RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W UIP4Q08926 304 aa1.65□□□□□ -2.15
VPS38YLR360W YRF1-3P0CX14 1859 aa1.64□□□□□ -2.15
VPS38YLR360W YRF1-7P0CX15 1859 aa1.64□□□□□ -2.15
VPS38YLR360W ECM29P38737 1868 aa1.64□□□□□ -2.15
VPS38YLR360W YRF1-6P53819 1859 aa1.64□□□□□ -2.15
VPS38YLR360W JIP3O13555 125 aa1.64□□□□□ -2.15
VPS38YLR360W RAS2P01120 322 aaKnown RBP1.64□□□□□ -2.15
VPS38YLR360W CMD1P06787 147 aaKnown RBP1.64□□□□□ -2.15
VPS38YLR360W YGL041W-AP0C5N3 154 aa1.64□□□□□ -2.15
VPS38YLR360W MATALPHA1P0CY06 175 aa1.64□□□□□ -2.15
VPS38YLR360W HMLALPHA1P0CY07 175 aa1.64□□□□□ -2.15
VPS38YLR360W SNA3P14359 133 aa1.64□□□□□ -2.15
VPS38YLR360W FBA1P14540 359 aaKnown RBP1.64□□□□□ -2.15
VPS38YLR360W HOM6P31116 359 aaKnown RBP1.64□□□□□ -2.15
VPS38YLR360W ERG24P32462 438 aaKnown RBP1.64□□□□□ -2.15
VPS38YLR360W CLG1P35190 452 aa1.64□□□□□ -2.15
VPS38YLR360W BIG1P38813 335 aa1.64□□□□□ -2.15
VPS38YLR360W HPM1P40481 377 aa1.64□□□□□ -2.15
VPS38YLR360W ERG10P41338 398 aaKnown RBP1.64□□□□□ -2.15
VPS38YLR360W YJR056CP47115 236 aa1.64□□□□□ -2.15
VPS38YLR360W JHD2P47156 728 aaPredicted RBP1.64□□□□□ -2.15
VPS38YLR360W GET4Q12125 312 aa1.64□□□□□ -2.15
VPS38YLR360W DGK1Q12382 290 aa1.64□□□□□ -2.15
VPS38YLR360W RPL25P04456 142 aaKnown RBP1.63□□□□□ -2.15
VPS38YLR360W NSP1P14907 823 aaKnown RBP1.63□□□□□ -2.15
VPS38YLR360W SCL1P21243 252 aaKnown RBP1.63□□□□□ -2.15
VPS38YLR360W APA2P22108 325 aa1.63□□□□□ -2.15
VPS38YLR360W CNB1P25296 175 aa1.63□□□□□ -2.15
VPS38YLR360W PEX4P29340 183 aa1.63□□□□□ -2.15
VPS38YLR360W CAF4P36130 643 aa1.63□□□□□ -2.15
VPS38YLR360W YBR096WP38256 230 aa1.63□□□□□ -2.15
VPS38YLR360W GOS1P38736 223 aa1.63□□□□□ -2.15
VPS38YLR360W YAP3P38749 330 aa1.63□□□□□ -2.15
VPS38YLR360W PEP8P40335 379 aa1.63□□□□□ -2.15
VPS38YLR360W RFC2P40348 353 aa1.63□□□□□ -2.15
VPS38YLR360W ICE2P40499 491 aa1.63□□□□□ -2.15
VPS38YLR360W CIS3P47001 227 aa1.63□□□□□ -2.15
VPS38YLR360W GLG2P47011 380 aa1.63□□□□□ -2.15
VPS38YLR360W LSM1P47017 172 aaKnown RBP1.63□□□□□ -2.15
VPS38YLR360W USE1P53146 245 aa1.63□□□□□ -2.15
VPS38YLR360W RCF2P53721 224 aa1.63□□□□□ -2.15
VPS38YLR360W PET117Q02771 107 aa1.63□□□□□ -2.15
VPS38YLR360W YDR249CQ03787 373 aa1.63□□□□□ -2.15
VPS38YLR360W MRPS8Q03799 155 aa1.63□□□□□ -2.15
VPS38YLR360W KAP95Q06142 861 aaKnown RBP1.63□□□□□ -2.15
VPS38YLR360W YOR186WQ08560 144 aa1.63□□□□□ -2.15
VPS38YLR360W YOL107WQ12239 342 aa1.63□□□□□ -2.15
VPS38YLR360W RSF2P46974 1380 aa1.62□□□□□ -2.15
VPS38YLR360W BUD3P25558 1636 aa1.62□□□□□ -2.15
VPS38YLR360W COX5AP00424 153 aa1.62□□□□□ -2.15
VPS38YLR360W PET9P18239 318 aaKnown RBP1.62□□□□□ -2.15
VPS38YLR360W PHO13P19881 312 aa1.62□□□□□ -2.15
VPS38YLR360W RNA15P25299 296 aaPredicted RBP1.62□□□□□ -2.15
VPS38YLR360W MSN4P33749 630 aa1.62□□□□□ -2.15
VPS38YLR360W TAF14P35189 244 aa1.62□□□□□ -2.15
VPS38YLR360W UTP30P36144 274 aaKnown RBP1.62□□□□□ -2.15
VPS38YLR360W VMA7P39111 118 aa1.62□□□□□ -2.15
VPS38YLR360W AIM2P39721 246 aa1.62□□□□□ -2.15
VPS38YLR360W RMR1P53060 241 aa1.62□□□□□ -2.15
VPS38YLR360W RHO3Q00245 231 aaKnown RBP1.62□□□□□ -2.15
VPS38YLR360W YDR476CQ03362 224 aa1.62□□□□□ -2.15
VPS38YLR360W NHP10Q03435 203 aa1.62□□□□□ -2.15
VPS38YLR360W RUB1Q03919 77 aa1.62□□□□□ -2.15
VPS38YLR360W RRT8Q08219 342 aa1.62□□□□□ -2.15
VPS38YLR360W YPL257WQ08974 193 aa1.62□□□□□ -2.15
VPS38YLR360W DCN1Q12395 269 aa1.62□□□□□ -2.15
VPS38YLR360W YCL001W-BQ96VH2 84 aa1.62□□□□□ -2.15
VPS38YLR360W BCK1Q01389 1478 aa1.61□□□□□ -2.15
VPS38YLR360W APC1P53886 1748 aa1.61□□□□□ -2.15
VPS38YLR360W ATG22P25568 528 aa1.61□□□□□ -2.15
VPS38YLR360W ATP7P30902 174 aa1.61□□□□□ -2.15
VPS38YLR360W GSP1P32835 219 aaKnown RBP1.61□□□□□ -2.15
VPS38YLR360W GSP2P32836 220 aaKnown RBP1.61□□□□□ -2.15
VPS38YLR360W SUI1P32911 108 aaKnown RBP1.61□□□□□ -2.15
VPS38YLR360W CTR2P38865 189 aa1.61□□□□□ -2.15
VPS38YLR360W RGI1P40043 161 aaPredicted RBP1.61□□□□□ -2.15
VPS38YLR360W PDS1P40316 373 aaPredicted RBP1.61□□□□□ -2.15
VPS38YLR360W FIS1P40515 155 aa1.61□□□□□ -2.15
VPS38YLR360W YRB2P40517 327 aa1.61□□□□□ -2.15
VPS38YLR360W CIN5P40917 295 aa1.61□□□□□ -2.15
VPS38YLR360W FMP32P43557 207 aa1.61□□□□□ -2.15
VPS38YLR360W LSM8P47093 109 aaKnown RBP1.61□□□□□ -2.15
VPS38YLR360W YJR111CP47148 283 aaKnown RBP1.61□□□□□ -2.15
VPS38YLR360W CGR1P53188 120 aa1.61□□□□□ -2.15
VPS38YLR360W GTR2P53290 341 aa1.61□□□□□ -2.15
VPS38YLR360W YGR219WP53307 113 aa1.61□□□□□ -2.15
VPS38YLR360W ARL3Q02804 198 aa1.61□□□□□ -2.15
VPS38YLR360W BNA7Q04066 261 aa1.61□□□□□ -2.15
VPS38YLR360W INM2Q05533 292 aa1.61□□□□□ -2.15
VPS38YLR360W NKP2Q06162 153 aa1.61□□□□□ -2.15
VPS38YLR360W YLR173WQ06247 608 aa1.61□□□□□ -2.15
VPS38YLR360W SDO1Q07953 250 aaKnown RBP1.61□□□□□ -2.15
VPS38YLR360W LAA1P39526 2014 aa1.61□□□□□ -2.15
VPS38YLR360W CDC36P06100 191 aaPredicted RBP1.6□□□□□ -2.15
VPS38YLR360W SPT3P06844 337 aa1.6□□□□□ -2.15
VPS38YLR360W MSF1P08425 469 aa1.6□□□□□ -2.15
VPS38YLR360W GRX2P17695 143 aaKnown RBP1.6□□□□□ -2.15
VPS38YLR360W SPT14P32363 452 aa1.6□□□□□ -2.15
VPS38YLR360W RPT5P33297 434 aaKnown RBP1.6□□□□□ -2.15
VPS38YLR360W LHP1P33399 275 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 120.5 ms