RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCS60	YBR222C	YMR166C	Q03829	368 aa		5.11	□□□□□ -1.59
PCS60	YBR222C	YLR126C	Q12288	251 aa		5.11	□□□□□ -1.59
PCS60	YBR222C	URB1	P34241	1764 aa	Known RBP	5.11	□□□□□ -1.59
PCS60	YBR222C	NUP192	P47054	1683 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	COX5A	P00424	153 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	PAI3	P01094	68 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	ERS1	P17261	260 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	COX10	P21592	462 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	YHK8	P38776	514 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	MDM31	P38880	579 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	PFS2	P42841	465 aa	Known RBP	5.1	□□□□□ -1.59
PCS60	YBR222C	ATG27	P46989	271 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	SLG1	P54867	378 aa		5.1	□□□□□ -1.59
PCS60	YBR222C	FCF1	Q05498	189 aa	Predicted RBP	5.1	□□□□□ -1.59
PCS60	YBR222C	YGK3	Q12222	375 aa	Predicted RBP	5.1	□□□□□ -1.59
PCS60	YBR222C	OPI3	P05375	206 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	SEC4	P07560	215 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	RPS2	P25443	254 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	YCR090C	P25654	182 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	ERG24	P32462	438 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	MKK1	P32490	508 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	SOR1	P35497	357 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	YKR070W	P36151	352 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	TEM1	P38987	245 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	YIL024C	P40543	189 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	YIA6	P40556	373 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	TTI2	P47168	421 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	SHH4	Q06236	168 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	SOR2	Q07786	357 aa		5.09	□□□□□ -1.59
PCS60	YBR222C	PRS5	Q12265	496 aa	Known RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	SME1	Q12330	94 aa	Predicted RBP	5.09	□□□□□ -1.59
PCS60	YBR222C	MSW1	P04803	379 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	RPL7A	P05737	244 aa	Known RBP	5.08	□□□□□ -1.6
PCS60	YBR222C	HMRA1	P0CY11	126 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	KAR4	P25583	335 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	ATS1	P31386	333 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	ZRT1	P32804	376 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	YIL029C	P40538	142 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	SCW11	P53189	542 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	ATP23	P53722	227 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	RCE1	Q03530	315 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	YPR098C	Q06089	161 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	BSP1	Q06604	576 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	GAS1	P22146	559 aa	Known RBP	5.08	□□□□□ -1.6
PCS60	YBR222C	YMC1	P32331	307 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	CLB6	P32943	380 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	ARC40	P38328	384 aa	Known RBP	5.08	□□□□□ -1.6
PCS60	YBR222C	ISC1	P40015	477 aa	Known RBP	5.08	□□□□□ -1.6
PCS60	YBR222C	RRT5	P43607	289 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	YFR045W	P43617	309 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	PRY1	P47032	299 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	EAF6	P47128	113 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	LOA1	Q06508	300 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	YPS3	Q12303	508 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	YBL112C	Q3E7Y4	105 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	YIL134C-A	Q45U18	67 aa		5.08	□□□□□ -1.6
PCS60	YBR222C	ADH1	P00330	348 aa	Known RBP	5.07	□□□□□ -1.6
PCS60	YBR222C	SIR2	P06700	562 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	ADH3	P07246	375 aa	Known RBP	5.07	□□□□□ -1.6
PCS60	YBR222C	INO4	P13902	151 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	MRPL20	P22354	195 aa	Predicted RBP	5.07	□□□□□ -1.6
PCS60	YBR222C	COX13	P32799	129 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	SDH4	P37298	181 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	CAT5	P41735	233 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	PAM16	P42949	149 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	YFR054C	P43622	192 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	BXI1	P48558	297 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	GAS3	Q03655	524 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	CSI2	Q08054	341 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	YOL131W	Q08270	108 aa		5.07	□□□□□ -1.6
PCS60	YBR222C	RPL30	P14120	105 aa	Known RBP	5.06	□□□□□ -1.6
PCS60	YBR222C	RPB3	P16370	318 aa	Known RBP	5.06	□□□□□ -1.6
PCS60	YBR222C	RPB11	P38902	120 aa		5.06	□□□□□ -1.6
PCS60	YBR222C	PUS2	P53167	370 aa		5.06	□□□□□ -1.6
PCS60	YBR222C	KEI1	Q06346	221 aa		5.06	□□□□□ -1.6
PCS60	YBR222C	TIR4	Q12218	487 aa	Predicted RBP	5.06	□□□□□ -1.6
PCS60	YBR222C	IZH2	Q12442	317 aa		5.06	□□□□□ -1.6
PCS60	YBR222C	YOS1	Q3E834	85 aa		5.06	□□□□□ -1.6
PCS60	YBR222C	NOP1	P15646	327 aa	Known RBP	5.05	□□□□□ -1.6
PCS60	YBR222C	ARF2	P19146	181 aa	Known RBP	5.05	□□□□□ -1.6
PCS60	YBR222C	ATG15	P25641	520 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	MED6	P38782	295 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	AVT2	P39981	480 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	PRM5	P40476	318 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	ARP3	P47117	449 aa	Known RBP	5.05	□□□□□ -1.6
PCS60	YBR222C	AIM25	P47140	327 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	BAT2	P47176	376 aa	Known RBP	5.05	□□□□□ -1.6
PCS60	YBR222C	GEP7	P53171	287 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	YNL033W	P53964	284 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	YNL019C	P53975	284 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	RPS10A	Q08745	105 aa	Predicted RBP	5.05	□□□□□ -1.6
PCS60	YBR222C	YDL009C	Q12210	107 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	YNR034W-A	Q3E841	98 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	COX1	P00401	534 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	SRP21	P32342	167 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	TMA19	P35691	167 aa	Known RBP	5.05	□□□□□ -1.6
PCS60	YBR222C	POP8	P38208	133 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	MBB1	P39534	108 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	MST28	P39552	234 aa		5.05	□□□□□ -1.6
PCS60	YBR222C	SYS1	P41544	203 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms