RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C BAT2P47176 376 aaKnown RBP1.31□□□□□ -2.2
RPB11YOL005C RMR1P53060 241 aa1.31□□□□□ -2.2
RPB11YOL005C GTR2P53290 341 aa1.31□□□□□ -2.2
RPB11YOL005C YNL046WP53956 172 aa1.31□□□□□ -2.2
RPB11YOL005C PET117Q02771 107 aa1.31□□□□□ -2.2
RPB11YOL005C SEI1Q06058 285 aa1.31□□□□□ -2.2
RPB11YOL005C YPR172WQ06608 200 aa1.31□□□□□ -2.2
RPB11YOL005C MSA1Q08471 629 aa1.31□□□□□ -2.2
RPB11YOL005C HTL1Q9URQ5 78 aa1.31□□□□□ -2.2
RPB11YOL005C POL2P21951 2222 aaKnown RBP1.3□□□□□ -2.2
RPB11YOL005C TEL1P38110 2787 aa1.3□□□□□ -2.2
RPB11YOL005C RPL9AP05738 191 aaKnown RBP1.3□□□□□ -2.2
RPB11YOL005C RPL22AP05749 121 aaKnown RBP1.3□□□□□ -2.2
RPB11YOL005C CMD1P06787 147 aaKnown RBP1.3□□□□□ -2.2
RPB11YOL005C FCY2P17064 533 aa1.3□□□□□ -2.2
RPB11YOL005C YCR099CP25657 155 aa1.3□□□□□ -2.2
RPB11YOL005C MGT1P26188 188 aa1.3□□□□□ -2.2
RPB11YOL005C PRP18P33411 251 aaPredicted RBP1.3□□□□□ -2.2
RPB11YOL005C CUE1P38428 203 aa1.3□□□□□ -2.2
RPB11YOL005C AIM18P38884 321 aa1.3□□□□□ -2.2
RPB11YOL005C CYC2P38909 366 aa1.3□□□□□ -2.2
RPB11YOL005C YIL001WP40560 513 aa1.3□□□□□ -2.2
RPB11YOL005C CAT5P41735 233 aa1.3□□□□□ -2.2
RPB11YOL005C HOC1P47124 396 aa1.3□□□□□ -2.2
RPB11YOL005C TRM9P49957 279 aa1.3□□□□□ -2.2
RPB11YOL005C RPL9BP51401 191 aaKnown RBP1.3□□□□□ -2.2
RPB11YOL005C LDB18Q07887 179 aa1.3□□□□□ -2.2
RPB11YOL005C YIL046W-AQ3E7Z4 54 aa1.3□□□□□ -2.2
RPB11YOL005C CPA1P07258 411 aaKnown RBP1.29□□□□□ -2.2
RPB11YOL005C CBF1P17106 351 aa1.29□□□□□ -2.2
RPB11YOL005C PHO13P19881 312 aa1.29□□□□□ -2.2
RPB11YOL005C MRPL25P23369 157 aa1.29□□□□□ -2.2
RPB11YOL005C PEX4P29340 183 aa1.29□□□□□ -2.2
RPB11YOL005C YPT52P36018 234 aaKnown RBP1.29□□□□□ -2.2
RPB11YOL005C TCD1P38756 429 aa1.29□□□□□ -2.2
RPB11YOL005C FMC1P40491 155 aa1.29□□□□□ -2.2
RPB11YOL005C PHB1P40961 287 aa1.29□□□□□ -2.2
RPB11YOL005C ILM1P47155 203 aa1.29□□□□□ -2.2
RPB11YOL005C NUP84P52891 726 aa1.29□□□□□ -2.2
RPB11YOL005C MRPS8Q03799 155 aa1.29□□□□□ -2.2
RPB11YOL005C KRE28Q04431 385 aa1.29□□□□□ -2.2
RPB11YOL005C SSQ1Q05931 657 aaPredicted RBP1.29□□□□□ -2.2
RPB11YOL005C NIP7Q08962 181 aaKnown RBP1.29□□□□□ -2.2
RPB11YOL005C QCR6P00127 147 aa1.28□□□□□ -2.2
RPB11YOL005C MSW1P04803 379 aa1.28□□□□□ -2.2
RPB11YOL005C BCY1P07278 416 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C MATALPHA1P0CY06 175 aa1.28□□□□□ -2.2
RPB11YOL005C HMLALPHA1P0CY07 175 aa1.28□□□□□ -2.2
RPB11YOL005C FBA1P14540 359 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C SEC14P24280 304 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C RPS5P26783 225 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C RIB1P38066 345 aa1.28□□□□□ -2.2
RPB11YOL005C POP4P38336 279 aa1.28□□□□□ -2.2
RPB11YOL005C CTR2P38865 189 aa1.28□□□□□ -2.2
RPB11YOL005C YEL073CP39974 107 aa1.28□□□□□ -2.2
RPB11YOL005C GIM4P40005 111 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C YRB1P41920 201 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C NSA1P53136 463 aaPredicted RBP1.28□□□□□ -2.2
RPB11YOL005C YGR219WP53307 113 aa1.28□□□□□ -2.2
RPB11YOL005C YNL247WP53852 767 aaKnown RBP1.28□□□□□ -2.2
RPB11YOL005C CSN9Q03981 162 aa1.28□□□□□ -2.2
RPB11YOL005C TRM12Q04235 462 aa1.28□□□□□ -2.2
RPB11YOL005C BOL1Q3E793 110 aa1.28□□□□□ -2.2
RPB11YOL005C YOR020W-AQ3E824 90 aa1.28□□□□□ -2.2
RPB11YOL005C RAS2P01120 322 aaKnown RBP1.27□□□□□ -2.21
RPB11YOL005C ERD2P18414 219 aa1.27□□□□□ -2.21
RPB11YOL005C SCL1P21243 252 aaKnown RBP1.27□□□□□ -2.21
RPB11YOL005C MGM101P32787 269 aaKnown RBP1.27□□□□□ -2.21
RPB11YOL005C PTM1P32857 523 aa1.27□□□□□ -2.21
RPB11YOL005C MAK5P38112 773 aaPredicted RBP1.27□□□□□ -2.21
RPB11YOL005C RPC17P47076 161 aa1.27□□□□□ -2.21
RPB11YOL005C HAM1P47119 197 aaKnown RBP1.27□□□□□ -2.21
RPB11YOL005C LIA1P47120 325 aaKnown RBP1.27□□□□□ -2.21
RPB11YOL005C SRL4Q03085 281 aa1.27□□□□□ -2.21
RPB11YOL005C GRX8Q05926 109 aa1.27□□□□□ -2.21
RPB11YOL005C DAS2Q12084 232 aa1.27□□□□□ -2.21
RPB11YOL005C YPR170W-BP0C5R9 85 aa1.26□□□□□ -2.21
RPB11YOL005C CDC10P25342 322 aaKnown RBP1.26□□□□□ -2.21
RPB11YOL005C OAC1P32332 324 aa1.26□□□□□ -2.21
RPB11YOL005C MDH3P32419 343 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
RPB11YOL005C YKL075CP36083 450 aa1.26□□□□□ -2.21
RPB11YOL005C YBR063CP38083 404 aa1.26□□□□□ -2.21
RPB11YOL005C VTC1P40046 129 aaRIP-Chip data1.26□□□□□ -2.21not detected
RPB11YOL005C PRM10P42946 383 aa1.26□□□□□ -2.21
RPB11YOL005C ERG25P53045 309 aa1.26□□□□□ -2.21
RPB11YOL005C BOL2P53082 120 aa1.26□□□□□ -2.21
RPB11YOL005C ERV29P53337 310 aa1.26□□□□□ -2.21
RPB11YOL005C DAD3P69850 94 aa1.26□□□□□ -2.21
RPB11YOL005C CYT2Q00873 224 aa1.26□□□□□ -2.21
RPB11YOL005C MET31Q03081 177 aa1.26□□□□□ -2.21
RPB11YOL005C YMD8Q03697 442 aa1.26□□□□□ -2.21
RPB11YOL005C HPT1Q04178 221 aaKnown RBP1.26□□□□□ -2.21
RPB11YOL005C SML1Q04964 104 aa1.26□□□□□ -2.21
RPB11YOL005C CDC123Q05791 360 aa1.26□□□□□ -2.21
RPB11YOL005C YET3Q07451 203 aa1.26□□□□□ -2.21
RPB11YOL005C YMR030W-AQ3E760 96 aa1.26□□□□□ -2.21
RPB11YOL005C DYN1P36022 4092 aa1.25□□□□□ -2.21
RPB11YOL005C TRX3P25372 127 aa1.25□□□□□ -2.21
RPB11YOL005C UBC6P33296 250 aaPredicted RBP1.25□□□□□ -2.21
RPB11YOL005C ETR1P38071 380 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms