RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 BRSK2Q8IWQ3 736 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 CCDC65Q8IXS2 484 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 SYCP3Q8IZU3 236 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 ELMOD1Q8N336 334 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 GLIS3Q8NEA6 775 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 OR10T2Q8NGX3 314 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 ATOH1Q92858 354 aaPredicted RBP9.76□□□□□ -0.85
USF1-204ENST00000472217 HPS3Q969F9 1004 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 DHX58Q96C10 678 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 RTP3Q9BQQ7 232 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 PYM1Q9BRP8 204 aaKnown RBP9.76□□□□□ -0.85
USF1-204ENST00000472217 CBWD1Q9BRT8 395 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 TRIM9Q9C026 710 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 IRF2BPLQ9H1B7 796 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 DPP3Q9NY33 737 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 GDE1Q9NZC3 331 aa9.76□□□□□ -0.85
USF1-204ENST00000472217 MTMR11A4FU01 709 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 GOLGA8IPA6NC78 632 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 GOLGA8JA6NMD2 632 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 STK25O00506 426 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 CYB561D2O14569 222 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ZNF197O14709 1029 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 MOSPD3O75425 235 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ECI2O75521 394 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 LDHAP00338 332 aaKnown RBP9.75□□□□□ -0.85
USF1-204ENST00000472217 CYP11A1P05108 521 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 MYL4P12829 197 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 RFX1P22670 979 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 FCARP24071 287 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 EPHA5P54756 1037 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ASIC1P78348 528 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 TFAMQ00059 246 aaKnown RBP9.75□□□□□ -0.85
USF1-204ENST00000472217 DUSP4Q13115 394 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 MYBPC2Q14324 1141 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 SV2CQ496J9 727 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 CYP4A22Q5TCH4 519 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 IQCEQ6IPM2 695 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 PHLDB3Q6NSJ2 640 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ARMCX5Q6P1M9 558 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 CCDC105Q8IYK2 499 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 TTC9BQ8N6N2 239 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 IQUBQ8NA54 791 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ATAD1Q8NBU5 361 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 KCNG4Q8TDN1 519 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 BORCS6Q96GS4 357 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 FAM84AQ96KN4 292 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ZNF512Q96ME7 567 aaPredicted RBP9.75□□□□□ -0.85
USF1-204ENST00000472217 PLA2G2FQ9BZM2 168 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 DNAJC25Q9H1X3 360 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 PCIF1Q9H4Z3 704 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 TMEM206Q9H813 350 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 ASAH2Q9NR71 780 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 RBAKQ9NYW8 714 aaPredicted RBP9.75□□□□□ -0.85
USF1-204ENST00000472217 PCDHA7Q9UN72 937 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 SLC27A5Q9Y2P5 690 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 TCHHQ07283 1943 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 SCN1AP35498 2009 aa9.75□□□□□ -0.85
USF1-204ENST00000472217 KPNA7A9QM74 516 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 TULP1O00294 542 aaPredicted RBP9.74□□□□□ -0.85
USF1-204ENST00000472217 POLR2DO15514 142 aaKnown RBP9.74□□□□□ -0.85
USF1-204ENST00000472217 EXTL3O43909 919 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 SOAT2O75908 522 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 MICAL2O94851 1124 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 ITGB3P05106 788 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 GJA1P17302 382 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 CASP1P29466 404 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 HOXD13P35453 343 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 ME1P48163 572 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 CDR1P51861 262 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 STARD6P59095 220 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 AMPD3Q01432 767 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 DNM1Q05193 864 aaKnown RBP9.74□□□□□ -0.85
USF1-204ENST00000472217 PLD1Q13393 1074 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 SNW1Q13573 536 aaKnown RBP9.74□□□□□ -0.85
USF1-204ENST00000472217 SLC39A12Q504Y0 691 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 FAM78AQ5JUQ0 283 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 WSCD1Q658N2 575 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 ATL3Q6DD88 541 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 TANGO2Q6ICL3 276 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 CENPPQ6IPU0 288 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 CNNM4Q6P4Q7 775 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 STXBP4Q6ZWJ1 553 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 METTL23Q86XA0 190 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 TMC8Q8IU68 726 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 GPD1LQ8N335 351 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 C1orf127Q8N9H9 656 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 DTWD2Q8NBA8 298 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 LEMD2Q8NC56 503 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
USF1-204ENST00000472217 ELSPBP1Q96BH3 223 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 ZSWIM3Q96MP5 696 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 ZNF560Q96MR9 790 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 FOXQ1Q9C009 403 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 ZCWPW1Q9H0M4 648 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms