RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MYBP10242 640 aa6□□□□□ -1.45
USP8-218ENST00000561330 KCNA2P16389 499 aa6□□□□□ -1.45
USP8-218ENST00000561330 ZEB1P37275 1124 aaPredicted RBP6□□□□□ -1.45
USP8-218ENST00000561330 POU6F2P78424 691 aaPredicted RBP6□□□□□ -1.45
USP8-218ENST00000561330 FGL2Q14314 439 aa6□□□□□ -1.45
USP8-218ENST00000561330 GEN1Q17RS7 908 aa6□□□□□ -1.45
USP8-218ENST00000561330 ARHGAP29Q52LW3 1261 aa6□□□□□ -1.45
USP8-218ENST00000561330 KHDC1LQ5JSQ8 128 aa6□□□□□ -1.45
USP8-218ENST00000561330 ABHD17BQ5VST6 288 aa6□□□□□ -1.45
USP8-218ENST00000561330 TAPT1Q6NXT6 567 aa6□□□□□ -1.45
USP8-218ENST00000561330 VRK3Q8IV63 474 aa6□□□□□ -1.45
USP8-218ENST00000561330 Q8NA96 180 aa6□□□□□ -1.45
USP8-218ENST00000561330 NSUN7Q8NE18 718 aaKnown RBP6□□□□□ -1.45
USP8-218ENST00000561330 PLBD2Q8NHP8 589 aa6□□□□□ -1.45
USP8-218ENST00000561330 DDX17Q92841 729 aaKnown RBP6□□□□□ -1.45
USP8-218ENST00000561330 SMOQ99835 787 aa6□□□□□ -1.45
USP8-218ENST00000561330 LRFN3Q9BTN0 628 aa6□□□□□ -1.45
USP8-218ENST00000561330 PCED1AQ9H1Q7 454 aa6□□□□□ -1.45
USP8-218ENST00000561330 CNNM1Q9NRU3 951 aa6□□□□□ -1.45
USP8-218ENST00000561330 C1orf112Q9NSG2 853 aa6□□□□□ -1.45
USP8-218ENST00000561330 GOLGA6AQ9NYA3 693 aa6□□□□□ -1.45
USP8-218ENST00000561330 GABBR1Q9UBS5 961 aa6□□□□□ -1.45
USP8-218ENST00000561330 TESQ9UGI8 421 aaKnown RBP6□□□□□ -1.45
USP8-218ENST00000561330 CPA4Q9UI42 421 aa6□□□□□ -1.45
USP8-218ENST00000561330 PCDHA6Q9UN73 950 aa6□□□□□ -1.45
USP8-218ENST00000561330 A0A1W2PS29 197 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 PIPSLA2A3N6 862 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 E9PLN8 166 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 POLRMTO00411 1230 aaKnown RBP5.99□□□□□ -1.45
USP8-218ENST00000561330 TUSC2O75896 110 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 SLPIP03973 132 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 ITGAMP11215 1152 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 VAV2P52735 878 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 USP14P54578 494 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 RAB1AP62820 205 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 BLOC1S1P78537 153 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 TAP1Q03518 808 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 EXOSC9Q06265 439 aaKnown RBP5.99□□□□□ -1.45
USP8-218ENST00000561330 HABP2Q14520 560 aaPredicted RBP5.99□□□□□ -1.45
USP8-218ENST00000561330 EMC10Q5UCC4 262 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 LAIR1Q6GTX8 287 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 FMNL3Q8IVF7 1028 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 WDR75Q8IWA0 830 aaKnown RBP5.99□□□□□ -1.45
USP8-218ENST00000561330 ASB10Q8WXI3 467 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 FUBP1Q96AE4 644 aaKnown RBP5.99□□□□□ -1.45
USP8-218ENST00000561330 TRIB1Q96RU8 372 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 VKORC1Q9BQB6 163 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 CNPPD1Q9BV87 410 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 RSAD1Q9HA92 442 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 TBCCD1Q9NVR7 557 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 VSX1Q9NZR4 365 aaPredicted RBP5.99□□□□□ -1.45
USP8-218ENST00000561330 CTTNBP2NLQ9P2B4 639 aa5.99□□□□□ -1.45
USP8-218ENST00000561330 PRAMEF33A0A0G2JMD5 474 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 TOR1BO14657 336 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 PRAMEF10O60809 474 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 ZFPL1O95159 310 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 EGR2P11161 476 aaPredicted RBP5.98□□□□□ -1.45
USP8-218ENST00000561330 HDCP19113 662 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 AVPR1BP47901 424 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 ANXA11P50995 505 aaKnown RBP5.98□□□□□ -1.45
USP8-218ENST00000561330 RPS7P62081 194 aaKnown RBP5.98□□□□□ -1.45
USP8-218ENST00000561330 FPGSQ05932 587 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 DPTQ07507 201 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 GFOD2Q3B7J2 385 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 ANO6Q4KMQ2 910 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 CRB2Q5IJ48 1285 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 SP5Q6BEB4 398 aaPredicted RBP5.98□□□□□ -1.45
USP8-218ENST00000561330 Q6ZPA2 131 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 OVCH2Q7RTZ1 564 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 GPR149Q86SP6 731 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 USP37Q86T82 979 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 TMEM125Q96AQ2 219 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 SORCS2Q96PQ0 1159 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 TINAGL1Q9GZM7 467 aaPredicted RBP5.98□□□□□ -1.45
USP8-218ENST00000561330 UNKLQ9H9P5 680 aaKnown RBP5.98□□□□□ -1.45
USP8-218ENST00000561330 STAP2Q9UGK3 403 aa5.98□□□□□ -1.45
USP8-218ENST00000561330 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 VSTM5A8MXK1 200 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 E7ENX8 843 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 SUN1O94901 812 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 HKR1P10072 659 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 KRT4P19013 534 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 KCNJ5P48544 419 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 AGFG1P52594 562 aaKnown RBP5.97□□□□□ -1.45
USP8-218ENST00000561330 INHBCP55103 352 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 SOX8P57073 446 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 GPSM2P81274 684 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 TAP2Q03519 686 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 SCAPQ12770 1279 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 DYRK1AQ13627 763 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 PREPLQ4J6C6 727 aaPredicted RBP5.97□□□□□ -1.45
USP8-218ENST00000561330 NPNTQ6UXI9 565 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 MRGPRGQ86SM5 289 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 SUPT20HQ8NEM7 779 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 TTC8Q8TAM2 541 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 PTCD3Q96EY7 689 aaKnown RBP5.97□□□□□ -1.45
USP8-218ENST00000561330 LRIG1Q96JA1 1093 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 TTPALQ9BTX7 342 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 FAM204AQ9H8W3 233 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms