RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C ADE1P27616 306 aa3.22□□□□□ -1.89
CIT1YNR001C FUN26P31381 517 aa3.22□□□□□ -1.89
CIT1YNR001C CDC13P32797 924 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C SDH3P33421 198 aa3.22□□□□□ -1.89
CIT1YNR001C YKL075CP36083 450 aa3.22□□□□□ -1.89
CIT1YNR001C MIX23P38162 196 aa3.22□□□□□ -1.89
CIT1YNR001C YPT31P38555 223 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C EDC3P39998 551 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C IRC22P40006 225 aa3.22□□□□□ -1.89
CIT1YNR001C YFL067WP43537 175 aa3.22□□□□□ -1.89
CIT1YNR001C CDH1P53197 566 aa3.22□□□□□ -1.89
CIT1YNR001C SLX9P53251 210 aaPredicted RBP3.22□□□□□ -1.89
CIT1YNR001C TRM44Q02648 567 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C GRX5Q02784 150 aa3.22□□□□□ -1.89
CIT1YNR001C SEC13Q04491 297 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C YPR127WQ06494 345 aa3.22□□□□□ -1.89
CIT1YNR001C SWC7Q06707 132 aa3.22□□□□□ -1.89
CIT1YNR001C YDR157WA0A023PZE8 133 aa3.21□□□□□ -1.9
CIT1YNR001C RPS18AP0CX55 146 aaKnown RBP3.21□□□□□ -1.9
CIT1YNR001C RPS18BP0CX56 146 aaPredicted RBP3.21□□□□□ -1.9
CIT1YNR001C RFA3P26755 122 aaKnown RBP3.21□□□□□ -1.9
CIT1YNR001C YKL187CP34231 750 aa3.21□□□□□ -1.9
CIT1YNR001C DRE2P36152 348 aa3.21□□□□□ -1.9
CIT1YNR001C TRS20P38334 175 aa3.21□□□□□ -1.9
CIT1YNR001C MTC4P38335 694 aaKnown RBP3.21□□□□□ -1.9
CIT1YNR001C EMC5P40540 141 aa3.21□□□□□ -1.9
CIT1YNR001C YIR035CP40579 254 aa3.21□□□□□ -1.9
CIT1YNR001C GNA1P43577 159 aaPredicted RBP3.21□□□□□ -1.9
CIT1YNR001C IBA57P47158 497 aa3.21□□□□□ -1.9
CIT1YNR001C MDM34P53083 459 aa3.21□□□□□ -1.9
CIT1YNR001C FLC3P53121 802 aa3.21□□□□□ -1.9
CIT1YNR001C FMP48P53233 369 aa3.21□□□□□ -1.9
CIT1YNR001C VHT1P53241 593 aa3.21□□□□□ -1.9
CIT1YNR001C PAU12P53343 120 aa3.21□□□□□ -1.9
CIT1YNR001C ACT1P60010 375 aaKnown RBP3.21□□□□□ -1.9
CIT1YNR001C MET31Q03081 177 aa3.21□□□□□ -1.9
CIT1YNR001C UTP15Q04305 513 aaKnown RBP3.21□□□□□ -1.9
CIT1YNR001C DPP1Q05521 289 aa3.21□□□□□ -1.9
CIT1YNR001C YPR098CQ06089 161 aa3.21□□□□□ -1.9
CIT1YNR001C TAZ1Q06510 381 aa3.21□□□□□ -1.9
CIT1YNR001C YLR036CQ07986 203 aa3.21□□□□□ -1.9
CIT1YNR001C FDH1Q08911 376 aa3.21□□□□□ -1.9
CIT1YNR001C FRE8Q12209 686 aa3.21□□□□□ -1.9
CIT1YNR001C YGL194C-AQ2V2P6 80 aa3.21□□□□□ -1.9
CIT1YNR001C YLR099W-AQ3E798 87 aa3.21□□□□□ -1.9
CIT1YNR001C EPT1P22140 391 aa3.2□□□□□ -1.9
CIT1YNR001C YCR102CP25608 368 aa3.2□□□□□ -1.9
CIT1YNR001C CDC50P25656 391 aa3.2□□□□□ -1.9
CIT1YNR001C TKL2P33315 681 aa3.2□□□□□ -1.9
CIT1YNR001C TIP20P33891 701 aa3.2□□□□□ -1.9
CIT1YNR001C PMU1P36069 295 aa3.2□□□□□ -1.9
CIT1YNR001C PAU24P38155 120 aa3.2□□□□□ -1.9
CIT1YNR001C YBR292CP38357 123 aa3.2□□□□□ -1.9
CIT1YNR001C MPM1P40364 252 aa3.2□□□□□ -1.9
CIT1YNR001C PRM10P42946 383 aa3.2□□□□□ -1.9
CIT1YNR001C MOB2P43563 287 aa3.2□□□□□ -1.9
CIT1YNR001C CIN2P46670 268 aa3.2□□□□□ -1.9
CIT1YNR001C NCA3P46955 337 aa3.2□□□□□ -1.9
CIT1YNR001C NUP57P48837 541 aa3.2□□□□□ -1.9
CIT1YNR001C MIC26P50087 233 aa3.2□□□□□ -1.9
CIT1YNR001C YPS5P53057 165 aa3.2□□□□□ -1.9
CIT1YNR001C DOC1P53068 250 aa3.2□□□□□ -1.9
CIT1YNR001C RSM27P53305 110 aa3.2□□□□□ -1.9
CIT1YNR001C SAE3P89114 91 aa3.2□□□□□ -1.9
CIT1YNR001C RHO3Q00245 231 aaKnown RBP3.2□□□□□ -1.9
CIT1YNR001C SPG3Q04398 127 aaPredicted RBP3.2□□□□□ -1.9
CIT1YNR001C GMC1Q04399 608 aa3.2□□□□□ -1.9
CIT1YNR001C DGK1Q12382 290 aa3.2□□□□□ -1.9
CIT1YNR001C YDL085C-AQ3E7B7 68 aaKnown RBP3.2□□□□□ -1.9
CIT1YNR001C SAL1D6W196 494 aa3.19□□□□□ -1.9
CIT1YNR001C COX5AP00424 153 aa3.19□□□□□ -1.9
CIT1YNR001C STE7P06784 515 aa3.19□□□□□ -1.9
CIT1YNR001C ATP5P09457 212 aa3.19□□□□□ -1.9
CIT1YNR001C CPR1P14832 162 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C FUN14P18411 198 aa3.19□□□□□ -1.9
CIT1YNR001C CKS1P20486 150 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C AIM17P23180 465 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C PAU2P32612 120 aa3.19□□□□□ -1.9
CIT1YNR001C CAT2P32796 670 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C ATG8P38182 117 aaRIP-Chip data3.19□□□□□ -1.9not detected
CIT1YNR001C SHE1P38200 338 aa3.19□□□□□ -1.9
CIT1YNR001C HTD2P38790 280 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C SRP14P38985 146 aa3.19□□□□□ -1.9
CIT1YNR001C PEX22P39718 180 aa3.19□□□□□ -1.9
CIT1YNR001C ICE2P40499 491 aa3.19□□□□□ -1.9
CIT1YNR001C BAT2P47176 376 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C UFD1P53044 361 aa3.19□□□□□ -1.9
CIT1YNR001C MGA1P53050 456 aa3.19□□□□□ -1.9
CIT1YNR001C NRM1P53718 249 aa3.19□□□□□ -1.9
CIT1YNR001C RNY1Q02933 434 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C SNA4Q07549 140 aa3.19□□□□□ -1.9
CIT1YNR001C VMA9Q3E7B6 73 aa3.19□□□□□ -1.9
CIT1YNR001C MDN1Q12019 4910 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C MOT1P32333 1867 aa3.19□□□□□ -1.9
CIT1YNR001C COX9P07255 59 aa3.19□□□□□ -1.9
CIT1YNR001C QCR2P07257 368 aa3.19□□□□□ -1.9
CIT1YNR001C CPA1P07258 411 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C YOL163WP0CF20 169 aa3.19□□□□□ -1.9
CIT1YNR001C RPL35AP0CX84 120 aaKnown RBP3.19□□□□□ -1.9
CIT1YNR001C RPL35BP0CX85 120 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms