RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YLR156WP0CE96 114 aa1.53□□□□□ -2.16
ATG38YLR211C YLR159WP0CE97 114 aa1.53□□□□□ -2.16
ATG38YLR211C YLR161WP0CE98 114 aa1.53□□□□□ -2.16
ATG38YLR211C MGT1P26188 188 aa1.53□□□□□ -2.16
ATG38YLR211C ACP1P32463 125 aa1.53□□□□□ -2.16
ATG38YLR211C POP4P38336 279 aa1.53□□□□□ -2.16
ATG38YLR211C COS8P38723 381 aa1.53□□□□□ -2.16
ATG38YLR211C YHR125WP38831 101 aa1.53□□□□□ -2.16
ATG38YLR211C NVJ1P38881 321 aa1.53□□□□□ -2.16
ATG38YLR211C EDC3P39998 551 aaKnown RBP1.53□□□□□ -2.16
ATG38YLR211C GLE2P40066 365 aa1.53□□□□□ -2.16
ATG38YLR211C LSM4P40070 187 aaKnown RBP1.53□□□□□ -2.16
ATG38YLR211C PRM10P42946 383 aa1.53□□□□□ -2.16
ATG38YLR211C YJR111CP47148 283 aaKnown RBP1.53□□□□□ -2.16
ATG38YLR211C ARO8P53090 500 aaKnown RBP1.53□□□□□ -2.16
ATG38YLR211C AIM34Q03673 198 aa1.53□□□□□ -2.16
ATG38YLR211C YLR050CQ12155 161 aaKnown RBP1.53□□□□□ -2.16
ATG38YLR211C SNF4P12904 322 aa1.52□□□□□ -2.17
ATG38YLR211C MAG1P22134 296 aaKnown RBP1.52□□□□□ -2.17
ATG38YLR211C CNB1P25296 175 aa1.52□□□□□ -2.17
ATG38YLR211C YCR023CP25351 611 aa1.52□□□□□ -2.17
ATG38YLR211C AHC2P25649 128 aa1.52□□□□□ -2.17
ATG38YLR211C ARO7P32178 256 aa1.52□□□□□ -2.17
ATG38YLR211C SEC17P32602 292 aa1.52□□□□□ -2.17
ATG38YLR211C SKG1P36169 355 aa1.52□□□□□ -2.17
ATG38YLR211C ICE2P40499 491 aa1.52□□□□□ -2.17
ATG38YLR211C OST2P46964 130 aa1.52□□□□□ -2.17
ATG38YLR211C ARP3P47117 449 aaKnown RBP1.52□□□□□ -2.17
ATG38YLR211C YNL010WP53981 241 aaKnown RBP1.52□□□□□ -2.17
ATG38YLR211C DID2P69771 204 aa1.52□□□□□ -2.17
ATG38YLR211C SHH4Q06236 168 aa1.52□□□□□ -2.17
ATG38YLR211C DGA1Q08650 418 aa1.52□□□□□ -2.17
ATG38YLR211C EMC6Q12431 108 aa1.52□□□□□ -2.17
ATG38YLR211C YDL085C-AQ3E7B7 68 aaKnown RBP1.52□□□□□ -2.17
ATG38YLR211C YIL177CP40434 1758 aa1.52□□□□□ -2.17
ATG38YLR211C YJL225CP40889 1758 aa1.52□□□□□ -2.17
ATG38YLR211C CMD1P06787 147 aaKnown RBP1.51□□□□□ -2.17
ATG38YLR211C SEC14P24280 304 aaKnown RBP1.51□□□□□ -2.17
ATG38YLR211C VMA11P32842 164 aa1.51□□□□□ -2.17
ATG38YLR211C YOR062CP36025 268 aa1.51□□□□□ -2.17
ATG38YLR211C SRP102P36057 244 aaPredicted RBP1.51□□□□□ -2.17
ATG38YLR211C ARC15P40518 154 aaRIP-Chip data1.51□□□□□ -2.17not detected
ATG38YLR211C NQM1P53228 333 aaPredicted RBP1.51□□□□□ -2.17
ATG38YLR211C HSK3P69852 69 aa1.51□□□□□ -2.17
ATG38YLR211C NUP49Q02199 472 aa1.51□□□□□ -2.17
ATG38YLR211C YDR249CQ03787 373 aa1.51□□□□□ -2.17
ATG38YLR211C TRM12Q04235 462 aa1.51□□□□□ -2.17
ATG38YLR211C HNT1Q04344 158 aaKnown RBP1.51□□□□□ -2.17
ATG38YLR211C DYN3Q04949 312 aa1.51□□□□□ -2.17
ATG38YLR211C YPR127WQ06494 345 aa1.51□□□□□ -2.17
ATG38YLR211C YLR053CQ12026 108 aa1.51□□□□□ -2.17
ATG38YLR211C MCP1Q12106 302 aa1.51□□□□□ -2.17
ATG38YLR211C NSL1Q12143 216 aa1.51□□□□□ -2.17
ATG38YLR211C RIO1Q12196 484 aaKnown RBP1.51□□□□□ -2.17
ATG38YLR211C RDI1Q12434 202 aa1.51□□□□□ -2.17
ATG38YLR211C CDC8P00572 216 aa1.5□□□□□ -2.17
ATG38YLR211C Q0255P03881 472 aa1.5□□□□□ -2.17
ATG38YLR211C RPL9AP05738 191 aaKnown RBP1.5□□□□□ -2.17
ATG38YLR211C PET54P10834 293 aa1.5□□□□□ -2.17
ATG38YLR211C RPB3P16370 318 aaKnown RBP1.5□□□□□ -2.17
ATG38YLR211C PET9P18239 318 aaKnown RBP1.5□□□□□ -2.17
ATG38YLR211C CKS1P20486 150 aaKnown RBP1.5□□□□□ -2.17
ATG38YLR211C BET1P22804 142 aa1.5□□□□□ -2.17
ATG38YLR211C YKL102CP34249 101 aa1.5□□□□□ -2.17
ATG38YLR211C KDX1P36005 433 aa1.5□□□□□ -2.17
ATG38YLR211C CTR2P38865 189 aa1.5□□□□□ -2.17
ATG38YLR211C SOK1P40317 901 aa1.5□□□□□ -2.17
ATG38YLR211C FMP32P43557 207 aa1.5□□□□□ -2.17
ATG38YLR211C YFR054CP43622 192 aa1.5□□□□□ -2.17
ATG38YLR211C LSM1P47017 172 aaKnown RBP1.5□□□□□ -2.17
ATG38YLR211C SOL1P50278 321 aa1.5□□□□□ -2.17
ATG38YLR211C RPL9BP51401 191 aaKnown RBP1.5□□□□□ -2.17
ATG38YLR211C MPA43P53583 542 aaPredicted RBP1.5□□□□□ -2.17
ATG38YLR211C YDC1Q02896 317 aa1.5□□□□□ -2.17
ATG38YLR211C GPI17Q04080 534 aa1.5□□□□□ -2.17
ATG38YLR211C YOL014WQ08110 124 aa1.5□□□□□ -2.17
ATG38YLR211C PSF1Q12488 208 aa1.5□□□□□ -2.17
ATG38YLR211C MHT1Q12525 324 aa1.5□□□□□ -2.17
ATG38YLR211C SAS5Q99314 248 aa1.5□□□□□ -2.17
ATG38YLR211C TIM9O74700 87 aa1.49□□□□□ -2.17
ATG38YLR211C REP2P03872 296 aa1.49□□□□□ -2.17
ATG38YLR211C MDH3P32419 343 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
ATG38YLR211C CSH1P38287 376 aa1.49□□□□□ -2.17
ATG38YLR211C SLM6P38343 150 aa1.49□□□□□ -2.17
ATG38YLR211C YAP3P38749 330 aa1.49□□□□□ -2.17
ATG38YLR211C SMD3P43321 101 aaKnown RBP1.49□□□□□ -2.17
ATG38YLR211C SWP1Q02795 286 aa1.49□□□□□ -2.17
ATG38YLR211C MAK3Q03503 176 aa1.49□□□□□ -2.17
ATG38YLR211C SPG3Q04398 127 aaPredicted RBP1.49□□□□□ -2.17
ATG38YLR211C YPR202WQ08993 238 aa1.49□□□□□ -2.17
ATG38YLR211C PDR18P53756 1333 aa1.48□□□□□ -2.17
ATG38YLR211C URA5P13298 226 aaKnown RBP1.48□□□□□ -2.17
ATG38YLR211C ATP15P21306 62 aa1.48□□□□□ -2.17
ATG38YLR211C BUB2P26448 306 aaPredicted RBP1.48□□□□□ -2.17
ATG38YLR211C AIM2P39721 246 aa1.48□□□□□ -2.17
ATG38YLR211C GPI14P47088 403 aaKnown RBP1.48□□□□□ -2.17
ATG38YLR211C PGA1P53896 198 aa1.48□□□□□ -2.17
ATG38YLR211C YDR274CP87283 123 aa1.48□□□□□ -2.17
ATG38YLR211C YLR031WQ07978 186 aa1.48□□□□□ -2.17
ATG38YLR211C MPD1Q12404 318 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms