RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeast

Gene IRC16, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC16	YPR038W	MDM35	O60200	86 aa		0.73	□□□□□ -2.29
IRC16	YPR038W	RPL28	P02406	149 aa	Known RBP	0.73	□□□□□ -2.29
IRC16	YPR038W	YHR212W-A	P0CX91	67 aa		0.73	□□□□□ -2.29
IRC16	YPR038W	ALG13	P53178	202 aa		0.73	□□□□□ -2.29
IRC16	YPR038W	YPR174C	Q06616	221 aa	Predicted RBP	0.73	□□□□□ -2.29
IRC16	YPR038W	SLH1	P53327	1967 aa	Known RBP	0.73	□□□□□ -2.29
IRC16	YPR038W	CFT1	Q06632	1357 aa	Known RBP	0.72	□□□□□ -2.29
IRC16	YPR038W	SEC4	P07560	215 aa	Known RBP	0.72	□□□□□ -2.29
IRC16	YPR038W	RPL27A	P0C2H6	136 aa	Known RBP	0.72	□□□□□ -2.29
IRC16	YPR038W	GCN3	P14741	305 aa		0.72	□□□□□ -2.29
IRC16	YPR038W	YMR31	P19955	123 aa		0.72	□□□□□ -2.29
IRC16	YPR038W	CKS1	P20486	150 aa	Known RBP	0.72	□□□□□ -2.29
IRC16	YPR038W	MAG1	P22134	296 aa	Known RBP	0.72	□□□□□ -2.29
IRC16	YPR038W	YER085C	P40058	173 aa		0.72	□□□□□ -2.29
IRC16	YPR038W	IKI3	Q06706	1349 aa	Known RBP	0.71	□□□□□ -2.3
IRC16	YPR038W	THP2	O13539	261 aa	Known RBP	0.71	□□□□□ -2.3
IRC16	YPR038W	CDC36	P06100	191 aa	Predicted RBP	0.71	□□□□□ -2.3
IRC16	YPR038W	RHO1	P06780	209 aa	Known RBP	0.71	□□□□□ -2.3
IRC16	YPR038W	ATP15	P21306	62 aa		0.71	□□□□□ -2.3
IRC16	YPR038W	PPA2	P28239	310 aa		0.71	□□□□□ -2.3
IRC16	YPR038W	MGM101	P32787	269 aa	Known RBP	0.71	□□□□□ -2.3
IRC16	YPR038W	YRB1	P41920	201 aa	Known RBP	0.71	□□□□□ -2.3
IRC16	YPR038W	YFH7	P43591	353 aa		0.71	□□□□□ -2.3
IRC16	YPR038W	YOL160W	Q08321	113 aa		0.71	□□□□□ -2.3
IRC16	YPR038W	SEY1	Q99287	776 aa		0.71	□□□□□ -2.3
IRC16	YPR038W	YIL177C	P40434	1758 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	YJL225C	P40889	1758 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	RPL25	P04456	142 aa	Known RBP	0.7	□□□□□ -2.3
IRC16	YPR038W	MIC12	P38341	106 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	YPL073C	P40323	161 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	IRC18	P47056	224 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	COG5	P53951	403 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	YMR252C	Q04814	134 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	YRA1	Q12159	226 aa	Known RBP	0.7	□□□□□ -2.3
IRC16	YPR038W	JLP1	Q12358	412 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	YFR032C-B	Q8TGU2	87 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	ODC2	Q99297	307 aa		0.7	□□□□□ -2.3
IRC16	YPR038W	YBR121C-A	P0C5L4	52 aa		0.69	□□□□□ -2.3
IRC16	YPR038W	SPO13	P23624	291 aa		0.69	□□□□□ -2.3
IRC16	YPR038W	TRM5	P38793	499 aa		0.69	□□□□□ -2.3
IRC16	YPR038W	TVP23	P38962	199 aa		0.69	□□□□□ -2.3
IRC16	YPR038W	PDR17	P53844	350 aa		0.69	□□□□□ -2.3
IRC16	YPR038W	STP22	P25604	385 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	HPA3	P39979	161 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	HMF1	P40037	129 aa	Known RBP	0.68	□□□□□ -2.3
IRC16	YPR038W	AIM25	P47140	327 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	MGA1	P53050	456 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	LSM7	P53905	115 aa	Known RBP	0.68	□□□□□ -2.3
IRC16	YPR038W	HNT1	Q04344	158 aa	Known RBP	0.68	□□□□□ -2.3
IRC16	YPR038W	DGA1	Q08650	418 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	YHR214C-E	Q8TGK0	99 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	NCB2	Q92317	146 aa		0.68	□□□□□ -2.3
IRC16	YPR038W	PRX1	P34227	261 aa	Known RBP	0.67	□□□□□ -2.3
IRC16	YPR038W	ADO1	P47143	340 aa	Known RBP	0.67	□□□□□ -2.3
IRC16	YPR038W	UBC12	P52491	188 aa		0.67	□□□□□ -2.3
IRC16	YPR038W	MPC3	P53311	146 aa		0.67	□□□□□ -2.3
IRC16	YPR038W	DAD4	P69851	72 aa		0.67	□□□□□ -2.3
IRC16	YPR038W	LCL2	Q08045	131 aa		0.67	□□□□□ -2.3
IRC16	YPR038W	YNG1	Q08465	219 aa		0.67	□□□□□ -2.3
IRC16	YPR038W	MDM32	Q12171	622 aa		0.67	□□□□□ -2.3
IRC16	YPR038W	YCR090C	P25654	182 aa	Known RBP	0.66	□□□□□ -2.3
IRC16	YPR038W	RTC3	P38804	111 aa	Predicted RBP	0.66	□□□□□ -2.3
IRC16	YPR038W	GET1	P53192	235 aa		0.66	□□□□□ -2.3
IRC16	YPR038W	YKL183C-A	Q3E765	70 aa		0.66	□□□□□ -2.3
IRC16	YPR038W	POR1	P04840	283 aa	Known RBP	0.65	□□□□□ -2.31
IRC16	YPR038W	NHP6B	P11633	99 aa	Known RBP	0.65	□□□□□ -2.31
IRC16	YPR038W	OCH1	P31755	480 aa		0.65	□□□□□ -2.31
IRC16	YPR038W	PAN3	P36102	679 aa	Predicted RBP	0.65	□□□□□ -2.31
IRC16	YPR038W	ERG28	P40030	148 aa		0.65	□□□□□ -2.31
IRC16	YPR038W	PET191	Q02772	108 aa		0.65	□□□□□ -2.31
IRC16	YPR038W	PRP11	Q07350	266 aa	Predicted RBP	0.65	□□□□□ -2.31
IRC16	YPR038W	RPB7	P34087	171 aa		0.64	□□□□□ -2.31
IRC16	YPR038W	BMH2	P34730	273 aa	Known RBP	0.64	□□□□□ -2.31
IRC16	YPR038W	YHL018W	P38744	120 aa	Predicted RBP	0.64	□□□□□ -2.31
IRC16	YPR038W	YEA4	P40004	342 aa		0.64	□□□□□ -2.31
IRC16	YPR038W	OTU1	P43558	301 aa		0.64	□□□□□ -2.31
IRC16	YPR038W	DYN3	Q04949	312 aa		0.64	□□□□□ -2.31
IRC16	YPR038W	FAS1	P07149	2051 aa	Known RBP	0.64	□□□□□ -2.31
IRC16	YPR038W	MER1	P16523	270 aa		0.63	□□□□□ -2.31
IRC16	YPR038W	STE18	P18852	110 aa		0.63	□□□□□ -2.31
IRC16	YPR038W	YPK2	P18961	677 aa		0.63	□□□□□ -2.31
IRC16	YPR038W	YCL042W	P25572	119 aa		0.63	□□□□□ -2.31
IRC16	YPR038W	AIM2	P39721	246 aa		0.63	□□□□□ -2.31
IRC16	YPR038W	RTR1	P40084	226 aa	Predicted RBP	0.63	□□□□□ -2.31
IRC16	YPR038W	ERG10	P41338	398 aa	Known RBP	0.63	□□□□□ -2.31
IRC16	YPR038W	UPS3	Q04006	179 aa		0.63	□□□□□ -2.31
IRC16	YPR038W	MRPL15	P36523	253 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	YNL194C	P40169	301 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	YLR460C	P54007	376 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	YMR295C	Q03559	197 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	YMR226C	Q05016	267 aa	Known RBP	0.62	□□□□□ -2.31
IRC16	YPR038W	FUS2	Q05670	677 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	IRC23	Q08416	157 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	COA3	Q3E7B2	85 aa		0.62	□□□□□ -2.31
IRC16	YPR038W	COX8	P04039	78 aa		0.61	□□□□□ -2.31
IRC16	YPR038W	PHO85	P17157	305 aa		0.61	□□□□□ -2.31
IRC16	YPR038W	SFK1	P35735	353 aa		0.61	□□□□□ -2.31
IRC16	YPR038W	YCR087C-A	P37263	153 aa		0.61	□□□□□ -2.31
IRC16	YPR038W	YEL008W	P40001	126 aa		0.61	□□□□□ -2.31
IRC16	YPR038W	YER134C	P40081	178 aa		0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms