RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C SPO13P23624 291 aa3.03□□□□□ -1.92
SHH3YMR118C COQ3P27680 312 aa3.03□□□□□ -1.92
SHH3YMR118C DEG1P31115 442 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C ERG2P32352 222 aa3.03□□□□□ -1.92
SHH3YMR118C TCA17P32613 152 aa3.03□□□□□ -1.92
SHH3YMR118C REC114P32841 428 aa3.03□□□□□ -1.92
SHH3YMR118C MNS1P32906 549 aa3.03□□□□□ -1.92
SHH3YMR118C YEL057CP39983 233 aa3.03□□□□□ -1.92
SHH3YMR118C YNL208WP40159 199 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C YFR054CP43622 192 aa3.03□□□□□ -1.92
SHH3YMR118C COQ5P49017 307 aa3.03□□□□□ -1.92
SHH3YMR118C HSV2P50079 448 aaPredicted RBP3.03□□□□□ -1.92
SHH3YMR118C RPL9BP51401 191 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C HOL1P53389 586 aa3.03□□□□□ -1.92
SHH3YMR118C YLR179CQ06252 201 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C FRQ1Q06389 190 aa3.03□□□□□ -1.92
SHH3YMR118C IRC19Q07843 230 aa3.03□□□□□ -1.92
SHH3YMR118C YOL029CQ08187 201 aa3.03□□□□□ -1.92
SHH3YMR118C IRC13Q08630 104 aa3.03□□□□□ -1.92
SHH3YMR118C ISA2Q12425 185 aa3.03□□□□□ -1.92
SHH3YMR118C TMA7Q3E764 64 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C NAG1Q8TGN9 163 aa3.03□□□□□ -1.92
SHH3YMR118C DFR1P07807 211 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SHH3YMR118C YSF3P0C074 85 aaPredicted RBP3.02□□□□□ -1.93
SHH3YMR118C URA5P13298 226 aaKnown RBP3.02□□□□□ -1.93
SHH3YMR118C HAP3P13434 144 aa3.02□□□□□ -1.93
SHH3YMR118C PDX1P16451 410 aa3.02□□□□□ -1.93
SHH3YMR118C ERV1P27882 189 aa3.02□□□□□ -1.93
SHH3YMR118C AHT1P29589 182 aa3.02□□□□□ -1.93
SHH3YMR118C OCH1P31755 480 aa3.02□□□□□ -1.93
SHH3YMR118C SWD2P36104 329 aaPredicted RBP3.02□□□□□ -1.93
SHH3YMR118C RTC3P38804 111 aaPredicted RBP3.02□□□□□ -1.93
SHH3YMR118C YHR210CP38893 341 aa3.02□□□□□ -1.93
SHH3YMR118C YJL193WP39542 402 aa3.02□□□□□ -1.93
SHH3YMR118C MOB1P40484 314 aa3.02□□□□□ -1.93
SHH3YMR118C PDR17P53844 350 aa3.02□□□□□ -1.93
SHH3YMR118C RHO5P53879 331 aaKnown RBP3.02□□□□□ -1.93
SHH3YMR118C TDA7P53882 636 aaPredicted RBP3.02□□□□□ -1.93
SHH3YMR118C DAD3P69850 94 aa3.02□□□□□ -1.93
SHH3YMR118C YPL067CQ02754 198 aa3.02□□□□□ -1.93
SHH3YMR118C RCE1Q03530 315 aa3.02□□□□□ -1.93
SHH3YMR118C PKR1Q03880 122 aaKnown RBP3.02□□□□□ -1.93
SHH3YMR118C YHM2Q04013 314 aa3.02□□□□□ -1.93
SHH3YMR118C TVP18Q04767 167 aa3.02□□□□□ -1.93
SHH3YMR118C YDR286CQ05530 114 aa3.02□□□□□ -1.93
SHH3YMR118C YPR174CQ06616 221 aaPredicted RBP3.02□□□□□ -1.93
SHH3YMR118C MCH4Q08268 501 aa3.02□□□□□ -1.93
SHH3YMR118C REX3Q12090 404 aa3.02□□□□□ -1.93
SHH3YMR118C ERV2Q12284 196 aa3.02□□□□□ -1.93
SHH3YMR118C SWM1Q12379 170 aa3.02□□□□□ -1.93
SHH3YMR118C PAR32Q12515 295 aaKnown RBP3.02□□□□□ -1.93
SHH3YMR118C STT4P37297 1900 aa3.01□□□□□ -1.93
SHH3YMR118C FMP49A0A023PZB3 126 aa3.01□□□□□ -1.93
SHH3YMR118C MES1P00958 751 aaKnown RBP3.01□□□□□ -1.93
SHH3YMR118C CDC36P06100 191 aaPredicted RBP3.01□□□□□ -1.93
SHH3YMR118C QCR9P22289 66 aa3.01□□□□□ -1.93
SHH3YMR118C YGL010WP25338 174 aa3.01□□□□□ -1.93
SHH3YMR118C YCR025CP25352 136 aa3.01□□□□□ -1.93
SHH3YMR118C URK1P27515 501 aa3.01□□□□□ -1.93
SHH3YMR118C MIX23P38162 196 aa3.01□□□□□ -1.93
SHH3YMR118C WSC4P38739 605 aa3.01□□□□□ -1.93
SHH3YMR118C RPB11P38902 120 aa3.01□□□□□ -1.93
SHH3YMR118C POP2P39008 433 aa3.01□□□□□ -1.93
SHH3YMR118C YER010CP40011 234 aa3.01□□□□□ -1.93
SHH3YMR118C AGE2P40529 298 aa3.01□□□□□ -1.93
SHH3YMR118C SHR5P41912 237 aa3.01□□□□□ -1.93
SHH3YMR118C HIT1P46973 164 aa3.01□□□□□ -1.93
SHH3YMR118C TTI2P47168 421 aa3.01□□□□□ -1.93
SHH3YMR118C RIB4P50861 169 aaPredicted RBP3.01□□□□□ -1.93
SHH3YMR118C RPN14P53196 417 aa3.01□□□□□ -1.93
SHH3YMR118C LST7P53237 242 aa3.01□□□□□ -1.93
SHH3YMR118C YLR460CP54007 376 aa3.01□□□□□ -1.93
SHH3YMR118C HHT1P61830 136 aa3.01□□□□□ -1.93
SHH3YMR118C RUB1Q03919 77 aa3.01□□□□□ -1.93
SHH3YMR118C TSA2Q04120 196 aa3.01□□□□□ -1.93
SHH3YMR118C HRI1Q05905 244 aaKnown RBP3.01□□□□□ -1.93
SHH3YMR118C CTS2Q06350 511 aa3.01□□□□□ -1.93
SHH3YMR118C YPR147CQ06522 304 aaKnown RBP3.01□□□□□ -1.93
SHH3YMR118C STP4Q07351 490 aa3.01□□□□□ -1.93
SHH3YMR118C NAT5Q08689 176 aa3.01□□□□□ -1.93
SHH3YMR118C YPL264CQ08980 353 aa3.01□□□□□ -1.93
SHH3YMR118C YPR071WQ12346 211 aa3.01□□□□□ -1.93
SHH3YMR118C HUT1Q12520 339 aa3.01□□□□□ -1.93
SHH3YMR118C YLR365WQ7LIF2 110 aa3.01□□□□□ -1.93
SHH3YMR118C UBR1P19812 1950 aa3.01□□□□□ -1.93
SHH3YMR118C HTB1P02293 131 aaKnown RBP3□□□□□ -1.93
SHH3YMR118C HTB2P02294 131 aa3□□□□□ -1.93
SHH3YMR118C POR1P04840 283 aaKnown RBP3□□□□□ -1.93
SHH3YMR118C ARF1P11076 181 aaKnown RBP3□□□□□ -1.93
SHH3YMR118C MXR2P25566 168 aa3□□□□□ -1.93
SHH3YMR118C PEX4P29340 183 aa3□□□□□ -1.93
SHH3YMR118C DUT1P33317 147 aa3□□□□□ -1.93
SHH3YMR118C SHB17P36136 271 aaKnown RBP3□□□□□ -1.93
SHH3YMR118C DAD2P36162 133 aa3□□□□□ -1.93
SHH3YMR118C DOG1P38774 246 aa3□□□□□ -1.93
SHH3YMR118C PAC2P39937 518 aa3□□□□□ -1.93
SHH3YMR118C YND1P40009 630 aa3□□□□□ -1.93
SHH3YMR118C ATF1P40353 525 aa3□□□□□ -1.93
SHH3YMR118C YIL152WP40455 235 aa3□□□□□ -1.93
SHH3YMR118C CDC40P40968 455 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms