RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W RRP42Q12277 265 aaPredicted RBP1.31□□□□□ -2.2
CTF4YPR135W MRX4Q12467 430 aa1.31□□□□□ -2.2
CTF4YPR135W QCR2P07257 368 aa1.3□□□□□ -2.2
CTF4YPR135W COS2P0CX12 379 aa1.3□□□□□ -2.2
CTF4YPR135W COS3P0CX13 379 aa1.3□□□□□ -2.2
CTF4YPR135W TRR1P29509 319 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W OAC1P32332 324 aa1.3□□□□□ -2.2
CTF4YPR135W HSP150P32478 413 aa1.3□□□□□ -2.2
CTF4YPR135W MRPL3P36516 390 aa1.3□□□□□ -2.2
CTF4YPR135W MRPL39P36533 70 aa1.3□□□□□ -2.2
CTF4YPR135W FRM2P37261 193 aa1.3□□□□□ -2.2
CTF4YPR135W FZO1P38297 855 aa1.3□□□□□ -2.2
CTF4YPR135W COS4P43542 379 aa1.3□□□□□ -2.2
CTF4YPR135W COS10P52924 374 aa1.3□□□□□ -2.2
CTF4YPR135W BRR6P53062 197 aa1.3□□□□□ -2.2
CTF4YPR135W MDM34P53083 459 aa1.3□□□□□ -2.2
CTF4YPR135W SED1Q01589 338 aa1.3□□□□□ -2.2
CTF4YPR135W YML018CQ03730 393 aa1.3□□□□□ -2.2
CTF4YPR135W SPG4Q04438 115 aa1.3□□□□□ -2.2
CTF4YPR135W HEM25Q07534 307 aa1.3□□□□□ -2.2
CTF4YPR135W CSI2Q08054 341 aa1.3□□□□□ -2.2
CTF4YPR135W RRS1Q08746 203 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W UIP4Q08926 304 aa1.3□□□□□ -2.2
CTF4YPR135W HMS1Q12398 434 aa1.3□□□□□ -2.2
CTF4YPR135W EAF3Q12432 401 aa1.3□□□□□ -2.2
CTF4YPR135W AGC1Q12482 902 aa1.3□□□□□ -2.2
CTF4YPR135W LSO2Q3E772 92 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W PET20Q99373 253 aa1.3□□□□□ -2.2
CTF4YPR135W ERD2P18414 219 aa1.3□□□□□ -2.2
CTF4YPR135W YCR099CP25657 155 aa1.3□□□□□ -2.2
CTF4YPR135W CLG1P35190 452 aa1.3□□□□□ -2.2
CTF4YPR135W MRPL28P36527 147 aa1.3□□□□□ -2.2
CTF4YPR135W MRP21P38175 177 aa1.3□□□□□ -2.2
CTF4YPR135W YER076CP40049 302 aa1.3□□□□□ -2.2
CTF4YPR135W APQ12P40532 138 aa1.3□□□□□ -2.2
CTF4YPR135W REE1P40893 198 aa1.3□□□□□ -2.2
CTF4YPR135W LSM1P47017 172 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W YGL235WP53071 178 aa1.3□□□□□ -2.2
CTF4YPR135W NQM1P53228 333 aaPredicted RBP1.3□□□□□ -2.2
CTF4YPR135W YNL046WP53956 172 aa1.3□□□□□ -2.2
CTF4YPR135W YMR279CQ03263 540 aa1.3□□□□□ -2.2
CTF4YPR135W RIF2Q06208 395 aa1.3□□□□□ -2.2
CTF4YPR135W SLD7Q08457 257 aa1.3□□□□□ -2.2
CTF4YPR135W TIR4Q12218 487 aaPredicted RBP1.3□□□□□ -2.2
CTF4YPR135W SNU23Q12368 194 aaPredicted RBP1.3□□□□□ -2.2
CTF4YPR135W YAL063C-AQ3E791 96 aa1.3□□□□□ -2.2
CTF4YPR135W CDC28P00546 298 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W MCK1P21965 375 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W AUA1P32450 94 aa1.3□□□□□ -2.2
CTF4YPR135W ALK2P32789 676 aaPredicted RBP1.3□□□□□ -2.2
CTF4YPR135W CAT2P32796 670 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W PRM5P40476 318 aa1.3□□□□□ -2.2
CTF4YPR135W APS3P47064 194 aa1.3□□□□□ -2.2
CTF4YPR135W YJL016WP47072 561 aa1.3□□□□□ -2.2
CTF4YPR135W SDS23P53172 527 aa1.3□□□□□ -2.2
CTF4YPR135W PEX12Q04370 399 aa1.3□□□□□ -2.2
CTF4YPR135W YPR147CQ06522 304 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W YOR283WQ12040 230 aaKnown RBP1.3□□□□□ -2.2
CTF4YPR135W MRS1P07266 363 aa1.29□□□□□ -2.2
CTF4YPR135W SEC4P07560 215 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W MSI1P13712 422 aa1.29□□□□□ -2.2
CTF4YPR135W ARO2P28777 376 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W ARO7P32178 256 aa1.29□□□□□ -2.2
CTF4YPR135W YBL059WP34224 193 aa1.29□□□□□ -2.2
CTF4YPR135W ECM33P38248 429 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W PEX17P40155 199 aa1.29□□□□□ -2.2
CTF4YPR135W ATG18P43601 500 aa1.29□□□□□ -2.2
CTF4YPR135W UBC12P52491 188 aa1.29□□□□□ -2.2
CTF4YPR135W ADD37Q03233 198 aa1.29□□□□□ -2.2
CTF4YPR135W SPC2Q04969 178 aa1.29□□□□□ -2.2
CTF4YPR135W SFM1Q12314 213 aa1.29□□□□□ -2.2
CTF4YPR135W YER078W-AQ3E7A2 54 aa1.29□□□□□ -2.2
CTF4YPR135W ZWF1P11412 505 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W DPM1P14020 267 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W SEC14P24280 304 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W YCR090CP25654 182 aaKnown RBP1.29□□□□□ -2.2
CTF4YPR135W MDH3P32419 343 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CTF4YPR135W DER1P38307 211 aa1.29□□□□□ -2.2
CTF4YPR135W SHG1P38337 142 aa1.29□□□□□ -2.2
CTF4YPR135W PRM10P42946 383 aa1.29□□□□□ -2.2
CTF4YPR135W YJR056CP47115 236 aa1.29□□□□□ -2.2
CTF4YPR135W FYV6P53913 173 aa1.29□□□□□ -2.2
CTF4YPR135W NUP49Q02199 472 aa1.29□□□□□ -2.2
CTF4YPR135W YOR186WQ08560 144 aa1.29□□□□□ -2.2
CTF4YPR135W CPR4P25334 318 aa1.28□□□□□ -2.2
CTF4YPR135W VPH2P32341 215 aa1.28□□□□□ -2.2
CTF4YPR135W NUF2P33895 451 aa1.28□□□□□ -2.2
CTF4YPR135W SRP102P36057 244 aaPredicted RBP1.28□□□□□ -2.2
CTF4YPR135W SHE1P38200 338 aa1.28□□□□□ -2.2
CTF4YPR135W POP8P38208 133 aa1.28□□□□□ -2.2
CTF4YPR135W BXI1P48558 297 aa1.28□□□□□ -2.2
CTF4YPR135W CRH1P53301 507 aa1.28□□□□□ -2.2
CTF4YPR135W YDR248CQ03786 193 aa1.28□□□□□ -2.2
CTF4YPR135W YDR249CQ03787 373 aa1.28□□□□□ -2.2
CTF4YPR135W PAL1Q05518 499 aaKnown RBP1.28□□□□□ -2.2
CTF4YPR135W PBA1Q05778 276 aa1.28□□□□□ -2.2
CTF4YPR135W YET3Q07451 203 aa1.28□□□□□ -2.2
CTF4YPR135W FDH1Q08911 376 aa1.28□□□□□ -2.2
CTF4YPR135W YDL180WQ12301 547 aa1.28□□□□□ -2.2
CTF4YPR135W RAD10P06838 210 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms