RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TRPV5Q9NQA5 729 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 FANCMQ8IYD8 2048 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 DCHS1Q96JQ0 3298 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 SLC38A8A6NNN8 435 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 PPEF2O14830 753 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 LILRB5O75023 590 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 TBCAO75347 108 aaKnown RBP14.09□□□□□ -0.15
SF3B3-202ENST00000562722 SOAT2O75908 522 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 VNN2O95498 520 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 TYMPP19971 482 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 SDHBP21912 280 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 GJB2P29033 226 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 AARSP49588 968 aaKnown RBP eCLIP14.09□□□□□ -0.15
SF3B3-202ENST00000562722 GPR17Q13304 367 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 LPAL2Q16609 132 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 ARHGAP15Q53QZ3 475 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 STXBP5Q5T5C0 1151 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 JADE1Q6IE81 842 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 PRR23BQ6ZRT6 265 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 TTC8Q8TAM2 541 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 NELL1Q92832 810 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 AK8Q96MA6 479 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 SEPT5Q99719 369 aaPredicted RBP14.09□□□□□ -0.15
SF3B3-202ENST00000562722 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 ATXN3LQ9H3M9 355 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 PARVGQ9HBI0 331 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 DLL3Q9NYJ7 618 aa14.09□□□□□ -0.15
SF3B3-202ENST00000562722 CDV3Q9UKY7 258 aaKnown RBP14.09□□□□□ -0.15
SF3B3-202ENST00000562722 ZNF292O60281 2723 aa14.08□□□□□ -0.15
SF3B3-202ENST00000562722 OTOGLQ3ZCN5 2332 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 MTMR11A4FU01 709 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 TRAK2O60296 914 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 FGF19O95750 216 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 SCP2P22307 547 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 CXCL12P48061 93 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 SOX9P48436 509 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 CDR1P51861 262 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 LILRA4P59901 499 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 LMNB2Q03252 620 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 MYBPC2Q14324 1141 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 LRRC32Q14392 662 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 TMEM132DQ14C87 1099 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 ZBTB6Q15916 424 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 TAF12Q16514 161 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 SPATA1Q5VX52 437 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 TMC8Q8IU68 726 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 CD302Q8IX05 232 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 RSPRY1Q96DX4 576 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 SENP8Q96LD8 212 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 GCNAQ96QF7 691 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 TSPAN18Q96SJ8 248 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 TMEM209Q96SK2 561 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 DNAJC25Q9H1X3 360 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 ASB3Q9Y575 518 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 NCANO14594 1321 aa14.08□□□□□ -0.16
SF3B3-202ENST00000562722 DNAH14Q0VDD8 3507 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 PRR5-ARHGAP8B1AHC4 643 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 CHADO15335 359 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 SLC26A4O43511 780 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 NFICP08651 508 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 GABRR2P28476 465 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 ARHGAP8P85298 464 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 SATB1Q01826 763 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 MCM6Q14566 821 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 VEPH1Q14D04 833 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 MGAT5BQ3V5L5 792 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 GPR158Q5T848 1215 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 C9orf57Q5W0N0 161 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 C1orf228Q6PIY5 440 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 DNAJB7Q7Z6W7 309 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-202ENST00000562722 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 ARID3BQ8IVW6 561 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-202ENST00000562722 TTC9BQ8N6N2 239 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 MSANTD3Q96H12 275 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 TMX3Q96JJ7 454 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 LRRC3Q9BY71 257 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 C8orf33Q9H7E9 229 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-202ENST00000562722 RBM12Q9NTZ6 932 aaKnown RBP14.07□□□□□ -0.16
SF3B3-202ENST00000562722 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
SF3B3-202ENST00000562722 PDCD11Q14690 1871 aaKnown RBP14.07□□□□□ -0.16
SF3B3-202ENST00000562722 TICRRQ7Z2Z1 1910 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 MYH11P35749 1972 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 A0A0B4J269 797 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 ARNTLO00327 626 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 FAM189A1O60320 539 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 PIGRP01833 764 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 CHRNB1P11230 501 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 PLCG1P19174 1290 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 PAX3P23760 479 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 ABCD1P33897 745 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 TUFMP49411 452 aaKnown RBP14.06□□□□□ -0.16
SF3B3-202ENST00000562722 ACOT2P49753 483 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 FCHO2Q0JRZ9 810 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
SF3B3-202ENST00000562722 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms