RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C YDR274CP87283 123 aa1.69□□□□□ -2.14
RPN8YOR261C SWR1Q05471 1514 aa1.69□□□□□ -2.14
RPN8YOR261C ATP15P21306 62 aa1.68□□□□□ -2.14
RPN8YOR261C VMA22P38784 181 aa1.68□□□□□ -2.14
RPN8YOR261C MSS2P40990 351 aa1.68□□□□□ -2.14
RPN8YOR261C TIM11P81449 96 aaPredicted RBP1.68□□□□□ -2.14
RPN8YOR261C YNG1Q08465 219 aa1.68□□□□□ -2.14
RPN8YOR261C HSL1P34244 1518 aa1.67□□□□□ -2.14
RPN8YOR261C STE18P18852 110 aa1.67□□□□□ -2.14
RPN8YOR261C COQ1P18900 473 aa1.67□□□□□ -2.14
RPN8YOR261C PTM1P32857 523 aa1.67□□□□□ -2.14
RPN8YOR261C PRP18P33411 251 aaPredicted RBP1.67□□□□□ -2.14
RPN8YOR261C TVP38P36164 337 aa1.67□□□□□ -2.14
RPN8YOR261C AST2P39945 430 aaKnown RBP1.67□□□□□ -2.14
RPN8YOR261C LSM7P53905 115 aaKnown RBP1.67□□□□□ -2.14
RPN8YOR261C COG5P53951 403 aa1.67□□□□□ -2.14
RPN8YOR261C SPA2P23201 1466 aaKnown RBP1.67□□□□□ -2.14
RPN8YOR261C SPT6P23615 1451 aaKnown RBP1.67□□□□□ -2.14
RPN8YOR261C MSB2P32334 1306 aa1.66□□□□□ -2.14
RPN8YOR261C VAR1P02381 398 aa1.66□□□□□ -2.14
RPN8YOR261C CDC33P07260 213 aaKnown RBP1.66□□□□□ -2.14
RPN8YOR261C GCN20P43535 752 aaKnown RBP1.66□□□□□ -2.14
RPN8YOR261C CWC23P52868 283 aaPredicted RBP1.66□□□□□ -2.14
RPN8YOR261C RNH1Q04740 348 aa1.66□□□□□ -2.14
RPN8YOR261C DNA2P38859 1522 aa1.66□□□□□ -2.14
RPN8YOR261C SSN2P38931 1420 aa1.66□□□□□ -2.14
RPN8YOR261C KOG1P38873 1557 aa1.65□□□□□ -2.15
RPN8YOR261C RPL27AP0C2H6 136 aaKnown RBP1.65□□□□□ -2.15
RPN8YOR261C SEC11P15367 167 aa1.65□□□□□ -2.15
RPN8YOR261C MGM101P32787 269 aaKnown RBP1.65□□□□□ -2.15
RPN8YOR261C RIO2P40160 425 aaKnown RBP1.65□□□□□ -2.15
RPN8YOR261C YNL146C-AQ3E7Z1 64 aa1.65□□□□□ -2.15
RPN8YOR261C ARG80P07249 177 aa1.64□□□□□ -2.15
RPN8YOR261C OPY1P38271 328 aa1.64□□□□□ -2.15
RPN8YOR261C CUE4Q04201 117 aaPredicted RBP1.64□□□□□ -2.15
RPN8YOR261C RAD28Q12021 506 aa1.64□□□□□ -2.15
RPN8YOR261C ACC1Q00955 2233 aaKnown RBP1.63□□□□□ -2.15
RPN8YOR261C HIR3P47171 1648 aa1.63□□□□□ -2.15
RPN8YOR261C MER1P16523 270 aa1.63□□□□□ -2.15
RPN8YOR261C KDX1P36005 433 aa1.63□□□□□ -2.15
RPN8YOR261C GRX3Q03835 250 aa1.63□□□□□ -2.15
RPN8YOR261C XRN1P22147 1528 aaKnown RBP1.62□□□□□ -2.15
RPN8YOR261C RPL25P04456 142 aaKnown RBP1.62□□□□□ -2.15
RPN8YOR261C AQY2P0CD90 149 aa1.62□□□□□ -2.15
RPN8YOR261C MAG1P22134 296 aaKnown RBP1.62□□□□□ -2.15
RPN8YOR261C TAF14P35189 244 aa1.62□□□□□ -2.15
RPN8YOR261C YOL160WQ08321 113 aa1.62□□□□□ -2.15
RPN8YOR261C RUD3Q12234 484 aaKnown RBP1.62□□□□□ -2.15
RPN8YOR261C THO2P53552 1597 aaKnown RBP1.61□□□□□ -2.15
RPN8YOR261C BUD4P47136 1447 aa1.61□□□□□ -2.15
RPN8YOR261C SPS18P32572 300 aa1.61□□□□□ -2.15
RPN8YOR261C TRM5P38793 499 aa1.61□□□□□ -2.15
RPN8YOR261C YER034WP40022 185 aaKnown RBP1.61□□□□□ -2.15
RPN8YOR261C FLX1P40464 311 aa1.61□□□□□ -2.15
RPN8YOR261C FAS1P07149 2051 aaKnown RBP1.61□□□□□ -2.15
RPN8YOR261C CKS1P20486 150 aaKnown RBP1.6□□□□□ -2.15
RPN8YOR261C YCR087C-AP37263 153 aa1.6□□□□□ -2.15
RPN8YOR261C IKI1P38874 309 aa1.6□□□□□ -2.15
RPN8YOR261C ERG10P41338 398 aaKnown RBP1.6□□□□□ -2.15
RPN8YOR261C MPC3P53311 146 aa1.6□□□□□ -2.15
RPN8YOR261C GGA1Q06336 557 aa1.6□□□□□ -2.15
RPN8YOR261C REV3P14284 1504 aa1.6□□□□□ -2.15
RPN8YOR261C SIN3P22579 1536 aa1.6□□□□□ -2.15
RPN8YOR261C YIL177CP40434 1758 aa1.59□□□□□ -2.15
RPN8YOR261C YJL225CP40889 1758 aa1.59□□□□□ -2.15
RPN8YOR261C ECM5Q03214 1411 aa1.59□□□□□ -2.15
RPN8YOR261C YAE1P47118 141 aaPredicted RBP1.59□□□□□ -2.15
RPN8YOR261C HNT1Q04344 158 aaKnown RBP1.59□□□□□ -2.15
RPN8YOR261C MDM32Q12171 622 aa1.59□□□□□ -2.15
RPN8YOR261C MDS3P53094 1487 aa1.58□□□□□ -2.16
RPN8YOR261C NTG1P31378 399 aa1.58□□□□□ -2.16
RPN8YOR261C YEL067CP39978 195 aa1.58□□□□□ -2.16
RPN8YOR261C HMF1P40037 129 aaKnown RBP1.58□□□□□ -2.16
RPN8YOR261C PGA2P53903 129 aa1.58□□□□□ -2.16
RPN8YOR261C YHR007C-AQ07074 71 aa1.58□□□□□ -2.16
RPN8YOR261C ODC2Q99297 307 aa1.58□□□□□ -2.16
RPN8YOR261C SSK2P53599 1579 aa1.57□□□□□ -2.16
RPN8YOR261C ATG2P53855 1592 aa1.57□□□□□ -2.16
RPN8YOR261C SPO13P23624 291 aa1.57□□□□□ -2.16
RPN8YOR261C RFA3P26755 122 aaKnown RBP1.57□□□□□ -2.16
RPN8YOR261C GIS3Q12418 502 aa1.57□□□□□ -2.16
RPN8YOR261C PEP1P32319 1579 aa1.56□□□□□ -2.16
RPN8YOR261C POR1P04840 283 aaKnown RBP1.56□□□□□ -2.16
RPN8YOR261C OCH1P31755 480 aa1.56□□□□□ -2.16
RPN8YOR261C YKT6P36015 200 aaKnown RBP1.56□□□□□ -2.16
RPN8YOR261C YFL065CP43539 102 aa1.56□□□□□ -2.16
RPN8YOR261C AIM25P47140 327 aa1.56□□□□□ -2.16
RPN8YOR261C ARO8P53090 500 aaKnown RBP1.56□□□□□ -2.16
RPN8YOR261C RCE1Q03530 315 aa1.56□□□□□ -2.16
RPN8YOR261C DGA1Q08650 418 aa1.56□□□□□ -2.16
RPN8YOR261C SKI3P17883 1432 aaKnown RBP1.56□□□□□ -2.16
RPN8YOR261C TAF2P23255 1407 aa1.56□□□□□ -2.16
RPN8YOR261C MYO2P19524 1574 aaKnown RBP1.55□□□□□ -2.16
RPN8YOR261C RPB4P20433 221 aaPredicted RBP1.55□□□□□ -2.16
RPN8YOR261C YHL042WP38729 150 aa1.55□□□□□ -2.16
RPN8YOR261C EDC3P39998 551 aaKnown RBP1.55□□□□□ -2.16
RPN8YOR261C YNL247WP53852 767 aaKnown RBP1.55□□□□□ -2.16
RPN8YOR261C CWC27Q02770 301 aa1.55□□□□□ -2.16
RPN8YOR261C CWC21Q03375 135 aaKnown RBP1.55□□□□□ -2.16
RPN8YOR261C IKI3Q06706 1349 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms