RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W ATP15P21306 62 aa2.22□□□□□ -2.05
YLR400WYLR400W TRX3P25372 127 aa2.22□□□□□ -2.05
YLR400WYLR400W GLE2P40066 365 aa2.22□□□□□ -2.05
YLR400WYLR400W YLR050CQ12155 161 aaKnown RBP2.22□□□□□ -2.05
YLR400WYLR400W BET1P22804 142 aa2.21□□□□□ -2.06
YLR400WYLR400W AHC2P25649 128 aa2.21□□□□□ -2.06
YLR400WYLR400W AME1P38313 324 aa2.21□□□□□ -2.06
YLR400WYLR400W YHR180WP38868 163 aa2.21□□□□□ -2.06
YLR400WYLR400W NVJ1P38881 321 aa2.21□□□□□ -2.06
YLR400WYLR400W SKI6P46948 246 aaPredicted RBP2.21□□□□□ -2.06
YLR400WYLR400W YJR111CP47148 283 aaKnown RBP2.21□□□□□ -2.06
YLR400WYLR400W ARO8P53090 500 aaKnown RBP2.21□□□□□ -2.06
YLR400WYLR400W SPG3Q04398 127 aaPredicted RBP2.21□□□□□ -2.06
YLR400WYLR400W BRX1Q08235 291 aaKnown RBP2.21□□□□□ -2.06
YLR400WYLR400W TIM9O74700 87 aa2.2□□□□□ -2.06
YLR400WYLR400W URA5P13298 226 aaKnown RBP2.2□□□□□ -2.06
YLR400WYLR400W MRPS28P21771 286 aa2.2□□□□□ -2.06
YLR400WYLR400W OCH1P31755 480 aa2.2□□□□□ -2.06
YLR400WYLR400W MRPL17P36528 281 aa2.2□□□□□ -2.06
YLR400WYLR400W YHL026CP38740 315 aa2.2□□□□□ -2.06
YLR400WYLR400W LSM4P40070 187 aaKnown RBP2.2□□□□□ -2.06
YLR400WYLR400W FMP32P43557 207 aa2.2□□□□□ -2.06
YLR400WYLR400W SNX4P47057 423 aa2.2□□□□□ -2.06
YLR400WYLR400W VPS68Q12016 184 aa2.2□□□□□ -2.06
YLR400WYLR400W MSW1P04803 379 aa2.19□□□□□ -2.06
YLR400WYLR400W MEI4P29467 408 aa2.19□□□□□ -2.06
YLR400WYLR400W VMA11P32842 164 aa2.19□□□□□ -2.06
YLR400WYLR400W SKG1P36169 355 aa2.19□□□□□ -2.06
YLR400WYLR400W MNN5P46982 586 aa2.19□□□□□ -2.06
YLR400WYLR400W YJL144WP47009 104 aa2.19□□□□□ -2.06
YLR400WYLR400W AIF1P52923 378 aa2.19□□□□□ -2.06
YLR400WYLR400W COS6P53344 381 aa2.19□□□□□ -2.06
YLR400WYLR400W PGA1P53896 198 aa2.19□□□□□ -2.06
YLR400WYLR400W HSK3P69852 69 aa2.19□□□□□ -2.06
YLR400WYLR400W NUP49Q02199 472 aa2.19□□□□□ -2.06
YLR400WYLR400W HNT1Q04344 158 aaKnown RBP2.19□□□□□ -2.06
YLR400WYLR400W NEJ1Q06148 342 aa2.19□□□□□ -2.06
YLR400WYLR400W PRM7Q12459 698 aa2.19□□□□□ -2.06
YLR400WYLR400W TSC3Q3E790 80 aa2.19□□□□□ -2.06
YLR400WYLR400W FAB1P34756 2278 aa2.19□□□□□ -2.06
YLR400WYLR400W QCR2P07257 368 aa2.18□□□□□ -2.06
YLR400WYLR400W TDA4P47153 279 aa2.18□□□□□ -2.06
YLR400WYLR400W DOC1P53068 250 aa2.18□□□□□ -2.06
YLR400WYLR400W SLM2P53955 656 aa2.18□□□□□ -2.06
YLR400WYLR400W AIM34Q03673 198 aa2.18□□□□□ -2.06
YLR400WYLR400W GPI17Q04080 534 aa2.18□□□□□ -2.06
YLR400WYLR400W YLR031WQ07978 186 aa2.18□□□□□ -2.06
YLR400WYLR400W YIL177CP40434 1758 aa2.18□□□□□ -2.06
YLR400WYLR400W YJL225CP40889 1758 aa2.18□□□□□ -2.06
YLR400WYLR400W RPS24AP0CX31 135 aaKnown RBP2.17□□□□□ -2.06
YLR400WYLR400W RPS24BP0CX32 135 aaKnown RBP2.17□□□□□ -2.06
YLR400WYLR400W YKL102CP34249 101 aa2.17□□□□□ -2.06
YLR400WYLR400W OPY1P38271 328 aa2.17□□□□□ -2.06
YLR400WYLR400W GVP36P40531 326 aaKnown RBP2.17□□□□□ -2.06
YLR400WYLR400W SER2P42941 309 aa2.17□□□□□ -2.06
YLR400WYLR400W TMA22P47089 198 aaPredicted RBP2.17□□□□□ -2.06
YLR400WYLR400W DSK2P48510 373 aa2.17□□□□□ -2.06
YLR400WYLR400W YNR062CP53748 327 aa2.17□□□□□ -2.06
YLR400WYLR400W HPT1Q04178 221 aaKnown RBP2.17□□□□□ -2.06
YLR400WYLR400W SHH4Q06236 168 aa2.17□□□□□ -2.06
YLR400WYLR400W RDS3Q06835 107 aaPredicted RBP2.17□□□□□ -2.06
YLR400WYLR400W HRT1Q08273 121 aa2.17□□□□□ -2.06
YLR400WYLR400W DGA1Q08650 418 aa2.17□□□□□ -2.06
YLR400WYLR400W NSL1Q12143 216 aa2.17□□□□□ -2.06
YLR400WYLR400W MPD1Q12404 318 aaKnown RBP2.17□□□□□ -2.06
YLR400WYLR400W CKS1P20486 150 aaKnown RBP2.16□□□□□ -2.06
YLR400WYLR400W CLB6P32943 380 aa2.16□□□□□ -2.06
YLR400WYLR400W UMP1P38293 148 aa2.16□□□□□ -2.06
YLR400WYLR400W EDC3P39998 551 aaKnown RBP2.16□□□□□ -2.06
YLR400WYLR400W YEA4P40004 342 aa2.16□□□□□ -2.06
YLR400WYLR400W PGD1P40356 397 aa2.16□□□□□ -2.06
YLR400WYLR400W NAT3Q06504 195 aa2.16□□□□□ -2.06
YLR400WYLR400W RDI1Q12434 202 aa2.16□□□□□ -2.06
YLR400WYLR400W TVP38P36164 337 aa2.15□□□□□ -2.07
YLR400WYLR400W FIG1P38224 298 aa2.15□□□□□ -2.07
YLR400WYLR400W DER1P38307 211 aa2.15□□□□□ -2.07
YLR400WYLR400W MTW1P39731 289 aa2.15□□□□□ -2.07
YLR400WYLR400W SOL1P50278 321 aa2.15□□□□□ -2.07
YLR400WYLR400W YDR274CP87283 123 aa2.15□□□□□ -2.07
YLR400WYLR400W SUE1Q06524 206 aa2.15□□□□□ -2.07
YLR400WYLR400W YLR053CQ12026 108 aa2.15□□□□□ -2.07
YLR400WYLR400W PEX11Q12462 236 aa2.15□□□□□ -2.07
YLR400WYLR400W ODC2Q99297 307 aa2.15□□□□□ -2.07
YLR400WYLR400W SEC14P24280 304 aaKnown RBP2.14□□□□□ -2.07
YLR400WYLR400W MDH3P32419 343 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
YLR400WYLR400W KDX1P36005 433 aa2.14□□□□□ -2.07
YLR400WYLR400W YGL235WP53071 178 aa2.14□□□□□ -2.07
YLR400WYLR400W YGR219WP53307 113 aa2.14□□□□□ -2.07
YLR400WYLR400W FSF1Q12029 327 aaKnown RBP2.14□□□□□ -2.07
YLR400WYLR400W ATO3Q12359 275 aa2.14□□□□□ -2.07
YLR400WYLR400W MHT1Q12525 324 aa2.14□□□□□ -2.07
YLR400WYLR400W YPR096CO13587 100 aa2.13□□□□□ -2.07
YLR400WYLR400W CMD1P06787 147 aaKnown RBP2.13□□□□□ -2.07
YLR400WYLR400W YCR023CP25351 611 aa2.13□□□□□ -2.07
YLR400WYLR400W YOR062CP36025 268 aa2.13□□□□□ -2.07
YLR400WYLR400W VTC1P40046 129 aaRIP-Chip data2.13□□□□□ -2.07not detected
YLR400WYLR400W YFL019CP43576 117 aa2.13□□□□□ -2.07
YLR400WYLR400W MPC3P53311 146 aa2.13□□□□□ -2.07
YLR400WYLR400W IGO1P53897 168 aa2.13□□□□□ -2.07
YLR400WYLR400W MRPS8Q03799 155 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms