RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W DTD1Q07648 150 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W CPR4P25334 318 aa1.28□□□□□ -2.2
TRM3YDL112W TRR1P29509 319 aaKnown RBP1.28□□□□□ -2.2
TRM3YDL112W FUN26P31381 517 aa1.28□□□□□ -2.2
TRM3YDL112W FPR2P32472 135 aa1.28□□□□□ -2.2
TRM3YDL112W SWD3P38123 315 aa1.28□□□□□ -2.2
TRM3YDL112W YJR056CP47115 236 aa1.28□□□□□ -2.2
TRM3YDL112W ALG9P53868 555 aaKnown RBP1.28□□□□□ -2.2
TRM3YDL112W YDR114CQ04597 100 aa1.28□□□□□ -2.2
TRM3YDL112W EAF3Q12432 401 aa1.28□□□□□ -2.2
TRM3YDL112W VMA8P32610 256 aaKnown RBP1.28□□□□□ -2.2
TRM3YDL112W EGD2P38879 174 aaKnown RBP1.28□□□□□ -2.2
TRM3YDL112W YJL218WP40892 196 aaKnown RBP1.28□□□□□ -2.2
TRM3YDL112W GPI14P47088 403 aaKnown RBP1.28□□□□□ -2.2
TRM3YDL112W SSU72P53538 206 aaPredicted RBP1.28□□□□□ -2.2
TRM3YDL112W MDM36Q06820 579 aa1.28□□□□□ -2.2
TRM3YDL112W ATO3Q12359 275 aa1.28□□□□□ -2.2
TRM3YDL112W OLE1P21147 510 aaKnown RBP1.28□□□□□ -2.21
TRM3YDL112W YKL063CP35725 167 aa1.28□□□□□ -2.21
TRM3YDL112W RPL9BP51401 191 aaKnown RBP1.28□□□□□ -2.21
TRM3YDL112W SNZ1Q03148 297 aa1.28□□□□□ -2.21
TRM3YDL112W LPP1Q04396 274 aa1.28□□□□□ -2.21
TRM3YDL112W MRPL35Q06678 367 aa1.28□□□□□ -2.21
TRM3YDL112W RPL9AP05738 191 aaKnown RBP1.27□□□□□ -2.21
TRM3YDL112W MIR1P23641 311 aaKnown RBP1.27□□□□□ -2.21
TRM3YDL112W YPI1P43587 155 aa1.27□□□□□ -2.21
TRM3YDL112W YJR011CP47086 261 aaPredicted RBP1.27□□□□□ -2.21
TRM3YDL112W ILM1P47155 203 aa1.27□□□□□ -2.21
TRM3YDL112W PEX10Q05568 337 aa1.27□□□□□ -2.21
TRM3YDL112W ATG17Q06410 417 aa1.27□□□□□ -2.21
TRM3YDL112W YOR385WQ08909 290 aa1.27□□□□□ -2.21
TRM3YDL112W YPL199CQ08954 240 aa1.27□□□□□ -2.21
TRM3YDL112W RPL24AP04449 155 aaKnown RBP1.27□□□□□ -2.21
TRM3YDL112W VMA5P31412 392 aaKnown RBP1.27□□□□□ -2.21
TRM3YDL112W CMC1P36064 111 aa1.27□□□□□ -2.21
TRM3YDL112W MRPL27P36526 146 aaPredicted RBP1.27□□□□□ -2.21
TRM3YDL112W UIP3P39547 235 aa1.27□□□□□ -2.21
TRM3YDL112W CTF19Q02732 369 aa1.27□□□□□ -2.21
TRM3YDL112W HIS3P06633 220 aa1.27□□□□□ -2.21
TRM3YDL112W SHE2P36068 246 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
TRM3YDL112W YKR045CP36138 183 aa1.27□□□□□ -2.21
TRM3YDL112W MBA1P38300 278 aa1.27□□□□□ -2.21
TRM3YDL112W RTC3P38804 111 aaPredicted RBP1.27□□□□□ -2.21
TRM3YDL112W YHR138CP38841 114 aaPredicted RBP1.27□□□□□ -2.21
TRM3YDL112W PCL6P40038 420 aa1.27□□□□□ -2.21
TRM3YDL112W YGR210CP42942 411 aa1.27□□□□□ -2.21
TRM3YDL112W AGX1P43567 385 aa1.27□□□□□ -2.21
TRM3YDL112W ATG27P46989 271 aa1.27□□□□□ -2.21
TRM3YDL112W ATG39Q06159 398 aa1.27□□□□□ -2.21
TRM3YDL112W YPS3Q12303 508 aa1.27□□□□□ -2.21
TRM3YDL112W ATG31Q12421 196 aa1.27□□□□□ -2.21
TRM3YDL112W BUD23P25627 275 aaPredicted RBP1.26□□□□□ -2.21
TRM3YDL112W NPL6P32832 435 aa1.26□□□□□ -2.21
TRM3YDL112W GEP4P38812 185 aa1.26□□□□□ -2.21
TRM3YDL112W SYG1P40528 902 aa1.26□□□□□ -2.21
TRM3YDL112W BXI1P48558 297 aa1.26□□□□□ -2.21
TRM3YDL112W YGL262WP53054 175 aa1.26□□□□□ -2.21
TRM3YDL112W TOS8P53147 276 aa1.26□□□□□ -2.21
TRM3YDL112W MSO1P53604 210 aaKnown RBP1.26□□□□□ -2.21
TRM3YDL112W YMR252CQ04814 134 aa1.26□□□□□ -2.21
TRM3YDL112W MED4Q12343 284 aa1.26□□□□□ -2.21
TRM3YDL112W YGL258W-AQ3E740 77 aa1.26□□□□□ -2.21
TRM3YDL112W YEL009C-AA0A023PZF2 135 aa1.26□□□□□ -2.21
TRM3YDL112W URA6P15700 204 aa1.26□□□□□ -2.21
TRM3YDL112W FMT1P32785 401 aa1.26□□□□□ -2.21
TRM3YDL112W VAM7P32912 316 aa1.26□□□□□ -2.21
TRM3YDL112W ECM4P36156 370 aa1.26□□□□□ -2.21
TRM3YDL112W SLM4P38247 162 aa1.26□□□□□ -2.21
TRM3YDL112W DOG2P38773 246 aa1.26□□□□□ -2.21
TRM3YDL112W DOG1P38774 246 aa1.26□□□□□ -2.21
TRM3YDL112W TDA4P47153 279 aa1.26□□□□□ -2.21
TRM3YDL112W DOC1P53068 250 aa1.26□□□□□ -2.21
TRM3YDL112W ARO8P53090 500 aaKnown RBP1.26□□□□□ -2.21
TRM3YDL112W CAB5Q03941 241 aa1.26□□□□□ -2.21
TRM3YDL112W YLR283WQ05867 314 aa1.26□□□□□ -2.21
TRM3YDL112W SYM1Q06563 197 aa1.26□□□□□ -2.21
TRM3YDL112W NOP1P15646 327 aaKnown RBP1.26□□□□□ -2.21
TRM3YDL112W YPT53P36019 220 aa1.26□□□□□ -2.21
TRM3YDL112W SRL3P36167 246 aa1.26□□□□□ -2.21
TRM3YDL112W RBL2P48606 106 aaKnown RBP1.26□□□□□ -2.21
TRM3YDL112W FYV6P53913 173 aa1.26□□□□□ -2.21
TRM3YDL112W TSA2Q04120 196 aa1.26□□□□□ -2.21
TRM3YDL112W GPN3Q06543 272 aa1.26□□□□□ -2.21
TRM3YDL112W MCH1Q07376 486 aa1.26□□□□□ -2.21
TRM3YDL112W NDE2Q07500 545 aa1.26□□□□□ -2.21
TRM3YDL112W POP5P28005 173 aa1.26□□□□□ -2.21
TRM3YDL112W HOM6P31116 359 aaKnown RBP1.26□□□□□ -2.21
TRM3YDL112W ERG3P32353 365 aa1.26□□□□□ -2.21
TRM3YDL112W ECM25P32525 599 aa1.26□□□□□ -2.21
TRM3YDL112W UPS2P35200 230 aa1.26□□□□□ -2.21
TRM3YDL112W YPC1P38298 316 aa1.26□□□□□ -2.21
TRM3YDL112W FMC1P40491 155 aa1.26□□□□□ -2.21
TRM3YDL112W COX12Q01519 83 aa1.26□□□□□ -2.21
TRM3YDL112W YPL162CQ12042 273 aa1.26□□□□□ -2.21
TRM3YDL112W YLR099W-AQ3E798 87 aa1.26□□□□□ -2.21
TRM3YDL112W CYC3P06182 269 aa1.25□□□□□ -2.21
TRM3YDL112W MRS3P10566 314 aa1.25□□□□□ -2.21
TRM3YDL112W MRPL38P35996 138 aaPredicted RBP1.25□□□□□ -2.21
TRM3YDL112W ALG13P53178 202 aa1.25□□□□□ -2.21
TRM3YDL112W FSH2Q05015 223 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms