RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CTC1Q2NKJ3 1217 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 NLRP9Q7RTR0 991 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 PASD1Q8IV76 773 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 BSNDQ8WZ55 320 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 TTC25Q96NG3 672 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 MIPEPQ99797 713 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 KANSL3Q9P2N6 904 aa13.74□□□□□ -0.21
PDZRN3-205ENST00000466780 DENND3A2RUS2 1198 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ENTPD3O75355 529 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 TUBP50607 506 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 HSD17B4P51659 736 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 MAPK6Q16659 721 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 TKFCQ3LXA3 575 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 CMPK2Q5EBM0 449 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 CEP128Q6ZU80 1094 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ENOSF1Q7L5Y1 443 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 CHURC1Q8WUH1 139 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 VPS37BQ9H9H4 285 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ENO4A6NNW6 628 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ATP4AP20648 1035 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 SSR1P43307 286 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ARSEP51690 589 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 NFX1Q12986 1120 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 SPDYAQ5MJ70 313 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 HHATQ5VTY9 493 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 KAZNQ674X7 775 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 C15orf39Q6ZRI6 1047 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF677Q86XU0 584 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 AGBL1Q96MI9 1066 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 NPHS2Q9NP85 383 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 C1orf112Q9NSG2 853 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 SENP1Q9P0U3 644 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 ZFP69BQ9UJL9 534 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
PDZRN3-205ENST00000466780 C2CD2LO14523 706 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 ALOX15BO15296 676 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 BANF1O75531 89 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 PTPN4P29074 926 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 PCK1P35558 622 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 SOX10P56693 466 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 MRPS9P82933 396 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 GPS1Q13098 491 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 XKR9Q5GH70 373 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 LMBRD2Q68DH5 695 aaPredicted RBP13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 MTDHQ86UE4 582 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 ALLCQ8N6M5 410 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 TIPINQ9BVW5 301 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF148Q9UQR1 794 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 UBIAD1Q9Y5Z9 338 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 NFASCO94856 1347 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 KIF3CO14782 793 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 PDHA1P08559 390 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 RASSF2P50749 326 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 NOMO3P69849 1222 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 AOC3Q16853 763 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 PLEKHA7Q6IQ23 1121 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 CLNKQ7Z7G1 428 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 C4orf19Q8IY42 314 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 SH3TC2Q8TF17 1288 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 PRMT6Q96LA8 375 aaPredicted RBP13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 DEFB129Q9H1M3 183 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 LNPEPQ9UIQ6 1025 aa13.72□□□□□ -0.21
PDZRN3-205ENST00000466780 NFIBO00712 420 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 ZC3H11AO75152 810 aaKnown RBP eCLIP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 KRT4P19013 534 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 ADRA1DP25100 572 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 GPX6P59796 221 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 NOP14P78316 857 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 LMNB2Q03252 620 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 KHDC1Q4VXA5 237 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 RNASEH2BQ5TBB1 312 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 LIN9Q5TKA1 542 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 RFWD2Q8NHY2 731 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 FAM213AQ9BRX8 229 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 MAP3K13O43283 966 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 MARK3P27448 753 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 WNT7BP56706 349 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 MORF4L2Q15014 288 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms