	P38902	120 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	SNU13	P39990	126 aa	Known RBP	3.49	□□□□□ -1.85
VMA1	YDL185W	SEC24	P40482	926 aa	Known RBP	3.49	□□□□□ -1.85
VMA1	YDL185W	SMK1	P41808	388 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	MRPL51	Q06090	140 aa	Predicted RBP	3.49	□□□□□ -1.85
VMA1	YDL185W	WIP1	Q2V2P8	89 aa		3.49	□□□□□ -1.85
VMA1	YDL185W	MRP49	P32388	137 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	SRP14	P38985	146 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	YIL161W	P40449	235 aa	Known RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	HAC1	P41546	238 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	ERJ5	P43613	295 aa	Predicted RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	YAR1	P46683	200 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	YJR015W	P47090	510 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	ERG26	P53199	349 aa	Known RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	YMR090W	Q04304	227 aa	Known RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	ATO3	Q12359	275 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	SCS22	Q6Q595	175 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	MKK2	P32491	506 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	ECM33	P38248	429 aa	Known RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	FMO1	P38866	432 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	BAT1	P38891	393 aa	Known RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	YPS6	P40583	537 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	CRH1	P53301	507 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	NAT3	Q06504	195 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	BSC6	Q08280	497 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	ISA2	Q12425	185 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	YCR075W-A	Q3E830	75 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	COX1	P00401	534 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	GCS1	P35197	352 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	SWD2	P36104	329 aa	Predicted RBP	3.48	□□□□□ -1.85
VMA1	YDL185W	PMT3	P47190	753 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	YDL183C	P48569	320 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	TSA2	Q04120	196 aa		3.48	□□□□□ -1.85
VMA1	YDL185W	PET191	Q02772	108 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	YPR174C	Q06616	221 aa	Predicted RBP	3.47	□□□□□ -1.85
VMA1	YDL185W	YPQ1	Q12010	308 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	NPC2	Q12408	173 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	YLL053C	P0CD98	152 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	NNK1	P36003	928 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	PAM17	P36147	197 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	YKR070W	P36151	352 aa	Known RBP	3.47	□□□□□ -1.85
VMA1	YDL185W	POP2	P39008	433 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	GPP2	P40106	250 aa	Known RBP	3.47	□□□□□ -1.85
VMA1	YDL185W	GPI2	P46961	280 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	MPP6	P53725	186 aa	Predicted RBP	3.47	□□□□□ -1.85
VMA1	YDL185W	YPL077C	Q02831	240 aa		3.47	□□□□□ -1.85
VMA1	YDL185W	YMR178W	Q03219	274 aa	Known RBP	3.47	□□□□□ -1.85
VMA1	YDL185W	RPB8	P20436	146 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	NPR1	P22211	790 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	MEK1	P24719	497 aa	Predicted RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	GPX1	P36014	167 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	FYV4	P38783	130 aa	Predicted RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	YGR269W	P40326	108 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	XPT1	P47165	209 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	PDR17	P53844	350 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	LDS2	Q08218	356 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	RPL1A	P0CX43	217 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	RPL1B	P0CX44	217 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	AIM17	P23180	465 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	SRP21	P32342	167 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YOR062C	P36025	268 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YNL208W	P40159	199 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	MSL1	P40567	111 aa	Predicted RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	COX18	P53239	316 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	TPC1	P53257	314 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YNR040W	P53736	256 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	LPP1	Q04396	274 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	ARC18	Q05933	178 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	YOR105W	Q08504	108 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	USV1	Q12132	391 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YOS1	Q3E834	85 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	RPS22A	P0C0W1	130 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	SPT15	P13393	240 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	PPA2	P28239	310 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YKL107W	P34251	309 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	SOR1	P35497	357 aa	Known RBP	3.46	□□□□□ -1.86
VMA1	YDL185W	TAE1	P38340	232 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	VEL1	P53058	206 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	CPD1	P53314	239 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	MRPL1	Q04599	285 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	SOR2	Q07786	357 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YPL264C	Q08980	353 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	YLR363W-A	Q3E747	85 aa		3.46	□□□□□ -1.86
VMA1	YDL185W	SOD1	P00445	154 aa	Known RBP	3.45	□□□□□ -1.86
VMA1	YDL185W	RFA3	P26755	122 aa	Known RBP	3.45	□□□□□ -1.86
VMA1	YDL185W	DUT1	P33317	147 aa		3.45	□□□□□ -1.86
VMA1	YDL185W	FRM2	P37261	193 aa		3.45	□□□□□ -1.86
VMA1	YDL185W	BRR6	P53062	197 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 497 ms