RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C FEX1Q08913 375 aa2.19□□□□□ -2.06
SUB1YMR039C FEX2Q08991 375 aa2.19□□□□□ -2.06
SUB1YMR039C AKR2Q12013 749 aa2.19□□□□□ -2.06
SUB1YMR039C YOR283WQ12040 230 aaKnown RBP2.19□□□□□ -2.06
SUB1YMR039C PSF1Q12488 208 aa2.19□□□□□ -2.06
SUB1YMR039C CDC8P00572 216 aa2.18□□□□□ -2.06
SUB1YMR039C YLR156WP0CE96 114 aa2.18□□□□□ -2.06
SUB1YMR039C YLR159WP0CE97 114 aa2.18□□□□□ -2.06
SUB1YMR039C YLR161WP0CE98 114 aa2.18□□□□□ -2.06
SUB1YMR039C URA5P13298 226 aaKnown RBP2.18□□□□□ -2.06
SUB1YMR039C CKS1P20486 150 aaKnown RBP2.18□□□□□ -2.06
SUB1YMR039C SEC14P24280 304 aaKnown RBP2.18□□□□□ -2.06
SUB1YMR039C RSA4P25382 515 aaKnown RBP2.18□□□□□ -2.06
SUB1YMR039C YKR041WP36134 250 aa2.18□□□□□ -2.06
SUB1YMR039C UTP30P36144 274 aaKnown RBP2.18□□□□□ -2.06
SUB1YMR039C MRPL49P40858 161 aaPredicted RBP2.18□□□□□ -2.06
SUB1YMR039C SKI6P46948 246 aaPredicted RBP2.18□□□□□ -2.06
SUB1YMR039C MIX17Q03667 156 aa2.18□□□□□ -2.06
SUB1YMR039C SUE1Q06524 206 aa2.18□□□□□ -2.06
SUB1YMR039C PET20Q99373 253 aa2.18□□□□□ -2.06
SUB1YMR039C DPM1P14020 267 aaKnown RBP2.17□□□□□ -2.06
SUB1YMR039C RPB3P16370 318 aaKnown RBP2.17□□□□□ -2.06
SUB1YMR039C PET9P18239 318 aaKnown RBP2.17□□□□□ -2.06
SUB1YMR039C MRPS28P21771 286 aa2.17□□□□□ -2.06
SUB1YMR039C NUF2P33895 451 aa2.17□□□□□ -2.06
SUB1YMR039C GIM4P40005 111 aaKnown RBP2.17□□□□□ -2.06
SUB1YMR039C YER076CP40049 302 aa2.17□□□□□ -2.06
SUB1YMR039C SOK1P40317 901 aa2.17□□□□□ -2.06
SUB1YMR039C PRM10P42946 383 aa2.17□□□□□ -2.06
SUB1YMR039C SWP1Q02795 286 aa2.17□□□□□ -2.06
SUB1YMR039C AIM34Q03673 198 aa2.17□□□□□ -2.06
SUB1YMR039C YLR053CQ12026 108 aa2.17□□□□□ -2.06
SUB1YMR039C MCP1Q12106 302 aa2.17□□□□□ -2.06
SUB1YMR039C TSC3Q3E790 80 aa2.17□□□□□ -2.06
SUB1YMR039C YPR014CQ6B0W2 109 aa2.17□□□□□ -2.06
SUB1YMR039C CMD1P06787 147 aaKnown RBP2.16□□□□□ -2.06
SUB1YMR039C KRE1P17260 313 aa2.16□□□□□ -2.06
SUB1YMR039C AHC2P25649 128 aa2.16□□□□□ -2.06
SUB1YMR039C SCM4P32564 187 aa2.16□□□□□ -2.06
SUB1YMR039C VMA11P32842 164 aa2.16□□□□□ -2.06
SUB1YMR039C SRP102P36057 244 aaPredicted RBP2.16□□□□□ -2.06
SUB1YMR039C YHL026CP38740 315 aa2.16□□□□□ -2.06
SUB1YMR039C AIM2P39721 246 aa2.16□□□□□ -2.06
SUB1YMR039C ARP3P47117 449 aaKnown RBP2.16□□□□□ -2.06
SUB1YMR039C DSK2P48510 373 aa2.16□□□□□ -2.06
SUB1YMR039C ARO8P53090 500 aaKnown RBP2.16□□□□□ -2.06
SUB1YMR039C TRM12Q04235 462 aa2.16□□□□□ -2.06
SUB1YMR039C HNT1Q04344 158 aaKnown RBP2.16□□□□□ -2.06
SUB1YMR039C SHH4Q06236 168 aa2.16□□□□□ -2.06
SUB1YMR039C NSL1Q12143 216 aa2.16□□□□□ -2.06
SUB1YMR039C YFR032C-BQ8TGU2 87 aa2.16□□□□□ -2.06
SUB1YMR039C MSW1P04803 379 aa2.15□□□□□ -2.07
SUB1YMR039C RPL26AP05743 127 aaKnown RBP2.15□□□□□ -2.07
SUB1YMR039C YHR032W-AP0C5N6 59 aa2.15□□□□□ -2.07
SUB1YMR039C YCR090CP25654 182 aaKnown RBP2.15□□□□□ -2.07
SUB1YMR039C TVP38P36164 337 aa2.15□□□□□ -2.07
SUB1YMR039C FMP23P38231 175 aa2.15□□□□□ -2.07
SUB1YMR039C CTR2P38865 189 aa2.15□□□□□ -2.07
SUB1YMR039C AIF1P52923 378 aa2.15□□□□□ -2.07
SUB1YMR039C YGL235WP53071 178 aa2.15□□□□□ -2.07
SUB1YMR039C RPL26BP53221 127 aaKnown RBP2.15□□□□□ -2.07
SUB1YMR039C YGR042WP53227 271 aa2.15□□□□□ -2.07
SUB1YMR039C PGA1P53896 198 aa2.15□□□□□ -2.07
SUB1YMR039C MAK3Q03503 176 aa2.15□□□□□ -2.07
SUB1YMR039C SPC24Q04477 213 aa2.15□□□□□ -2.07
SUB1YMR039C MPD1Q12404 318 aaKnown RBP2.15□□□□□ -2.07
SUB1YMR039C PEX11Q12462 236 aa2.15□□□□□ -2.07
SUB1YMR039C SCO1P23833 295 aa2.14□□□□□ -2.07
SUB1YMR039C OCH1P31755 480 aa2.14□□□□□ -2.07
SUB1YMR039C DER1P38307 211 aa2.14□□□□□ -2.07
SUB1YMR039C YER084WP40057 128 aa2.14□□□□□ -2.07
SUB1YMR039C SMD3P43321 101 aaKnown RBP2.14□□□□□ -2.07
SUB1YMR039C TDA4P47153 279 aa2.14□□□□□ -2.07
SUB1YMR039C VMA10P48836 114 aaKnown RBP2.14□□□□□ -2.07
SUB1YMR039C SBH2P52871 88 aa2.14□□□□□ -2.07
SUB1YMR039C YGL204CP53089 101 aa2.14□□□□□ -2.07
SUB1YMR039C CAB4P53332 305 aa2.14□□□□□ -2.07
SUB1YMR039C RGM1Q00453 211 aa2.14□□□□□ -2.07
SUB1YMR039C GPI17Q04080 534 aa2.14□□□□□ -2.07
SUB1YMR039C DGA1Q08650 418 aa2.14□□□□□ -2.07
SUB1YMR039C MHT1Q12525 324 aa2.14□□□□□ -2.07
SUB1YMR039C MRPL17P36528 281 aa2.13□□□□□ -2.07
SUB1YMR039C VMA22P38784 181 aa2.13□□□□□ -2.07
SUB1YMR039C CYC2P38909 366 aa2.13□□□□□ -2.07
SUB1YMR039C EDC3P39998 551 aaKnown RBP2.13□□□□□ -2.07
SUB1YMR039C YFH7P43591 353 aa2.13□□□□□ -2.07
SUB1YMR039C MNN5P46982 586 aa2.13□□□□□ -2.07
SUB1YMR039C PIR5P46999 287 aa2.13□□□□□ -2.07
SUB1YMR039C SNX4P47057 423 aa2.13□□□□□ -2.07
SUB1YMR039C NQM1P53228 333 aaPredicted RBP2.13□□□□□ -2.07
SUB1YMR039C DYN3Q04949 312 aa2.13□□□□□ -2.07
SUB1YMR039C NEJ1Q06148 342 aa2.13□□□□□ -2.07
SUB1YMR039C RDI1Q12434 202 aa2.13□□□□□ -2.07
SUB1YMR039C BEM2P39960 2167 aaKnown RBP2.12□□□□□ -2.07
SUB1YMR039C TIM9O74700 87 aa2.12□□□□□ -2.07
SUB1YMR039C ATP15P21306 62 aa2.12□□□□□ -2.07
SUB1YMR039C MDH3P32419 343 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SUB1YMR039C SNC2P33328 115 aa2.12□□□□□ -2.07
SUB1YMR039C YKL102CP34249 101 aa2.12□□□□□ -2.07
SUB1YMR039C UMP1P38293 148 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms