RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	ABP140	Q08641	628 aa	Known RBP	0.9	□□□□□ -2.27
CLU1	YMR012W	YML100W-A	Q8TGT0	57 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	GCN3	P14741	305 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	ECM31	P38122	312 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	SWD3	P38123	315 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	ARC40	P38328	384 aa	Known RBP	0.89	□□□□□ -2.27
CLU1	YMR012W	POG1	P40473	351 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	LOC1	P43586	204 aa	Predicted RBP	0.89	□□□□□ -2.27
CLU1	YMR012W	IGD1	P43598	195 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	RPE1	P46969	238 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	BRR6	P53062	197 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	RNH201	P53942	307 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	GOT1	Q03554	138 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	FEX1	Q08913	375 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	FEX2	Q08991	375 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	YPS3	Q12303	508 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	ATO3	Q12359	275 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	KIN28	P06242	306 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	RAD10	P06838	210 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	CKS1	P20486	150 aa	Known RBP	0.89	□□□□□ -2.27
CLU1	YMR012W	MDM31	P38880	579 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	PHB1	P40961	287 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	ECO1	P43605	281 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	YJL028W	P47062	111 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	UBC13	P52490	153 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	NQM1	P53228	333 aa	Predicted RBP	0.89	□□□□□ -2.27
CLU1	YMR012W	YNR066C	P53752	436 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	FYV6	P53913	173 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	MDM32	Q12171	622 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	Q0144	Q9ZZW2	109 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	HEM4	P06174	275 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	AIM29	P36154	155 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	GAA1	P39012	614 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	PDS1	P40316	373 aa	Predicted RBP	0.89	□□□□□ -2.27
CLU1	YMR012W	PAN6	P40459	309 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	CCC1	P47818	322 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	DSK2	P48510	373 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	ALG9	P53868	555 aa	Known RBP	0.89	□□□□□ -2.27
CLU1	YMR012W	SPG4	Q04438	115 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	YDL114W	Q07530	308 aa		0.89	□□□□□ -2.27
CLU1	YMR012W	RRT13	P40042	185 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	GAT4	P40569	121 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	LOH1	P47055	219 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	TOS8	P53147	276 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	MPA43	P53583	542 aa	Predicted RBP	0.88	□□□□□ -2.27
CLU1	YMR012W	YDR274C	P87283	123 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	YPL077C	Q02831	240 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	ECM33	P38248	429 aa	Known RBP	0.88	□□□□□ -2.27
CLU1	YMR012W	MED8	P38304	223 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	ECM34	P38728	170 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	BDH1	P39714	382 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	PFS2	P42841	465 aa	Known RBP	0.88	□□□□□ -2.27
CLU1	YMR012W	SNO3	P43544	222 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	BLM10	P43583	2143 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	PIR5	P46999	287 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	YDR124W	Q04608	324 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	ATG39	Q06159	398 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	YPL162C	Q12042	273 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	ERG24	P32462	438 aa	Known RBP	0.88	□□□□□ -2.27
CLU1	YMR012W	YHR122W	P38829	231 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	PHO90	P39535	881 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	NRK1	P53915	240 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	PIR1	Q03178	341 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	YLR283W	Q05867	314 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	SUE1	Q06524	206 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	MRX9	Q07349	420 aa	Known RBP	0.88	□□□□□ -2.27
CLU1	YMR012W	DGA1	Q08650	418 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	YAL067W-A	Q8TGK6	75 aa		0.88	□□□□□ -2.27
CLU1	YMR012W	DPM1	P14020	267 aa	Known RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	VAM7	P32912	316 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	YKL187C	P34231	750 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	SRP102	P36057	244 aa	Predicted RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	LCP5	P40079	357 aa	Predicted RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	MGA1	P53050	456 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	SCW4	P53334	386 aa	Known RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	CGI121	Q03705	181 aa	Known RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	FMN1	Q03778	218 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	SPG3	Q04398	127 aa	Predicted RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	ATG10	Q07879	167 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	YLR361C-A	Q3E795	98 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	YFR010W-A	P0C5N0	62 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	ACP1	P32463	125 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	APS3	P47064	194 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	VPS71	Q03433	280 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	YMR114C	Q04471	368 aa	Known RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	MGR3	Q04472	501 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	YLR446W	Q06204	433 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	LOA1	Q06508	300 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	COQ10	Q08058	207 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	MRS1	P07266	363 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	CDC23	P16522	626 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	SPT14	P32363	452 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	TRR2	P38816	342 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	PRE5	P40302	234 aa	Known RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	DIM1	P41819	318 aa	Known RBP	0.87	□□□□□ -2.27
CLU1	YMR012W	YDR476C	Q03362	224 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	SEC10	Q06245	871 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	YDL144C	Q07589	356 aa		0.87	□□□□□ -2.27
CLU1	YMR012W	RPN13	O13563	156 aa		0.86	□□□□□ -2.27
CLU1	YMR012W	YOL162W	P0CF19	215 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 68 ms