RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SMYD3Q9H7B4 428 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 CFAP99D6REC4 459 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 TLR2O60603 784 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 ITGB3P05106 788 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 SLC2A3P11169 496 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 HARS2P49590 506 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 KDELC2Q7Z4H8 507 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 TRIML2Q8N7C3 387 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 PTPRN2Q92932 1015 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 TRIM4Q9C037 500 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 MUC3BQ9H195 1237 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 IL25Q9H293 177 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 NSMCE4AQ9NXX6 385 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 ADA2Q9NZK5 511 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 NEU2Q9Y3R4 380 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 RIMBP3CA6NJZ7 1639 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 RIMBP3BA6NNM3 1639 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 RIMBP3Q9UFD9 1639 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 CST8O60676 142 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 ODC1P11926 461 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 MAP4P27816 1152 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 GYS2P54840 703 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 VSNL1P62760 191 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 DMTNQ08495 405 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 LRRC14Q15048 493 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 CXorf38Q8TB03 319 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
AMBRA1-201ENST00000314845 GYPCP04921 128 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 GARTP22102 1010 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 GRB10Q13322 594 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ARHGEF7Q14155 803 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 TERF2Q15554 542 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 RNF103-CHMP3A0A140T963 221 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 AKT1P31749 480 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 EPHX2P34913 555 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 CUL2Q13617 745 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 NLRP14Q86W24 1093 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 KCNB2Q92953 911 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 IL1R1P14778 569 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 HMOX2P30519 316 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 SPRP35270 261 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 THPOP40225 353 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 SERPINB4P48594 390 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 PIK3C2BO00750 1634 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 INO80Q9ULG1 1556 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 HOXA2O43364 376 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 PYGLP06737 847 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 RALBP11234 206 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 NCAM1P13591 858 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ABCE1P61221 599 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 CENPCQ03188 943 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 MTFR1Q15390 333 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ST13P4Q8IZP2 240 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 C9orf72Q96LT7 481 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 ING2Q9H160 280 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 LATS2Q9NRM7 1088 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 DPP3Q9NY33 737 aa12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-201ENST00000314845 B3GAT3O94766 335 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 GRIN1Q05586 938 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 USP10Q14694 798 aaKnown RBP12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 RBBP7Q16576 425 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 PCSK9Q8NBP7 692 aaKnown RBP12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 MS4A14Q96JA4 679 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 PSMC3IPQ9P2W1 217 aaPredicted RBP12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 VCAM1P19320 739 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 ZNF200P98182 395 aaPredicted RBP12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 PTPAQ15257 358 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 SYTL3Q4VX76 610 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 AP1ARQ63HQ0 302 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 ARRDC4Q8NCT1 418 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 TRIM51Q9BSJ1 452 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 ETNK1Q9HBU6 452 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.4
AMBRA1-201ENST00000314845 ZNF185O15231 689 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 MED24O75448 989 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms