RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W SHE2P36068 246 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
PRE5YMR314W YBR197CP38306 217 aa5.58□□□□□ -1.52
PRE5YMR314W YJL218WP40892 196 aaKnown RBP5.58□□□□□ -1.52
PRE5YMR314W NCE103P53615 221 aa5.58□□□□□ -1.52
PRE5YMR314W RRG8Q06109 277 aa5.58□□□□□ -1.52
PRE5YMR314W PET494P07390 489 aaPredicted RBP5.57□□□□□ -1.52
PRE5YMR314W BNA6P43619 295 aa5.57□□□□□ -1.52
PRE5YMR314W YJR011CP47086 261 aaPredicted RBP5.57□□□□□ -1.52
PRE5YMR314W YFH1Q07540 174 aa5.57□□□□□ -1.52
PRE5YMR314W YPR108W-AQ3E7B3 70 aa5.57□□□□□ -1.52
PRE5YMR314W HBN1Q96VH4 193 aa5.57□□□□□ -1.52
PRE5YMR314W ODC2Q99297 307 aa5.57□□□□□ -1.52
PRE5YMR314W VPS63O13549 108 aa5.56□□□□□ -1.52
PRE5YMR314W CHO1P08456 276 aa5.56□□□□□ -1.52
PRE5YMR314W CDC23P16522 626 aa5.56□□□□□ -1.52
PRE5YMR314W DIT1P21623 536 aa5.56□□□□□ -1.52
PRE5YMR314W YHR138CP38841 114 aaPredicted RBP5.56□□□□□ -1.52
PRE5YMR314W GAT4P40569 121 aa5.56□□□□□ -1.52
PRE5YMR314W LST8P41318 303 aa5.56□□□□□ -1.52
PRE5YMR314W YNG1Q08465 219 aa5.56□□□□□ -1.52
PRE5YMR314W DCP1Q12517 231 aaPredicted RBP5.56□□□□□ -1.52
PRE5YMR314W YEL009C-AA0A023PZF2 135 aa5.55□□□□□ -1.52
PRE5YMR314W URA6P15700 204 aa5.55□□□□□ -1.52
PRE5YMR314W IMD2P38697 523 aaKnown RBP5.55□□□□□ -1.52
PRE5YMR314W ERV29P53337 310 aa5.55□□□□□ -1.52
PRE5YMR314W HRD1Q08109 551 aa5.55□□□□□ -1.52
PRE5YMR314W CDC34P14682 295 aa5.54□□□□□ -1.52
PRE5YMR314W NOP1P15646 327 aaKnown RBP5.54□□□□□ -1.52
PRE5YMR314W ATP3P38077 311 aaKnown RBP5.54□□□□□ -1.52
PRE5YMR314W YPT31P38555 223 aaKnown RBP5.54□□□□□ -1.52
PRE5YMR314W SSZ1P38788 538 aaKnown RBP5.54□□□□□ -1.52
PRE5YMR314W IRC24P40580 263 aa5.54□□□□□ -1.52
PRE5YMR314W MSS2P40990 351 aa5.54□□□□□ -1.52
PRE5YMR314W CAF16P43569 289 aa5.54□□□□□ -1.52
PRE5YMR314W TDA4P47153 279 aa5.54□□□□□ -1.52
PRE5YMR314W VMA10P48836 114 aaKnown RBP5.54□□□□□ -1.52
PRE5YMR314W FYV6P53913 173 aa5.54□□□□□ -1.52
PRE5YMR314W YMR130WQ04223 302 aa5.54□□□□□ -1.52
PRE5YMR314W ATG39Q06159 398 aa5.54□□□□□ -1.52
PRE5YMR314W TIR4Q12218 487 aaPredicted RBP5.54□□□□□ -1.52
PRE5YMR314W YAE1P47118 141 aaPredicted RBP5.53□□□□□ -1.52
PRE5YMR314W YPR013CQ12145 317 aa5.53□□□□□ -1.52
PRE5YMR314W GPM1P00950 247 aaKnown RBP5.52□□□□□ -1.53
PRE5YMR314W SEN2P16658 377 aa5.52□□□□□ -1.53
PRE5YMR314W ECM25P32525 599 aa5.52□□□□□ -1.53
PRE5YMR314W RIB7P33312 244 aa5.52□□□□□ -1.53
PRE5YMR314W AIM20P40451 204 aa5.52□□□□□ -1.53
PRE5YMR314W SIM1P40472 476 aa5.52□□□□□ -1.53
PRE5YMR314W YIL060WP40519 144 aa5.52□□□□□ -1.53
PRE5YMR314W MIC26P50087 233 aa5.52□□□□□ -1.53
PRE5YMR314W SWT21P53873 357 aaPredicted RBP5.52□□□□□ -1.53
PRE5YMR314W SOG2Q08817 791 aa5.52□□□□□ -1.53
PRE5YMR314W RAD28Q12021 506 aa5.52□□□□□ -1.53
PRE5YMR314W TAF3Q12297 353 aa5.52□□□□□ -1.53
PRE5YMR314W MED11Q99278 115 aa5.52□□□□□ -1.53
PRE5YMR314W SOD1P00445 154 aaKnown RBP5.51□□□□□ -1.53
PRE5YMR314W HIS3P06633 220 aa5.51□□□□□ -1.53
PRE5YMR314W POP2P39008 433 aa5.51□□□□□ -1.53
PRE5YMR314W RPA34P47006 233 aaPredicted RBP5.51□□□□□ -1.53
PRE5YMR314W VHT1P53241 593 aa5.51□□□□□ -1.53
PRE5YMR314W MED4Q12343 284 aa5.51□□□□□ -1.53
PRE5YMR314W HUG1Q6Q5K6 68 aa5.51□□□□□ -1.53
PRE5YMR314W CYC3P06182 269 aa5.5□□□□□ -1.53
PRE5YMR314W MSS1P32559 526 aaPredicted RBP5.5□□□□□ -1.53
PRE5YMR314W SSU72P53538 206 aaPredicted RBP5.5□□□□□ -1.53
PRE5YMR314W RBD2Q12270 262 aa5.5□□□□□ -1.53
PRE5YMR314W DOG2P38773 246 aa5.49□□□□□ -1.53
PRE5YMR314W DOG1P38774 246 aa5.49□□□□□ -1.53
PRE5YMR314W YAR068WP39564 161 aa5.49□□□□□ -1.53
PRE5YMR314W BOL3P39724 118 aa5.49□□□□□ -1.53
PRE5YMR314W RTT105P40063 208 aa5.49□□□□□ -1.53
PRE5YMR314W PDS1P40316 373 aaPredicted RBP5.49□□□□□ -1.53
PRE5YMR314W ARO8P53090 500 aaKnown RBP5.49□□□□□ -1.53
PRE5YMR314W YGR042WP53227 271 aa5.49□□□□□ -1.53
PRE5YMR314W VBA1Q04301 562 aa5.49□□□□□ -1.53
PRE5YMR314W UBA3Q99344 299 aa5.49□□□□□ -1.53
PRE5YMR314W SAL1D6W196 494 aa5.48□□□□□ -1.53
PRE5YMR314W RPS18AP0CX55 146 aaKnown RBP5.48□□□□□ -1.53
PRE5YMR314W RPS18BP0CX56 146 aaPredicted RBP5.48□□□□□ -1.53
PRE5YMR314W VMA8P32610 256 aaKnown RBP5.48□□□□□ -1.53
PRE5YMR314W POR2P40478 281 aa5.48□□□□□ -1.53
PRE5YMR314W OTU1P43558 301 aa5.48□□□□□ -1.53
PRE5YMR314W HAL1Q01766 294 aa5.48□□□□□ -1.53
PRE5YMR314W MAK3Q03503 176 aa5.48□□□□□ -1.53
PRE5YMR314W FMP42Q04991 504 aa5.48□□□□□ -1.53
PRE5YMR314W YPL225WQ08971 146 aaKnown RBP5.48□□□□□ -1.53
PRE5YMR314W AGC1Q12482 902 aa5.48□□□□□ -1.53
PRE5YMR314W UPS2P35200 230 aa5.47□□□□□ -1.53
PRE5YMR314W FMP23P38231 175 aa5.47□□□□□ -1.53
PRE5YMR314W YBR184WP38299 523 aa5.47□□□□□ -1.53
PRE5YMR314W MDJ2P42834 146 aa5.47□□□□□ -1.53
PRE5YMR314W IRC18P47056 224 aa5.47□□□□□ -1.53
PRE5YMR314W MEH1Q02205 184 aa5.47□□□□□ -1.53
PRE5YMR314W GPN3Q06543 272 aa5.47□□□□□ -1.53
PRE5YMR314W YOR352WQ08816 343 aa5.47□□□□□ -1.53
PRE5YMR314W ATG41Q12048 136 aa5.47□□□□□ -1.53
PRE5YMR314W ISU2Q12056 156 aa5.47□□□□□ -1.53
PRE5YMR314W PRE9P23638 258 aaKnown RBP5.46□□□□□ -1.54
PRE5YMR314W MIR1P23641 311 aaKnown RBP5.46□□□□□ -1.54
PRE5YMR314W TRR1P29509 319 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 84.9 ms