RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C GRE1Q08969 168 aa3.98□□□□□ -1.77
ATG17YLR423C MBF1O14467 151 aaKnown RBP3.97□□□□□ -1.77
ATG17YLR423C SNO1Q03144 224 aa3.97□□□□□ -1.77
ATG17YLR423C MEI4P29467 408 aa3.96□□□□□ -1.78
ATG17YLR423C PHO88P38264 188 aaPredicted RBP3.96□□□□□ -1.78
ATG17YLR423C AIM2P39721 246 aa3.96□□□□□ -1.78
ATG17YLR423C YNL184CP53876 108 aa3.96□□□□□ -1.78
ATG17YLR423C NRK1P53915 240 aa3.96□□□□□ -1.78
ATG17YLR423C DAD3P69850 94 aa3.96□□□□□ -1.78
ATG17YLR423C CGI121Q03705 181 aaKnown RBP3.96□□□□□ -1.78
ATG17YLR423C HNT1Q04344 158 aaKnown RBP3.96□□□□□ -1.78
ATG17YLR423C GRX8Q05926 109 aa3.96□□□□□ -1.78
ATG17YLR423C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
ATG17YLR423C YOR283WQ12040 230 aaKnown RBP3.96□□□□□ -1.78
ATG17YLR423C TY1B-DR4Q07793 1604 aa3.95□□□□□ -1.78
ATG17YLR423C SNF4P12904 322 aa3.95□□□□□ -1.78
ATG17YLR423C SNC2P33328 115 aa3.95□□□□□ -1.78
ATG17YLR423C POG1P40473 351 aa3.95□□□□□ -1.78
ATG17YLR423C GVP36P40531 326 aaKnown RBP3.95□□□□□ -1.78
ATG17YLR423C YKE4P40544 346 aa3.95□□□□□ -1.78
ATG17YLR423C ERG25P53045 309 aa3.95□□□□□ -1.78
ATG17YLR423C ARO80Q04052 950 aa3.95□□□□□ -1.78
ATG17YLR423C RIO1Q12196 484 aaKnown RBP3.95□□□□□ -1.78
ATG17YLR423C YDL085C-AQ3E7B7 68 aaKnown RBP3.95□□□□□ -1.78
ATG17YLR423C YIL177CP40434 1758 aa3.94□□□□□ -1.78
ATG17YLR423C YJL225CP40889 1758 aa3.94□□□□□ -1.78
ATG17YLR423C GCY1P14065 312 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
ATG17YLR423C UMP1P38293 148 aa3.94□□□□□ -1.78
ATG17YLR423C ICE2P40499 491 aa3.94□□□□□ -1.78
ATG17YLR423C EAF6P47128 113 aa3.94□□□□□ -1.78
ATG17YLR423C PET9P18239 318 aaKnown RBP3.93□□□□□ -1.78
ATG17YLR423C CNB1P25296 175 aa3.93□□□□□ -1.78
ATG17YLR423C YET1P35723 206 aa3.93□□□□□ -1.78
ATG17YLR423C DAN1P47178 298 aa3.93□□□□□ -1.78
ATG17YLR423C YDR274CP87283 123 aa3.93□□□□□ -1.78
ATG17YLR423C SCL1P21243 252 aaKnown RBP3.92□□□□□ -1.78
ATG17YLR423C ERG10P41338 398 aaKnown RBP3.92□□□□□ -1.78
ATG17YLR423C YNR062CP53748 327 aa3.92□□□□□ -1.78
ATG17YLR423C CMC2Q3E7A4 109 aa3.92□□□□□ -1.78
ATG17YLR423C ATP15P21306 62 aa3.91□□□□□ -1.78
ATG17YLR423C YCR090CP25654 182 aaKnown RBP3.91□□□□□ -1.78
ATG17YLR423C TRR1P29509 319 aaKnown RBP3.91□□□□□ -1.78
ATG17YLR423C SRP14P38985 146 aa3.91□□□□□ -1.78
ATG17YLR423C TIR3P40552 269 aa3.91□□□□□ -1.78
ATG17YLR423C UBC12P52491 188 aa3.91□□□□□ -1.78
ATG17YLR423C GIM5Q04493 163 aa3.91□□□□□ -1.78
ATG17YLR423C YLR031WQ07978 186 aa3.91□□□□□ -1.78
ATG17YLR423C DGA1Q08650 418 aa3.91□□□□□ -1.78
ATG17YLR423C VPS51P36116 164 aa3.9□□□□□ -1.79
ATG17YLR423C ARP3P47117 449 aaKnown RBP3.9□□□□□ -1.79
ATG17YLR423C ARO8P53090 500 aaKnown RBP3.9□□□□□ -1.79
ATG17YLR423C CYT2Q00873 224 aa3.9□□□□□ -1.79
ATG17YLR423C YHR022CP38763 256 aa3.89□□□□□ -1.79
ATG17YLR423C YJL027CP47063 138 aaPredicted RBP3.89□□□□□ -1.79
ATG17YLR423C DOC1P53068 250 aa3.89□□□□□ -1.79
ATG17YLR423C YIP3P53633 176 aa3.89□□□□□ -1.79
ATG17YLR423C YBR285WP38354 144 aa3.88□□□□□ -1.79
ATG17YLR423C RPS24AP0CX31 135 aaKnown RBP3.87□□□□□ -1.79
ATG17YLR423C RPS24BP0CX32 135 aaKnown RBP3.87□□□□□ -1.79
ATG17YLR423C YNL217WP40152 326 aa3.87□□□□□ -1.79
ATG17YLR423C AIM34Q03673 198 aa3.87□□□□□ -1.79
ATG17YLR423C BRX1Q08235 291 aaKnown RBP3.87□□□□□ -1.79
ATG17YLR423C YNR077CP53758 84 aa3.86□□□□□ -1.79
ATG17YLR423C RPL35AP0CX84 120 aaKnown RBP3.85□□□□□ -1.79
ATG17YLR423C RPL35BP0CX85 120 aaKnown RBP3.85□□□□□ -1.79
ATG17YLR423C OCH1P31755 480 aa3.85□□□□□ -1.79
ATG17YLR423C ECM4P36156 370 aa3.85□□□□□ -1.79
ATG17YLR423C NRG2P38082 220 aa3.85□□□□□ -1.79
ATG17YLR423C OPY1P38271 328 aa3.85□□□□□ -1.79
ATG17YLR423C AGE2P40529 298 aa3.85□□□□□ -1.79
ATG17YLR423C SKI6P46948 246 aaPredicted RBP3.85□□□□□ -1.79
ATG17YLR423C YJR111CP47148 283 aaKnown RBP3.85□□□□□ -1.79
ATG17YLR423C BOL2P53082 120 aa3.85□□□□□ -1.79
ATG17YLR423C YHR086W-AQ3E746 53 aa3.85□□□□□ -1.79
ATG17YLR423C YPR014CQ6B0W2 109 aa3.85□□□□□ -1.79
ATG17YLR423C RAS2P01120 322 aaKnown RBP3.84□□□□□ -1.79
ATG17YLR423C AVT2P39981 480 aa3.84□□□□□ -1.79
ATG17YLR423C VTC1P40046 129 aaRIP-Chip data3.84□□□□□ -1.79not detected
ATG17YLR423C SER2P42941 309 aa3.84□□□□□ -1.79
ATG17YLR423C FMP32P43557 207 aa3.84□□□□□ -1.79
ATG17YLR423C TMA22P47089 198 aaPredicted RBP3.84□□□□□ -1.79
ATG17YLR423C FSF1Q12029 327 aaKnown RBP3.84□□□□□ -1.79
ATG17YLR423C PAN3P36102 679 aaPredicted RBP3.83□□□□□ -1.8
ATG17YLR423C SVP26P38869 228 aa3.83□□□□□ -1.8
ATG17YLR423C YEA4P40004 342 aa3.83□□□□□ -1.8
ATG17YLR423C YLR460CP54007 376 aa3.83□□□□□ -1.8
ATG17YLR423C YOL014WQ08110 124 aa3.83□□□□□ -1.8
ATG17YLR423C CPA1P07258 411 aaKnown RBP3.82□□□□□ -1.8
ATG17YLR423C SEC14P24280 304 aaKnown RBP3.82□□□□□ -1.8
ATG17YLR423C MGT1P26188 188 aa3.82□□□□□ -1.8
ATG17YLR423C NUP49Q02199 472 aa3.82□□□□□ -1.8
ATG17YLR423C SHH4Q06236 168 aa3.82□□□□□ -1.8
ATG17YLR423C YML100W-AQ8TGT0 57 aa3.82□□□□□ -1.8
ATG17YLR423C ODC2Q99297 307 aa3.82□□□□□ -1.8
ATG17YLR423C MET5P47169 1442 aa3.81□□□□□ -1.8
ATG17YLR423C RME1P32338 300 aaKnown RBP3.81□□□□□ -1.8
ATG17YLR423C DSE2P38844 325 aa3.81□□□□□ -1.8
ATG17YLR423C YER076CP40049 302 aa3.81□□□□□ -1.8
ATG17YLR423C YER134CP40081 178 aa3.81□□□□□ -1.8
ATG17YLR423C DDI2P0CH63 225 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms