RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W PRP18P33411 251 aaPredicted RBP2.27□□□□□ -2.05
SPO20YMR017W TIR3P40552 269 aa2.27□□□□□ -2.05
SPO20YMR017W GAS3Q03655 524 aa2.27□□□□□ -2.05
SPO20YMR017W NCB2Q92317 146 aa2.27□□□□□ -2.05
SPO20YMR017W CDC33P07260 213 aaKnown RBP2.26□□□□□ -2.05
SPO20YMR017W TCA17P32613 152 aa2.26□□□□□ -2.05
SPO20YMR017W PRX1P34227 261 aaKnown RBP2.26□□□□□ -2.05
SPO20YMR017W SIP3P38717 1229 aa2.26□□□□□ -2.05
SPO20YMR017W AVT2P39981 480 aa2.26□□□□□ -2.05
SPO20YMR017W BOL2P53082 120 aa2.26□□□□□ -2.05
SPO20YMR017W TIM11P81449 96 aaPredicted RBP2.26□□□□□ -2.05
SPO20YMR017W SPP41P38904 1435 aa2.25□□□□□ -2.05
SPO20YMR017W DNF1P32660 1571 aa2.25□□□□□ -2.05
SPO20YMR017W MRPS28P21771 286 aa2.25□□□□□ -2.05
SPO20YMR017W MRPL28P36527 147 aa2.25□□□□□ -2.05
SPO20YMR017W RAD17P48581 401 aa2.25□□□□□ -2.05
SPO20YMR017W CWC23P52868 283 aaPredicted RBP2.25□□□□□ -2.05
SPO20YMR017W SML1Q04964 104 aa2.25□□□□□ -2.05
SPO20YMR017W TRM732Q03496 1420 aa2.25□□□□□ -2.05
SPO20YMR017W SPO14P36126 1683 aa2.25□□□□□ -2.05
SPO20YMR017W YDR157WA0A023PZE8 133 aa2.24□□□□□ -2.05
SPO20YMR017W RPL27BP0C2H7 136 aaKnown RBP2.24□□□□□ -2.05
SPO20YMR017W YER135CP40082 130 aa2.24□□□□□ -2.05
SPO20YMR017W BUD25P85052 153 aa2.24□□□□□ -2.05
SPO20YMR017W SWP1Q02795 286 aa2.24□□□□□ -2.05
SPO20YMR017W TSC3Q3E790 80 aa2.24□□□□□ -2.05
SPO20YMR017W YBR219CP38317 127 aa2.23□□□□□ -2.05
SPO20YMR017W YRB2P40517 327 aa2.23□□□□□ -2.05
SPO20YMR017W DOC1P53068 250 aa2.23□□□□□ -2.05
SPO20YMR017W PGA2P53903 129 aa2.23□□□□□ -2.05
SPO20YMR017W GIS3Q12418 502 aa2.23□□□□□ -2.05
SPO20YMR017W TSC11P40061 1430 aa2.23□□□□□ -2.05
SPO20YMR017W IRC20Q06554 1556 aa2.23□□□□□ -2.05
SPO20YMR017W SEC4P07560 215 aaKnown RBP2.22□□□□□ -2.05
SPO20YMR017W SEC17P32602 292 aa2.22□□□□□ -2.05
SPO20YMR017W MGM101P32787 269 aaKnown RBP2.22□□□□□ -2.05
SPO20YMR017W FZF1P32805 299 aa2.22□□□□□ -2.05
SPO20YMR017W UTP30P36144 274 aaKnown RBP2.22□□□□□ -2.05
SPO20YMR017W SKG1P36169 355 aa2.22□□□□□ -2.05
SPO20YMR017W MRPL17P36528 281 aa2.22□□□□□ -2.05
SPO20YMR017W YNL217WP40152 326 aa2.22□□□□□ -2.05
SPO20YMR017W PDR17P53844 350 aa2.22□□□□□ -2.05
SPO20YMR017W CHC1P22137 1653 aaKnown RBP2.22□□□□□ -2.05
SPO20YMR017W DOP1Q03921 1698 aa2.22□□□□□ -2.05
SPO20YMR017W GEA2P39993 1459 aaKnown RBP2.21□□□□□ -2.06
SPO20YMR017W NUP159P40477 1460 aa2.21□□□□□ -2.06
SPO20YMR017W YOL162WP0CF19 215 aa2.21□□□□□ -2.06
SPO20YMR017W GCN3P14741 305 aa2.21□□□□□ -2.06
SPO20YMR017W RMD6P39975 231 aa2.21□□□□□ -2.06
SPO20YMR017W IRC18P47056 224 aa2.21□□□□□ -2.06
SPO20YMR017W BNA7Q04066 261 aa2.21□□□□□ -2.06
SPO20YMR017W MCP1Q12106 302 aa2.21□□□□□ -2.06
SPO20YMR017W YHR214C-EQ8TGK0 99 aa2.21□□□□□ -2.06
SPO20YMR017W GDB1Q06625 1536 aa2.21□□□□□ -2.06
SPO20YMR017W TY3B-GQ99315 1547 aa2.21□□□□□ -2.06
SPO20YMR017W FLO9P39712 1322 aa2.2□□□□□ -2.06
SPO20YMR017W GEA1P47102 1408 aaPredicted RBP2.2□□□□□ -2.06
SPO20YMR017W MET5P47169 1442 aa2.2□□□□□ -2.06
SPO20YMR017W SNT2P53127 1403 aa2.2□□□□□ -2.06
SPO20YMR017W TIM9O74700 87 aa2.2□□□□□ -2.06
SPO20YMR017W YET1P35723 206 aa2.2□□□□□ -2.06
SPO20YMR017W YKR045CP36138 183 aa2.2□□□□□ -2.06
SPO20YMR017W UMP1P38293 148 aa2.2□□□□□ -2.06
SPO20YMR017W YNR077CP53758 84 aa2.2□□□□□ -2.06
SPO20YMR017W YPL162CQ12042 273 aa2.2□□□□□ -2.06
SPO20YMR017W NUP170P38181 1502 aa2.2□□□□□ -2.06
SPO20YMR017W BUD3P25558 1636 aa2.2□□□□□ -2.06
SPO20YMR017W VPS15P22219 1454 aa2.2□□□□□ -2.06
SPO20YMR017W PDR18P53756 1333 aa2.19□□□□□ -2.06
SPO20YMR017W GCN2P15442 1659 aa2.19□□□□□ -2.06
SPO20YMR017W IDH1P28834 360 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SPO20YMR017W PTM1P32857 523 aa2.19□□□□□ -2.06
SPO20YMR017W TAF14P35189 244 aa2.19□□□□□ -2.06
SPO20YMR017W YGR050CP53231 118 aa2.19□□□□□ -2.06
SPO20YMR017W ARO1P08566 1588 aaKnown RBP2.19□□□□□ -2.06
SPO20YMR017W PDR10P51533 1564 aa2.19□□□□□ -2.06
SPO20YMR017W TUS1Q06412 1307 aa2.18□□□□□ -2.06
SPO20YMR017W PDR12Q02785 1511 aa2.18□□□□□ -2.06
SPO20YMR017W SPS18P32572 300 aa2.18□□□□□ -2.06
SPO20YMR017W SNC2P33328 115 aa2.18□□□□□ -2.06
SPO20YMR017W AST2P39945 430 aaKnown RBP2.18□□□□□ -2.06
SPO20YMR017W PET191Q02772 108 aa2.18□□□□□ -2.06
SPO20YMR017W YLR162WQ06235 118 aa2.18□□□□□ -2.06
SPO20YMR017W CSI2Q08054 341 aa2.18□□□□□ -2.06
SPO20YMR017W SEC7P11075 2009 aaKnown RBP2.18□□□□□ -2.06
SPO20YMR017W CAT8P39113 1433 aa2.17□□□□□ -2.06
SPO20YMR017W KSS1P14681 368 aa2.17□□□□□ -2.06
SPO20YMR017W NTG1P31378 399 aa2.17□□□□□ -2.06
SPO20YMR017W GVP36P40531 326 aaKnown RBP2.17□□□□□ -2.06
SPO20YMR017W YDR249CQ03787 373 aa2.17□□□□□ -2.06
SPO20YMR017W YIL177CP40434 1758 aa2.17□□□□□ -2.06
SPO20YMR017W YJL225CP40889 1758 aa2.17□□□□□ -2.06
SPO20YMR017W BNI1P41832 1953 aa2.16□□□□□ -2.06
SPO20YMR017W RPB4P20433 221 aaPredicted RBP2.16□□□□□ -2.06
SPO20YMR017W YGL010WP25338 174 aa2.16□□□□□ -2.06
SPO20YMR017W IKI1P38874 309 aa2.16□□□□□ -2.06
SPO20YMR017W GAA1P39012 614 aa2.16□□□□□ -2.06
SPO20YMR017W EAF6P47128 113 aa2.16□□□□□ -2.06
SPO20YMR017W LSM7P53905 115 aaKnown RBP2.16□□□□□ -2.06
SPO20YMR017W DNF2Q12675 1612 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 227.7 ms