RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	INH1	P01097	85 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	YCL042W	P25572	119 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	YKL187C	P34231	750 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	YKL102C	P34249	101 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	YKL071W	P36086	256 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	PRY2	P36110	329 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	MIX23	P38162	196 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	UMP1	P38293	148 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	DOG1	P38774	246 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	YIL161W	P40449	235 aa	Known RBP	4.66	□□□□□ -1.66
RPT2	YDL007W	XBP1	P40489	647 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	HIT1	P46973	164 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	THG1	P53215	237 aa	Known RBP	4.66	□□□□□ -1.66
RPT2	YDL007W	RHO3	Q00245	231 aa	Known RBP	4.66	□□□□□ -1.66
RPT2	YDL007W	YLR030W	Q07967	263 aa		4.66	□□□□□ -1.66
RPT2	YDL007W	CTA1	P15202	515 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	STE18	P18852	110 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	SPO13	P23624	291 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	AHT1	P29589	182 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
RPT2	YDL007W	PMU1	P36069	295 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	FIG1	P38224	298 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	RPF1	P38805	295 aa	Known RBP	4.65	□□□□□ -1.67
RPT2	YDL007W	ANS1	P38832	159 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	YEL057C	P39983	233 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	YER134C	P40081	178 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	TTI2	P47168	421 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	MIC26	P50087	233 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	RPN14	P53196	417 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	APS2	Q00381	147 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	GIS1	Q03833	894 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	HRI1	Q05905	244 aa	Known RBP	4.65	□□□□□ -1.67
RPT2	YDL007W	MRPL51	Q06090	140 aa	Predicted RBP	4.65	□□□□□ -1.67
RPT2	YDL007W	ATG39	Q06159	398 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	ATG10	Q07879	167 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	USV1	Q12132	391 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	RDL1	Q12305	139 aa	Known RBP	4.65	□□□□□ -1.67
RPT2	YDL007W	PRR2	Q12310	699 aa		4.65	□□□□□ -1.67
RPT2	YDL007W	MES1	P00958	751 aa	Known RBP	4.64	□□□□□ -1.67
RPT2	YDL007W	OPI3	P05375	206 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	URA5	P13298	226 aa	Known RBP	4.64	□□□□□ -1.67
RPT2	YDL007W	PDE1	P22434	369 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	YGL010W	P25338	174 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	PAU16	P35994	123 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	YOR062C	P36025	268 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	DAD2	P36162	133 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	AME1	P38313	324 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	YJL028W	P47062	111 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	ERG25	P53045	309 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	YGR017W	P53210	297 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	SSU72	P53538	206 aa	Predicted RBP	4.64	□□□□□ -1.67
RPT2	YDL007W	RNH201	P53942	307 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	DAD3	P69850	94 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	IZH1	Q03419	316 aa		4.64	□□□□□ -1.67
RPT2	YDL007W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
RPT2	YDL007W	MDH2	P22133	377 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	SCO1	P23833	295 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	ARO2	P28777	376 aa	Known RBP	4.63	□□□□□ -1.67
RPT2	YDL007W	MNS1	P32906	549 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	MTR2	P34232	184 aa	Known RBP	4.63	□□□□□ -1.67
RPT2	YDL007W	RPB11	P38902	120 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	PAC2	P39937	518 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	ERJ5	P43613	295 aa	Predicted RBP	4.63	□□□□□ -1.67
RPT2	YDL007W	VEL1	P53058	206 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	MSO1	P53604	210 aa	Known RBP	4.63	□□□□□ -1.67
RPT2	YDL007W	DUG3	P53871	357 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	RPL21A	Q02753	160 aa	Known RBP	4.63	□□□□□ -1.67
RPT2	YDL007W	PET191	Q02772	108 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	CSM4	Q08955	156 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	HUT1	Q12520	339 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	YLR111W	Q12528	110 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	RPL21B	Q12672	160 aa	Known RBP	4.63	□□□□□ -1.67
RPT2	YDL007W	SLO1	Q3E784	85 aa		4.63	□□□□□ -1.67
RPT2	YDL007W	HFA1	P32874	2273 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	SEC16	P48415	2195 aa	Known RBP	4.62	□□□□□ -1.67
RPT2	YDL007W	FMP49	A0A023PZB3	126 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	MBF1	O14467	151 aa	Known RBP	4.62	□□□□□ -1.67
RPT2	YDL007W	YLL053C	P0CD98	152 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	NOP1	P15646	327 aa	Known RBP	4.62	□□□□□ -1.67
RPT2	YDL007W	ERG2	P32352	222 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	SRB5	P32585	307 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	TRM7	P38238	310 aa	Known RBP	4.62	□□□□□ -1.67
RPT2	YDL007W	SNO3	P43544	222 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	TPC1	P53257	314 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	YMR090W	Q04304	227 aa	Known RBP	4.62	□□□□□ -1.67
RPT2	YDL007W	RPC11	Q04307	110 aa	Predicted RBP	4.62	□□□□□ -1.67
RPT2	YDL007W	YML096W	Q04489	525 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	GIM5	Q04493	163 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	CTS2	Q06350	511 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	YOL024W	Q08172	172 aa		4.62	□□□□□ -1.67
RPT2	YDL007W	YDR157W	A0A023PZE8	133 aa		4.61	□□□□□ -1.67
RPT2	YDL007W	RPL20A	P0CX23	172 aa	Known RBP	4.61	□□□□□ -1.67
RPT2	YDL007W	RPL20B	P0CX24	172 aa	Predicted RBP	4.61	□□□□□ -1.67
RPT2	YDL007W	RPL1A	P0CX43	217 aa	Known RBP	4.61	□□□□□ -1.67
RPT2	YDL007W	RPL1B	P0CX44	217 aa	Known RBP	4.61	□□□□□ -1.67
RPT2	YDL007W	RPB8	P20436	146 aa		4.61	□□□□□ -1.67
RPT2	YDL007W	RFA3	P26755	122 aa	Known RBP	4.61	□□□□□ -1.67
RPT2	YDL007W	AFG1	P32317	509 aa		4.61	□□□□□ -1.67
RPT2	YDL007W	SPS18	P32572	300 aa		4.61	□□□□□ -1.67
RPT2	YDL007W	SWD2	P36104	329 aa	Predicted RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms