RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 MMP13P45452 471 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 OSTNP61366 133 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 IFI35P80217 286 aaPredicted RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 BASP1P80723 227 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 ZACNQ401N2 412 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 SULF1Q8IWU6 871 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 ZBED8Q8IZ13 594 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 RNF149Q8NC42 400 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 LMO3Q8TAP4 145 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 NCAPGQ9BPX3 1015 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 CALN1Q9BXU9 219 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 PHKA2P46019 1235 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 NLRP11P59045 1033 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 YWHAGP61981 247 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 BBS9Q3SYG4 887 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 DARS2Q6PI48 645 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 ATXN2LQ8WWM7 1075 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 DCPSQ96C86 337 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 STRA6Q9BX79 667 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 GPR88Q9GZN0 384 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 TRABDQ9H4I3 376 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 UBN1Q9NPG3 1134 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 KLHL11Q9NVR0 708 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.62□□□□□ -0.714e-6■■□□□ 14.3
HMGCR-201ENST00000287936 IQANK1A0A1B0GTG1 560 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 OGTO15294 1046 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 STK10O94804 968 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 MT-ND3P03897 115 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 KRT3P12035 628 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 AUHQ13825 339 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 NBPF12Q5TAG4 269 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 SPOPLQ6IQ16 392 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 CCDC62Q6P9F0 684 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 CCDC60Q8IWA6 550 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 CTAGE3PQ8IX95 158 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 NTPCRQ9BSD7 190 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 TACO1Q9BSH4 297 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 CHST7Q9NS84 486 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 CNTNAP1P78357 1384 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 H0YGN5 161 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 PRPSAP2O60256 369 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 DRD4P21917 467 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 PEX5P50542 639 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 TGFB2P61812 414 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 HIF1AQ16665 826 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ANKRD20A3Q5VUR7 823 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 GPAT2Q6NUI2 795 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ZPBP2Q6X784 338 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 MYCBPQ99417 103 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 PORCNQ9H237 461 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 TMEM134Q9H6X4 195 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ECT2Q9H8V3 914 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 FGFR1OP2Q9NVK5 253 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 NFS1Q9Y697 457 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ZNF536O15090 1300 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 TOM1L1O75674 476 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 IL18RAPO95256 599 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 OSBPP22059 807 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 IREB2P48200 963 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 SARNPP82979 210 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ANGEL2Q5VTE6 544 aaKnown RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 B3GNT9Q6UX72 402 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 RHPN2Q8IUC4 686 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 TRIM42Q8IWZ5 723 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ARHGAP24Q8N264 748 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 ZKSCAN4Q969J2 545 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-201ENST00000287936 LY75O60449 1722 aa10.61□□□□□ -0.71
HMGCR-201ENST00000287936 O00370 1275 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 CLNS1AP54105 237 aaKnown RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 SLC8A3P57103 927 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 KYAT1Q16773 422 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 OR6B2Q6IFH4 312 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 PHF13Q86YI8 300 aaPredicted RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 SREK1Q8WXA9 508 aaKnown RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 HEXIM2Q96MH2 286 aaKnown RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 GMLQ99445 158 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 TUBB6Q9BUF5 446 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 GRHL1Q9NZI5 618 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 IGBP1P78318 339 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 PTP4A2Q12974 167 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 C2CD6Q53TS8 623 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 MFSD5Q6N075 450 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 TTC27Q6P3X3 843 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 CYB5D1Q6P9G0 228 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 FAM47EQ6ZV65 393 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 BRSK2Q8IWQ3 736 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 C7orf43Q8WVR3 580 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 MAGEB18Q96M61 343 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 DDX23Q9BUQ8 820 aaKnown RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 A1CFQ9NQ94 594 aaKnown RBP10.6□□□□□ -0.71
HMGCR-201ENST00000287936 NINJ2Q9NZG7 142 aa10.6□□□□□ -0.71
HMGCR-201ENST00000287936 PSMC3IPQ9P2W1 217 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 512.3 ms