RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	YBR220C	P38318	560 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	COS8	P38723	381 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	TIM17	P39515	158 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	YIL012W	P40551	113 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	GLR1	P41921	483 aa	Known RBP	4.9	□□□□□ -1.63
TFB4	YPR056W	YFR054C	P43622	192 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	YGR039W	P53225	103 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	FMP48	P53233	369 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	VHS1	Q03785	461 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	AIM36	Q03798	255 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	TY1B-H	O13535	1793 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	SNC2	P33328	115 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	AST2	P39945	430 aa	Known RBP	4.89	□□□□□ -1.63
TFB4	YPR056W	VPS71	Q03433	280 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	TMA23	Q03525	211 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	YPR114W	Q06107	315 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	ATG39	Q06159	398 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	SRL1	Q08673	210 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	ATX2	Q12067	313 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	YDL180W	Q12301	547 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	TRM732	Q03496	1420 aa		4.89	□□□□□ -1.63
TFB4	YPR056W	Q0255	P03881	472 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	RPL42A	P0CX27	106 aa	Known RBP	4.88	□□□□□ -1.63
TFB4	YPR056W	RPL42B	P0CX28	106 aa	Known RBP	4.88	□□□□□ -1.63
TFB4	YPR056W	YBR063C	P38083	404 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	SER2	P42941	309 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	NCA3	P46955	337 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	XPT1	P47165	209 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	PAC10	P48363	199 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	RPS12	P48589	143 aa	Known RBP	4.88	□□□□□ -1.63
TFB4	YPR056W	DIG2	Q03373	323 aa	Known RBP	4.88	□□□□□ -1.63
TFB4	YPR056W	CGI121	Q03705	181 aa	Known RBP	4.88	□□□□□ -1.63
TFB4	YPR056W	YLR118C	Q12354	227 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	BOL1	Q3E793	110 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	YKL068W-A	Q3E826	78 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	TDA8	Q6B2U8	126 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	YIL177C	P40434	1758 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	YJL225C	P40889	1758 aa		4.88	□□□□□ -1.63
TFB4	YPR056W	CCH1	P50077	2039 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	FMP49	A0A023PZB3	126 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	TRP1	P00912	224 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	NSP1	P14907	823 aa	Known RBP	4.87	□□□□□ -1.63
TFB4	YPR056W	SEC17	P32602	292 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	PHO89	P38361	574 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	BAT1	P38891	393 aa	Known RBP	4.87	□□□□□ -1.63
TFB4	YPR056W	AIF1	P52923	378 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	ALG9	P53868	555 aa	Known RBP	4.87	□□□□□ -1.63
TFB4	YPR056W	YLR179C	Q06252	201 aa	Known RBP	4.87	□□□□□ -1.63
TFB4	YPR056W	MCH1	Q07376	486 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	YPL162C	Q12042	273 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	YPR011C	Q12251	326 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	SPP41	P38904	1435 aa		4.87	□□□□□ -1.63
TFB4	YPR056W	CBP6	P07253	162 aa	Predicted RBP	4.86	□□□□□ -1.63
TFB4	YPR056W	TIR1	P10863	254 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	TRS20	P38334	175 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	FLO5	P38894	1075 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	GGC1	P38988	300 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	YGL088W	P53151	121 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	CLD1	P53264	445 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	GAS3	Q03655	524 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	FSF1	Q12029	327 aa	Known RBP	4.86	□□□□□ -1.63
TFB4	YPR056W	TSC11	P40061	1430 aa		4.86	□□□□□ -1.63
TFB4	YPR056W	ADK1	P07170	222 aa	Known RBP	4.85	□□□□□ -1.63
TFB4	YPR056W	RPS8A	P0CX39	200 aa	Known RBP	4.85	□□□□□ -1.63
TFB4	YPR056W	RPS8B	P0CX40	200 aa	Known RBP	4.85	□□□□□ -1.63
TFB4	YPR056W	ATR1	P13090	542 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	PCL1	P24867	279 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	ERG2	P32352	222 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	TKL2	P33315	681 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	MIC19	P43594	170 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	RPA43	P46669	326 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	AIM11	P87275	137 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	SPC3	Q12133	184 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	YNL277W-A	Q3E7Z0	62 aa		4.85	□□□□□ -1.63
TFB4	YPR056W	LDB16	P25587	256 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	YPT31	P38555	223 aa	Known RBP	4.84	□□□□□ -1.63
TFB4	YPR056W	YHL026C	P38740	315 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	PTI1	P39927	425 aa	Predicted RBP	4.84	□□□□□ -1.63
TFB4	YPR056W	YNL208W	P40159	199 aa	Known RBP	4.84	□□□□□ -1.63
TFB4	YPR056W	PRM5	P40476	318 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	FIP1	P45976	327 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	COS10	P52924	374 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	LPP1	Q04396	274 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	YMR254C	Q04838	102 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	YFR032C-B	Q8TGU2	87 aa		4.84	□□□□□ -1.63
TFB4	YPR056W	HSL1	P34244	1518 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	HAP2	P06774	265 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	GPA2	P10823	449 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	YOR062C	P36025	268 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	YAE1	P47118	141 aa	Predicted RBP	4.83	□□□□□ -1.64
TFB4	YPR056W	YJR085C	P47131	105 aa	Known RBP	4.83	□□□□□ -1.64
TFB4	YPR056W	TTI2	P47168	421 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	YGR015C	P53208	328 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	YMR099C	Q03161	297 aa	Known RBP	4.83	□□□□□ -1.64
TFB4	YPR056W	INP1	Q03694	420 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	GRH1	Q04410	372 aa	Known RBP	4.83	□□□□□ -1.64
TFB4	YPR056W	DGK1	Q12382	290 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	YAL063C-A	Q3E791	96 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	HTL1	Q9URQ5	78 aa		4.83	□□□□□ -1.64
TFB4	YPR056W	BGL2	P15703	313 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms