RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W YHR122WP38829 231 aa3.99□□□□□ -1.77
PRE7YBL041W POP2P39008 433 aa3.99□□□□□ -1.77
PRE7YBL041W YJL213WP40896 331 aa3.99□□□□□ -1.77
PRE7YBL041W RPA34P47006 233 aaPredicted RBP3.99□□□□□ -1.77
PRE7YBL041W CWC25P53854 179 aaKnown RBP3.99□□□□□ -1.77
PRE7YBL041W TSA2Q04120 196 aa3.99□□□□□ -1.77
PRE7YBL041W VBA1Q04301 562 aa3.99□□□□□ -1.77
PRE7YBL041W HOR7Q05827 59 aa3.99□□□□□ -1.77
PRE7YBL041W MCH1Q07376 486 aa3.99□□□□□ -1.77
PRE7YBL041W DCP1Q12517 231 aaPredicted RBP3.99□□□□□ -1.77
PRE7YBL041W BOL1Q3E793 110 aa3.99□□□□□ -1.77
PRE7YBL041W TRR1P29509 319 aaKnown RBP3.98□□□□□ -1.77
PRE7YBL041W VMA8P32610 256 aaKnown RBP3.98□□□□□ -1.77
PRE7YBL041W GPP2P40106 250 aaKnown RBP3.98□□□□□ -1.77
PRE7YBL041W WWM1P43582 211 aaKnown RBP3.98□□□□□ -1.77
PRE7YBL041W LSM1P47017 172 aaKnown RBP3.98□□□□□ -1.77
PRE7YBL041W IRC18P47056 224 aa3.98□□□□□ -1.77
PRE7YBL041W SYM1Q06563 197 aa3.98□□□□□ -1.77
PRE7YBL041W HRD1Q08109 551 aa3.98□□□□□ -1.77
PRE7YBL041W NGL1Q08213 363 aaKnown RBP3.98□□□□□ -1.77
PRE7YBL041W YOR385WQ08909 290 aa3.98□□□□□ -1.77
PRE7YBL041W HUG1Q6Q5K6 68 aa3.98□□□□□ -1.77
PRE7YBL041W VPS63O13549 108 aa3.97□□□□□ -1.77
PRE7YBL041W CDC23P16522 626 aa3.97□□□□□ -1.77
PRE7YBL041W OLE1P21147 510 aaKnown RBP3.97□□□□□ -1.77
PRE7YBL041W CPR4P25334 318 aa3.97□□□□□ -1.77
PRE7YBL041W YCP4P25349 247 aaKnown RBP3.97□□□□□ -1.77
PRE7YBL041W YHR138CP38841 114 aaPredicted RBP3.97□□□□□ -1.77
PRE7YBL041W HPA3P39979 161 aa3.97□□□□□ -1.77
PRE7YBL041W SER2P42941 309 aa3.97□□□□□ -1.77
PRE7YBL041W MEH1Q02205 184 aa3.97□□□□□ -1.77
PRE7YBL041W YFH1Q07540 174 aa3.97□□□□□ -1.77
PRE7YBL041W SCP1Q08873 200 aa3.97□□□□□ -1.77
PRE7YBL041W AEP3Q12089 606 aa3.97□□□□□ -1.77
PRE7YBL041W YHR212W-AP0CX91 67 aa3.96□□□□□ -1.78
PRE7YBL041W YBR144CP34215 104 aa3.96□□□□□ -1.78
PRE7YBL041W YKR045CP36138 183 aa3.96□□□□□ -1.78
PRE7YBL041W GEP4P38812 185 aa3.96□□□□□ -1.78
PRE7YBL041W RFC2P40348 353 aa3.96□□□□□ -1.78
PRE7YBL041W ERG25P53045 309 aa3.96□□□□□ -1.78
PRE7YBL041W RSM27P53305 110 aa3.96□□□□□ -1.78
PRE7YBL041W CAB5Q03941 241 aa3.96□□□□□ -1.78
PRE7YBL041W NDE2Q07500 545 aa3.96□□□□□ -1.78
PRE7YBL041W YOL029CQ08187 201 aa3.96□□□□□ -1.78
PRE7YBL041W YNG1Q08465 219 aa3.96□□□□□ -1.78
PRE7YBL041W PRM3Q08931 133 aa3.96□□□□□ -1.78
PRE7YBL041W YPL199CQ08954 240 aa3.96□□□□□ -1.78
PRE7YBL041W IES3Q12345 250 aa3.96□□□□□ -1.78
PRE7YBL041W HTB1P02293 131 aaKnown RBP3.95□□□□□ -1.78
PRE7YBL041W RPS8AP0CX39 200 aaKnown RBP3.95□□□□□ -1.78
PRE7YBL041W RPS8BP0CX40 200 aaKnown RBP3.95□□□□□ -1.78
PRE7YBL041W TAL1P15019 335 aaKnown RBP3.95□□□□□ -1.78
PRE7YBL041W STF2P16965 84 aa3.95□□□□□ -1.78
PRE7YBL041W HYM1P32464 399 aa3.95□□□□□ -1.78
PRE7YBL041W UTP11P34247 250 aaPredicted RBP3.95□□□□□ -1.78
PRE7YBL041W POP8P38208 133 aa3.95□□□□□ -1.78
PRE7YBL041W LAG1P38703 411 aa3.95□□□□□ -1.78
PRE7YBL041W IPI1P38803 334 aaPredicted RBP3.95□□□□□ -1.78
PRE7YBL041W AIM20P40451 204 aa3.95□□□□□ -1.78
PRE7YBL041W AIM25P47140 327 aa3.95□□□□□ -1.78
PRE7YBL041W UBP8P50102 471 aa3.95□□□□□ -1.78
PRE7YBL041W CWC23P52868 283 aaPredicted RBP3.95□□□□□ -1.78
PRE7YBL041W THI74Q04083 370 aa3.95□□□□□ -1.78
PRE7YBL041W HTZ1Q12692 134 aaKnown RBP3.95□□□□□ -1.78
PRE7YBL041W SPT14P32363 452 aa3.94□□□□□ -1.78
PRE7YBL041W UTR5P32630 166 aa3.94□□□□□ -1.78
PRE7YBL041W PAN3P36102 679 aaPredicted RBP3.94□□□□□ -1.78
PRE7YBL041W TPN1P53099 579 aa3.94□□□□□ -1.78
PRE7YBL041W TOS8P53147 276 aa3.94□□□□□ -1.78
PRE7YBL041W CAB4P53332 305 aa3.94□□□□□ -1.78
PRE7YBL041W GIS2P53849 153 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PRE7YBL041W YHP1Q04116 353 aa3.94□□□□□ -1.78
PRE7YBL041W RTT103Q05543 409 aa3.94□□□□□ -1.78
PRE7YBL041W ATG31Q12421 196 aa3.94□□□□□ -1.78
PRE7YBL041W TDH1P00360 332 aaKnown RBP3.93□□□□□ -1.78
PRE7YBL041W NOP1P15646 327 aaKnown RBP3.93□□□□□ -1.78
PRE7YBL041W MRPL38P35996 138 aaPredicted RBP3.93□□□□□ -1.78
PRE7YBL041W ATP3P38077 311 aaKnown RBP3.93□□□□□ -1.78
PRE7YBL041W COS8P38723 381 aa3.93□□□□□ -1.78
PRE7YBL041W COX15P40086 486 aa3.93□□□□□ -1.78
PRE7YBL041W YNL194CP40169 301 aa3.93□□□□□ -1.78
PRE7YBL041W YJR012CP47087 207 aa3.93□□□□□ -1.78
PRE7YBL041W LSM7P53905 115 aaKnown RBP3.93□□□□□ -1.78
PRE7YBL041W PBP4Q07362 185 aaKnown RBP3.93□□□□□ -1.78
PRE7YBL041W MDN1Q12019 4910 aaKnown RBP3.93□□□□□ -1.78
PRE7YBL041W IMD2P38697 523 aaKnown RBP3.92□□□□□ -1.78
PRE7YBL041W LSM12P38828 187 aaKnown RBP3.92□□□□□ -1.78
PRE7YBL041W FLO5P38894 1075 aa3.92□□□□□ -1.78
PRE7YBL041W LST8P41318 303 aa3.92□□□□□ -1.78
PRE7YBL041W ARP3P47117 449 aaKnown RBP3.92□□□□□ -1.78
PRE7YBL041W IMD3P50095 523 aaKnown RBP3.92□□□□□ -1.78
PRE7YBL041W NIF3P53081 288 aa3.92□□□□□ -1.78
PRE7YBL041W GPG1P53130 126 aa3.92□□□□□ -1.78
PRE7YBL041W CRH1P53301 507 aa3.92□□□□□ -1.78
PRE7YBL041W YGR219WP53307 113 aa3.92□□□□□ -1.78
PRE7YBL041W SSU72P53538 206 aaPredicted RBP3.92□□□□□ -1.78
PRE7YBL041W FSH2Q05015 223 aa3.92□□□□□ -1.78
PRE7YBL041W PHO92Q06390 306 aa3.92□□□□□ -1.78
PRE7YBL041W RAD28Q12021 506 aa3.92□□□□□ -1.78
PRE7YBL041W YJR112W-AQ3E743 109 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms