RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W Q0144Q9ZZW2 109 aa2.55□□□□□ -2
MSH2YOL090W RPL2AP0CX45 254 aaKnown RBP2.54□□□□□ -2
MSH2YOL090W RPL2BP0CX46 254 aaKnown RBP2.54□□□□□ -2
MSH2YOL090W BGL2P15703 313 aaKnown RBP2.54□□□□□ -2
MSH2YOL090W IMP1P28627 190 aa2.54□□□□□ -2
MSH2YOL090W YKL102CP34249 101 aa2.54□□□□□ -2
MSH2YOL090W PRY2P36110 329 aa2.54□□□□□ -2
MSH2YOL090W CSH1P38287 376 aa2.54□□□□□ -2
MSH2YOL090W YNL010WP53981 241 aaKnown RBP2.54□□□□□ -2
MSH2YOL090W EMI1Q04406 187 aa2.54□□□□□ -2
MSH2YOL090W NEJ1Q06148 342 aa2.54□□□□□ -2
MSH2YOL090W PRR2Q12310 699 aa2.54□□□□□ -2
MSH2YOL090W CCH1P50077 2039 aa2.54□□□□□ -2
MSH2YOL090W SIR2P06700 562 aa2.54□□□□□ -2
MSH2YOL090W CPR4P25334 318 aa2.54□□□□□ -2
MSH2YOL090W TRS20P38334 175 aa2.54□□□□□ -2
MSH2YOL090W IRC22P40006 225 aa2.54□□□□□ -2
MSH2YOL090W YIL152WP40455 235 aa2.54□□□□□ -2
MSH2YOL090W RBL2P48606 106 aaKnown RBP2.54□□□□□ -2
MSH2YOL090W MRX11Q03079 207 aa2.54□□□□□ -2
MSH2YOL090W MAK3Q03503 176 aa2.54□□□□□ -2
MSH2YOL090W GOT1Q03554 138 aa2.54□□□□□ -2
MSH2YOL090W VHS1Q03785 461 aa2.54□□□□□ -2
MSH2YOL090W YMR244WQ04018 355 aa2.54□□□□□ -2
MSH2YOL090W YDR124WQ04608 324 aa2.54□□□□□ -2
MSH2YOL090W YPL257WQ08974 193 aa2.54□□□□□ -2
MSH2YOL090W MDM32Q12171 622 aa2.54□□□□□ -2
MSH2YOL090W TIM22Q12328 207 aa2.54□□□□□ -2
MSH2YOL090W YBL008W-AQ3E821 79 aa2.54□□□□□ -2
MSH2YOL090W UBR2Q07963 1872 aa2.53□□□□□ -2
MSH2YOL090W RPB5P20434 215 aa2.53□□□□□ -2
MSH2YOL090W YGP1P38616 354 aaKnown RBP2.53□□□□□ -2
MSH2YOL090W YND1P40009 630 aa2.53□□□□□ -2
MSH2YOL090W YIL012WP40551 113 aa2.53□□□□□ -2
MSH2YOL090W ORM1P53224 222 aa2.53□□□□□ -2
MSH2YOL090W YDR476CQ03362 224 aa2.53□□□□□ -2
MSH2YOL090W HPT1Q04178 221 aaKnown RBP2.53□□□□□ -2
MSH2YOL090W HRD1Q08109 551 aa2.53□□□□□ -2
MSH2YOL090W PST2Q12335 198 aaKnown RBP2.53□□□□□ -2
MSH2YOL090W YBL112CQ3E7Y4 105 aa2.53□□□□□ -2
MSH2YOL090W RPL25P04456 142 aaKnown RBP2.53□□□□□ -2
MSH2YOL090W LDB16P25587 256 aa2.53□□□□□ -2
MSH2YOL090W HSP30P25619 332 aa2.53□□□□□ -2
MSH2YOL090W SMP1P38128 452 aa2.53□□□□□ -2
MSH2YOL090W YER186CP40101 306 aa2.53□□□□□ -2
MSH2YOL090W RPA43P46669 326 aa2.53□□□□□ -2
MSH2YOL090W YJR015WP47090 510 aa2.53□□□□□ -2
MSH2YOL090W ACT1P60010 375 aaKnown RBP2.53□□□□□ -2
MSH2YOL090W MRX8Q05473 314 aa2.53□□□□□ -2
MSH2YOL090W DGA1Q08650 418 aa2.53□□□□□ -2
MSH2YOL090W YOR342CQ12182 319 aa2.53□□□□□ -2
MSH2YOL090W SNF4P12904 322 aa2.52□□□□□ -2.01
MSH2YOL090W SEC14P24280 304 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W UGX2P32772 223 aa2.52□□□□□ -2.01
MSH2YOL090W TVP38P36164 337 aa2.52□□□□□ -2.01
MSH2YOL090W AST2P39945 430 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W ALB1P47019 175 aaPredicted RBP2.52□□□□□ -2.01
MSH2YOL090W YGL101WP53144 215 aa2.52□□□□□ -2.01
MSH2YOL090W UBC7Q02159 165 aa2.52□□□□□ -2.01
MSH2YOL090W YLR179CQ06252 201 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W SUE1Q06524 206 aa2.52□□□□□ -2.01
MSH2YOL090W MBF1O14467 151 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W CDC8P00572 216 aa2.52□□□□□ -2.01
MSH2YOL090W ATG22P25568 528 aa2.52□□□□□ -2.01
MSH2YOL090W SUA7P29055 345 aaPredicted RBP2.52□□□□□ -2.01
MSH2YOL090W YBR285WP38354 144 aa2.52□□□□□ -2.01
MSH2YOL090W YHL044WP38727 235 aa2.52□□□□□ -2.01
MSH2YOL090W RMD6P39975 231 aa2.52□□□□□ -2.01
MSH2YOL090W HMF1P40037 129 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W YNL208WP40159 199 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W ARO8P53090 500 aaKnown RBP2.52□□□□□ -2.01
MSH2YOL090W CLD1P53264 445 aa2.52□□□□□ -2.01
MSH2YOL090W YPL039WQ03080 316 aa2.52□□□□□ -2.01
MSH2YOL090W FMN1Q03778 218 aa2.52□□□□□ -2.01
MSH2YOL090W HMS1Q12398 434 aa2.52□□□□□ -2.01
MSH2YOL090W YER078W-AQ3E7A2 54 aa2.52□□□□□ -2.01
MSH2YOL090W NAG1Q8TGN9 163 aa2.52□□□□□ -2.01
MSH2YOL090W IPP1P00817 287 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W EFM1P38732 585 aa2.51□□□□□ -2.01
MSH2YOL090W PHB1P40961 287 aa2.51□□□□□ -2.01
MSH2YOL090W STB1P42845 420 aa2.51□□□□□ -2.01
MSH2YOL090W IMP4P53941 290 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W RRG7Q08774 242 aaPredicted RBP2.51□□□□□ -2.01
MSH2YOL090W ATG5Q12380 294 aa2.51□□□□□ -2.01
MSH2YOL090W MPD1Q12404 318 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W YFR032C-BQ8TGU2 87 aa2.51□□□□□ -2.01
MSH2YOL090W PDR18P53756 1333 aa2.51□□□□□ -2.01
MSH2YOL090W PEX34P25584 144 aa2.51□□□□□ -2.01
MSH2YOL090W UTP30P36144 274 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W BAT1P38891 393 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W HPM1P40481 377 aa2.51□□□□□ -2.01
MSH2YOL090W SDT1P53078 280 aa2.51□□□□□ -2.01
MSH2YOL090W PGA1P53896 198 aa2.51□□□□□ -2.01
MSH2YOL090W DID2P69771 204 aa2.51□□□□□ -2.01
MSH2YOL090W FMP42Q04991 504 aa2.51□□□□□ -2.01
MSH2YOL090W SCL1P21243 252 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W SPO13P23624 291 aa2.51□□□□□ -2.01
MSH2YOL090W OCH1P31755 480 aa2.51□□□□□ -2.01
MSH2YOL090W YEA4P40004 342 aa2.51□□□□□ -2.01
MSH2YOL090W APQ12P40532 138 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms