RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CEP120Q8N960 986 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 FEZF2Q8TBJ5 459 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 PDZD7Q9H5P4 517 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 CEP83Q9Y592 693 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 RRN3P2A6NIE6 340 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 LACTBL1A8MY62 500 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 MED7O43513 233 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 SMPD1P17405 629 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 EIF4BP23588 611 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 COILP38432 576 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 GRIK4Q16099 956 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 CDR2LQ86X02 465 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 RHOT1Q8IXI2 618 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 PIK3R5Q8WYR1 880 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 C18orf8Q96DM3 657 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 BCO2Q9BYV7 579 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 FAM129AQ9BZQ8 928 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 NEUROG2Q9H2A3 272 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 LRRC19Q9H756 370 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 IP6K2Q9UHH9 426 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 TLR3O15455 904 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 CELF2O95319 508 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 VTNP04004 478 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 RARAP10276 462 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 CDC42EP1Q00587 391 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 SIX1Q15475 284 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 SCARA3Q6AZY7 606 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 APBB1IPQ7Z5R6 666 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 NT5DC4Q86YG4 428 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 NLRP7Q8WX94 980 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 SLCO2A1Q92959 643 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 FMO2Q99518 471 aa19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 ZHX1Q9UKY1 873 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-203ENST00000359895 KRT19P08727 400 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 PAEPP09466 180 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 WEE2P0C1S8 567 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 P4HA1P13674 534 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 ARF4P18085 180 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 BRD2P25440 801 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 HSD17B3P37058 310 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 ZDHHC14Q8IZN3 488 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 SMC1BQ8NDV3 1235 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 DDX27Q96GQ7 796 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 SCLT1Q96NL6 688 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 ADPGKQ9BRR6 497 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 TRIM7Q9C029 511 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 FAM124BQ9H5Z6 455 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 VRTNQ9H8Y1 702 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 HOMER3Q9NSC5 361 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 PLAAQ9Y263 795 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 PASKQ96RG2 1323 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 TRPM7Q96QT4 1865 aa19.43■□□□□ 0.7
PDLIM7-203ENST00000359895 NFICP08651 508 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 CETN2P41208 172 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 LACTBP83111 547 aaPredicted RBP19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 C2CD6Q53TS8 623 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 JADE1Q6IE81 842 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 SCARA5Q6ZMJ2 495 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 TMC3Q7Z5M5 1100 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 PHLDB2Q86SQ0 1253 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 TMEM192Q8IY95 271 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 CCDC105Q8IYK2 499 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 KATNAL2Q8IYT4 538 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 C1orf127Q8N9H9 656 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 PTPN18Q99952 460 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 TRIM31Q9BZY9 425 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 LHX5Q9H2C1 402 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 CYP3A43Q9HB55 503 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 NXF1Q9UBU9 619 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 SIX4Q9UIU6 781 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 STRIP2Q9ULQ0 834 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
PDLIM7-203ENST00000359895 GOLGA6L10A6NI86 522 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 A6NNZ2 444 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 TSPAN1O60635 241 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 CAPN2P17655 700 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 POLR2BP30876 1174 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 SSTR3P32745 418 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 TUBB8Q3ZCM7 444 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 SGO2Q562F6 1265 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 MARCH8Q5T0T0 291 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 LLGL2Q6P1M3 1020 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 DNAJC24Q6P3W2 148 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 TTC27Q6P3X3 843 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 SYDE1Q6ZW31 735 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 ERICH1Q86X53 443 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 NPLOC4Q8TAT6 608 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 CPB2Q96IY4 423 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 ZDHHC18Q9NUE0 388 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 FEZ2Q9UHY8 353 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 POLIQ9UNA4 740 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 C2CD2Q9Y426 696 aa19.41■□□□□ 0.7
PDLIM7-203ENST00000359895 A0A1B0GUA9 196 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TCRBV7S2A1N4TA0A589 114 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TMEM191CA6NGB0 347 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 PPFIA2O75334 1257 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 ECEL1O95672 775 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TMEM132DQ14C87 1099 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms