RNA–Protein interactions for RNA: YCR040W

MATALPHA1, Transcript of Transcriptional co-activator that regulates mating-type-specific genes, yeastyeast

Gene MATALPHA1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA1YCR040W YDL180WQ12301 547 aa3.78□□□□□ -1.8
MATALPHA1YCR040W PET54P10834 293 aa3.77□□□□□ -1.81
MATALPHA1YCR040W PAN3P36102 679 aaPredicted RBP3.77□□□□□ -1.81
MATALPHA1YCR040W POP7P38291 140 aa3.77□□□□□ -1.81
MATALPHA1YCR040W YBR285WP38354 144 aa3.77□□□□□ -1.81
MATALPHA1YCR040W GPI14P47088 403 aaKnown RBP3.77□□□□□ -1.81
MATALPHA1YCR040W YPR195CQ06594 109 aa3.77□□□□□ -1.81
MATALPHA1YCR040W DGK1Q12382 290 aa3.77□□□□□ -1.81
MATALPHA1YCR040W YML100W-AQ8TGT0 57 aa3.77□□□□□ -1.81
MATALPHA1YCR040W YCR023CP25351 611 aa3.76□□□□□ -1.81
MATALPHA1YCR040W PKR1Q03880 122 aaKnown RBP3.76□□□□□ -1.81
MATALPHA1YCR040W SPC2Q04969 178 aa3.76□□□□□ -1.81
MATALPHA1YCR040W CCH1P50077 2039 aa3.75□□□□□ -1.81
MATALPHA1YCR040W TTI2P47168 421 aa3.75□□□□□ -1.81
MATALPHA1YCR040W YGL101WP53144 215 aa3.75□□□□□ -1.81
MATALPHA1YCR040W YGR219WP53307 113 aa3.75□□□□□ -1.81
MATALPHA1YCR040W YDR274CP87283 123 aa3.75□□□□□ -1.81
MATALPHA1YCR040W SPG3Q04398 127 aaPredicted RBP3.75□□□□□ -1.81
MATALPHA1YCR040W YOL014WQ08110 124 aa3.75□□□□□ -1.81
MATALPHA1YCR040W YLR046CQ12253 270 aa3.75□□□□□ -1.81
MATALPHA1YCR040W YAR023CD6VPM8 179 aa3.74□□□□□ -1.81
MATALPHA1YCR040W MIG1P27705 504 aa3.74□□□□□ -1.81
MATALPHA1YCR040W NUF2P33895 451 aa3.74□□□□□ -1.81
MATALPHA1YCR040W SLM6P38343 150 aa3.74□□□□□ -1.81
MATALPHA1YCR040W YHR180WP38868 163 aa3.74□□□□□ -1.81
MATALPHA1YCR040W FCY21P40039 528 aa3.74□□□□□ -1.81
MATALPHA1YCR040W GIS2P53849 153 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
MATALPHA1YCR040W TAF2P23255 1407 aa3.73□□□□□ -1.81
MATALPHA1YCR040W IDP1P21954 428 aaKnown RBP3.73□□□□□ -1.81
MATALPHA1YCR040W YET1P35723 206 aa3.73□□□□□ -1.81
MATALPHA1YCR040W KDX1P36005 433 aa3.73□□□□□ -1.81
MATALPHA1YCR040W DOC1P53068 250 aa3.73□□□□□ -1.81
MATALPHA1YCR040W LSM3P57743 89 aaKnown RBP3.73□□□□□ -1.81
MATALPHA1YCR040W VPS71Q03433 280 aa3.73□□□□□ -1.81
MATALPHA1YCR040W YPR096CO13587 100 aa3.72□□□□□ -1.81
MATALPHA1YCR040W UBC8P28263 218 aa3.72□□□□□ -1.81
MATALPHA1YCR040W SHE2P36068 246 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
MATALPHA1YCR040W GIM4P40005 111 aaKnown RBP3.72□□□□□ -1.81
MATALPHA1YCR040W RPL33BP41056 107 aaKnown RBP3.72□□□□□ -1.81
MATALPHA1YCR040W YFL019CP43576 117 aa3.72□□□□□ -1.81
MATALPHA1YCR040W TIM13P53299 105 aa3.72□□□□□ -1.81
MATALPHA1YCR040W RAV2Q03956 351 aa3.72□□□□□ -1.81
MATALPHA1YCR040W ATO3Q12359 275 aa3.72□□□□□ -1.81
MATALPHA1YCR040W UBI4P0CG63 381 aaKnown RBP3.71□□□□□ -1.82
MATALPHA1YCR040W PEX34P25584 144 aa3.71□□□□□ -1.82
MATALPHA1YCR040W SPO73P40031 143 aa3.71□□□□□ -1.82
MATALPHA1YCR040W APQ12P40532 138 aa3.71□□□□□ -1.82
MATALPHA1YCR040W CIS3P47001 227 aa3.71□□□□□ -1.82
MATALPHA1YCR040W MRPS8Q03799 155 aa3.71□□□□□ -1.82
MATALPHA1YCR040W THI74Q04083 370 aa3.71□□□□□ -1.82
MATALPHA1YCR040W NAT3Q06504 195 aa3.71□□□□□ -1.82
MATALPHA1YCR040W FSF1Q12029 327 aaKnown RBP3.71□□□□□ -1.82
MATALPHA1YCR040W DAS2Q12084 232 aa3.71□□□□□ -1.82
MATALPHA1YCR040W YOR1P53049 1477 aa3.71□□□□□ -1.82
MATALPHA1YCR040W FKS1P38631 1876 aaKnown RBP3.71□□□□□ -1.82
MATALPHA1YCR040W VTC1P40046 129 aaRIP-Chip data3.7□□□□□ -1.82not detected
MATALPHA1YCR040W DLS1P40366 167 aa3.7□□□□□ -1.82
MATALPHA1YCR040W GLR1P41921 483 aaKnown RBP3.7□□□□□ -1.82
MATALPHA1YCR040W YGR042WP53227 271 aa3.7□□□□□ -1.82
MATALPHA1YCR040W HHT1P61830 136 aa3.7□□□□□ -1.82
MATALPHA1YCR040W YMR295CQ03559 197 aa3.7□□□□□ -1.82
MATALPHA1YCR040W UPS2P35200 230 aa3.69□□□□□ -1.82
MATALPHA1YCR040W IPI1P38803 334 aaPredicted RBP3.69□□□□□ -1.82
MATALPHA1YCR040W SLM2P53955 656 aa3.69□□□□□ -1.82
MATALPHA1YCR040W CLB6P32943 380 aa3.68□□□□□ -1.82
MATALPHA1YCR040W ERV15P38312 142 aa3.68□□□□□ -1.82
MATALPHA1YCR040W EAF6P47128 113 aa3.68□□□□□ -1.82
MATALPHA1YCR040W DAD3P69850 94 aa3.68□□□□□ -1.82
MATALPHA1YCR040W YMR099CQ03161 297 aaKnown RBP3.68□□□□□ -1.82
MATALPHA1YCR040W YPR202WQ08993 238 aa3.68□□□□□ -1.82
MATALPHA1YCR040W YOR214CQ12282 236 aa3.68□□□□□ -1.82
MATALPHA1YCR040W POR1P04840 283 aaKnown RBP3.67□□□□□ -1.82
MATALPHA1YCR040W PEX4P29340 183 aa3.67□□□□□ -1.82
MATALPHA1YCR040W ERJ5P43613 295 aaPredicted RBP3.67□□□□□ -1.82
MATALPHA1YCR040W YJL144WP47009 104 aa3.67□□□□□ -1.82
MATALPHA1YCR040W YJR146WP47174 117 aa3.67□□□□□ -1.82
MATALPHA1YCR040W RBL2P48606 106 aaKnown RBP3.67□□□□□ -1.82
MATALPHA1YCR040W SOL1P50278 321 aa3.67□□□□□ -1.82
MATALPHA1YCR040W SHH3Q04487 196 aa3.67□□□□□ -1.82
MATALPHA1YCR040W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
MATALPHA1YCR040W EMC6Q12431 108 aa3.67□□□□□ -1.82
MATALPHA1YCR040W ATG40Q99325 256 aa3.67□□□□□ -1.82
MATALPHA1YCR040W RPL2AP0CX45 254 aaKnown RBP3.66□□□□□ -1.82
MATALPHA1YCR040W RPL2BP0CX46 254 aaKnown RBP3.66□□□□□ -1.82
MATALPHA1YCR040W STP22P25604 385 aa3.66□□□□□ -1.82
MATALPHA1YCR040W SDH4P37298 181 aa3.66□□□□□ -1.82
MATALPHA1YCR040W NSA2P40078 261 aaKnown RBP3.66□□□□□ -1.82
MATALPHA1YCR040W TIR3P40552 269 aa3.66□□□□□ -1.82
MATALPHA1YCR040W CUP9P41817 306 aa3.66□□□□□ -1.82
MATALPHA1YCR040W YGL204CP53089 101 aa3.66□□□□□ -1.82
MATALPHA1YCR040W YNR062CP53748 327 aa3.66□□□□□ -1.82
MATALPHA1YCR040W RDS3Q06835 107 aaPredicted RBP3.66□□□□□ -1.82
MATALPHA1YCR040W YPD1Q07688 167 aa3.66□□□□□ -1.82
MATALPHA1YCR040W PRM7Q12459 698 aa3.66□□□□□ -1.82
MATALPHA1YCR040W NSP1P14907 823 aaKnown RBP3.65□□□□□ -1.83
MATALPHA1YCR040W GRX5Q02784 150 aa3.65□□□□□ -1.83
MATALPHA1YCR040W VPS68Q12016 184 aa3.65□□□□□ -1.83
MATALPHA1YCR040W YDL012CQ12489 107 aa3.65□□□□□ -1.83
MATALPHA1YCR040W RPL30P14120 105 aaKnown RBP3.64□□□□□ -1.83
MATALPHA1YCR040W SVP26P38869 228 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms