RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	BOL1	Q3E793	110 aa		2.82	□□□□□ -1.96
CDA2	YLR308W	YIL177C	P40434	1758 aa		2.82	□□□□□ -1.96
CDA2	YLR308W	YJL225C	P40889	1758 aa		2.82	□□□□□ -1.96
CDA2	YLR308W	CDC7	P06243	507 aa		2.81	□□□□□ -1.96
CDA2	YLR308W	MRS1	P07266	363 aa		2.81	□□□□□ -1.96
CDA2	YLR308W	URA5	P13298	226 aa	Known RBP	2.81	□□□□□ -1.96
CDA2	YLR308W	CLG1	P35190	452 aa		2.81	□□□□□ -1.96
CDA2	YLR308W	YKR041W	P36134	250 aa		2.81	□□□□□ -1.96
CDA2	YLR308W	ICE2	P40499	491 aa		2.81	□□□□□ -1.96
CDA2	YLR308W	MRPS8	Q03799	155 aa		2.81	□□□□□ -1.96
CDA2	YLR308W	YLR156W	P0CE96	114 aa		2.8	□□□□□ -1.96
CDA2	YLR308W	YLR159W	P0CE97	114 aa		2.8	□□□□□ -1.96
CDA2	YLR308W	YLR161W	P0CE98	114 aa		2.8	□□□□□ -1.96
CDA2	YLR308W	SNC2	P33328	115 aa		2.8	□□□□□ -1.96
CDA2	YLR308W	PHO88	P38264	188 aa	Predicted RBP	2.8	□□□□□ -1.96
CDA2	YLR308W	HMF1	P40037	129 aa	Known RBP	2.8	□□□□□ -1.96
CDA2	YLR308W	SWP1	Q02795	286 aa		2.8	□□□□□ -1.96
CDA2	YLR308W	YMR315W	Q04869	349 aa	Known RBP	2.8	□□□□□ -1.96
CDA2	YLR308W	NRG2	P38082	220 aa		2.79	□□□□□ -1.96
CDA2	YLR308W	FIG1	P38224	298 aa		2.79	□□□□□ -1.96
CDA2	YLR308W	VTC1	P40046	129 aa	RIP-Chip data	2.79	□□□□□ -1.96	not detected
CDA2	YLR308W	RPL33B	P41056	107 aa	Known RBP	2.79	□□□□□ -1.96
CDA2	YLR308W	COG5	P53951	403 aa		2.79	□□□□□ -1.96
CDA2	YLR308W	RRP17	Q04031	235 aa	Predicted RBP	2.79	□□□□□ -1.96
CDA2	YLR308W	SCL1	P21243	252 aa	Known RBP	2.78	□□□□□ -1.96
CDA2	YLR308W	BET1	P22804	142 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	TAH1	P25638	111 aa	Predicted RBP	2.78	□□□□□ -1.96
CDA2	YLR308W	ARO7	P32178	256 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	UMP1	P38293	148 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	SVP26	P38869	228 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	YER076C	P40049	302 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	UBC12	P52491	188 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	YGR050C	P53231	118 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	YNL184C	P53876	108 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	GAS3	Q03655	524 aa		2.78	□□□□□ -1.96
CDA2	YLR308W	CKS1	P20486	150 aa	Known RBP	2.77	□□□□□ -1.97
CDA2	YLR308W	YHR180W	P38868	163 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	LSM1	P47017	172 aa	Known RBP	2.77	□□□□□ -1.97
CDA2	YLR308W	AIM25	P47140	327 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	DAN1	P47178	298 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	NUP49	Q02199	472 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	YDC1	Q02896	317 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	TRM12	Q04235	462 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	YOL024W	Q08172	172 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	BRX1	Q08235	291 aa	Known RBP	2.77	□□□□□ -1.97
CDA2	YLR308W	YPL162C	Q12042	273 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	NSL1	Q12143	216 aa		2.77	□□□□□ -1.97
CDA2	YLR308W	YLR050C	Q12155	161 aa	Known RBP	2.77	□□□□□ -1.97
CDA2	YLR308W	MGT1	P26188	188 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	YET1	P35723	206 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	KDX1	P36005	433 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	DER1	P38307	211 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	PDS1	P40316	373 aa	Predicted RBP	2.76	□□□□□ -1.97
CDA2	YLR308W	TIR3	P40552	269 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	PRM10	P42946	383 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	YLR036C	Q07986	203 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	IGO2	Q9P305	131 aa		2.76	□□□□□ -1.97
CDA2	YLR308W	PET9	P18239	318 aa	Known RBP	2.75	□□□□□ -1.97
CDA2	YLR308W	SEC17	P32602	292 aa		2.75	□□□□□ -1.97
CDA2	YLR308W	YDR249C	Q03787	373 aa		2.75	□□□□□ -1.97
CDA2	YLR308W	YOL160W	Q08321	113 aa		2.75	□□□□□ -1.97
CDA2	YLR308W	YHR214C-E	Q8TGK0	99 aa		2.75	□□□□□ -1.97
CDA2	YLR308W	PET20	Q99373	253 aa		2.75	□□□□□ -1.97
CDA2	YLR308W	YCR090C	P25654	182 aa	Known RBP	2.74	□□□□□ -1.97
CDA2	YLR308W	MRPL17	P36528	281 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	YHR022C	P38763	256 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	DSE2	P38844	325 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	AIM2	P39721	246 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	EDC3	P39998	551 aa	Known RBP	2.74	□□□□□ -1.97
CDA2	YLR308W	PEP8	P40335	379 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	YGL235W	P53071	178 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	YNR062C	P53748	327 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	MCP1	Q12106	302 aa		2.74	□□□□□ -1.97
CDA2	YLR308W	RPB3	P16370	318 aa	Known RBP	2.73	□□□□□ -1.97
CDA2	YLR308W	MDH2	P22133	377 aa		2.73	□□□□□ -1.97
CDA2	YLR308W	TRX3	P25372	127 aa		2.73	□□□□□ -1.97
CDA2	YLR308W	NVJ1	P38881	321 aa		2.73	□□□□□ -1.97
CDA2	YLR308W	GLE2	P40066	365 aa		2.73	□□□□□ -1.97
CDA2	YLR308W	LSM4	P40070	187 aa	Known RBP	2.73	□□□□□ -1.97
CDA2	YLR308W	GVP36	P40531	326 aa	Known RBP	2.73	□□□□□ -1.97
CDA2	YLR308W	YLR053C	Q12026	108 aa		2.73	□□□□□ -1.97
CDA2	YLR308W	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.73	□□□□□ -1.97
CDA2	YLR308W	TIM9	O74700	87 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	SIR2	P06700	562 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	CNB1	P25296	175 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	UTP30	P36144	274 aa	Known RBP	2.72	□□□□□ -1.97
CDA2	YLR308W	FMP23	P38231	175 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	YBR285W	P38354	144 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	AYR1	P40471	297 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	YJL027C	P47063	138 aa	Predicted RBP	2.72	□□□□□ -1.97
CDA2	YLR308W	BUD25	P85052	153 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	CYT2	Q00873	224 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	RIO1	Q12196	484 aa	Known RBP	2.72	□□□□□ -1.97
CDA2	YLR308W	RDI1	Q12434	202 aa		2.72	□□□□□ -1.97
CDA2	YLR308W	SNF4	P12904	322 aa		2.71	□□□□□ -1.98
CDA2	YLR308W	AHC2	P25649	128 aa		2.71	□□□□□ -1.98
CDA2	YLR308W	UBC8	P28263	218 aa		2.71	□□□□□ -1.98
CDA2	YLR308W	SRP102	P36057	244 aa	Predicted RBP	2.71	□□□□□ -1.98
CDA2	YLR308W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
CDA2	YLR308W	YNL217W	P40152	326 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms