RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP43	YCR035C	YJL118W	P47022	219 aa		6.13	□□□□□ -1.43
RRP43	YCR035C	SNX4	P47057	423 aa		6.13	□□□□□ -1.43
RRP43	YCR035C	YMR090W	Q04304	227 aa	Known RBP	6.13	□□□□□ -1.43
RRP43	YCR035C	HOF1	Q05080	669 aa		6.13	□□□□□ -1.43
RRP43	YCR035C	AIM45	Q12480	344 aa	Known RBP	6.13	□□□□□ -1.43
RRP43	YCR035C	COA2	Q3E823	68 aa		6.13	□□□□□ -1.43
RRP43	YCR035C	VPS63	O13549	108 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	URA2	P07259	2214 aa	Known RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	EMP24	P32803	203 aa	Known RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	CBT1	P36038	271 aa	Predicted RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	ASP1	P38986	381 aa	Predicted RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	GCV3	P39726	170 aa	Predicted RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	LSM4	P40070	187 aa	Known RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	ARP3	P47117	449 aa	Known RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	RPL9B	P51401	191 aa	Known RBP	6.12	□□□□□ -1.43
RRP43	YCR035C	APJ1	P53940	528 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	TIM44	Q01852	431 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	EST3	Q03096	181 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	FSH2	Q05015	223 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	AEP3	Q12089	606 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	YPR071W	Q12346	211 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	ATG31	Q12421	196 aa		6.12	□□□□□ -1.43
RRP43	YCR035C	URA5	P13298	226 aa	Known RBP	6.11	□□□□□ -1.43
RRP43	YCR035C	RPD3	P32561	433 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	SPS18	P32572	300 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	PMU1	P36069	295 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	SYG1	P40528	902 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	YJR056C	P47115	236 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	SRB7	P47822	140 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	BUL1	P48524	976 aa		6.11	□□□□□ -1.43
RRP43	YCR035C	ADH6	Q04894	360 aa	Known RBP	6.11	□□□□□ -1.43
RRP43	YCR035C	YBR085C-A	O43137	85 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	ECM31	P38122	312 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	SLM6	P38343	150 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	PEX7	P39108	375 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	SIT1	P39980	628 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	CRH1	P53301	507 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	MIX17	Q03667	156 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	YPL264C	Q08980	353 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	ATO3	Q12359	275 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	HBN1	Q96VH4	193 aa		6.1	□□□□□ -1.43
RRP43	YCR035C	YEA4	P40004	342 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	PUS4	P48567	403 aa	Known RBP	6.09	□□□□□ -1.43
RRP43	YCR035C	YGR050C	P53231	118 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	YGR151C	P53287	111 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	YNL234W	P53857	426 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	YMR082C	Q04276	118 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	YMR317W	Q04893	1140 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	FCY1	Q12178	158 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	AGC1	Q12482	902 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	YHR213W-A	Q8TGT4	77 aa		6.09	□□□□□ -1.43
RRP43	YCR035C	ADE8	P04161	214 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	RPL11A	P0C0W9	174 aa	Known RBP	6.08	□□□□□ -1.44
RRP43	YCR035C	UBI4	P0CG63	381 aa	Known RBP	6.08	□□□□□ -1.44
RRP43	YCR035C	NOP1	P15646	327 aa	Known RBP	6.08	□□□□□ -1.44
RRP43	YCR035C	BGL2	P15703	313 aa	Known RBP	6.08	□□□□□ -1.44
RRP43	YCR035C	NOP16	P40007	231 aa	Known RBP	6.08	□□□□□ -1.44
RRP43	YCR035C	COX15	P40086	486 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	DFG10	P40526	253 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	YIP1	P53039	248 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	PDR17	P53844	350 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	MED7	Q08278	222 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	YGL258W-A	Q3E740	77 aa		6.08	□□□□□ -1.44
RRP43	YCR035C	RPL11B	Q3E757	174 aa	Predicted RBP	6.08	□□□□□ -1.44
RRP43	YCR035C	CYC7	P00045	113 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	HTB1	P02293	131 aa	Known RBP	6.07	□□□□□ -1.44
RRP43	YCR035C	YCR025C	P25352	136 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	UPS2	P35200	230 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	ATP3	P38077	311 aa	Known RBP	6.07	□□□□□ -1.44
RRP43	YCR035C	YBR184W	P38299	523 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	EMC5	P40540	141 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	PHO23	P50947	330 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	DYN2	Q02647	92 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	STD1	Q02794	444 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	DCS1	Q06151	350 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	JID1	Q12350	301 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	RAX2	Q12465	1220 aa		6.07	□□□□□ -1.44
RRP43	YCR035C	FCY2	P17064	533 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	PHO85	P17157	305 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	BNA1	P47096	177 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	UBC12	P52491	188 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	HCH1	P53834	153 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	USV1	Q12132	391 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	PRR2	Q12310	699 aa		6.06	□□□□□ -1.44
RRP43	YCR035C	RPB9	P27999	122 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	YKR045C	P36138	183 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	RTC3	P38804	111 aa	Predicted RBP	6.05	□□□□□ -1.44
RRP43	YCR035C	ERG25	P53045	309 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	YNR066C	P53752	436 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	MRPS17	Q03246	237 aa	Predicted RBP	6.05	□□□□□ -1.44
RRP43	YCR035C	ORM2	Q06144	216 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	TMA10	Q06177	86 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	MCH1	Q07376	486 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	NDE2	Q07500	545 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	YDL242W	Q07746	117 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	POC4	Q12245	148 aa	Predicted RBP	6.05	□□□□□ -1.44
RRP43	YCR035C	ATP14	Q12349	124 aa		6.05	□□□□□ -1.44
RRP43	YCR035C	RPS25B	P0C0T4	108 aa	Known RBP	6.04	□□□□□ -1.44
RRP43	YCR035C	ZRC1	P20107	442 aa		6.04	□□□□□ -1.44
RRP43	YCR035C	ELO2	P25358	347 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms