RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeastyeast

Gene UPS1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS1YLR193C CDC36P06100 191 aaPredicted RBP0.66□□□□□ -2.3
UPS1YLR193C QCR8P08525 94 aa0.66□□□□□ -2.3
UPS1YLR193C GPA2P10823 449 aa0.66□□□□□ -2.3
UPS1YLR193C RPB3P16370 318 aaKnown RBP0.66□□□□□ -2.3
UPS1YLR193C MER1P16523 270 aa0.66□□□□□ -2.3
UPS1YLR193C ATP15P21306 62 aa0.66□□□□□ -2.3
UPS1YLR193C TFC1P32367 649 aa0.66□□□□□ -2.3
UPS1YLR193C TAF14P35189 244 aa0.66□□□□□ -2.3
UPS1YLR193C TMA19P35691 167 aaKnown RBP0.66□□□□□ -2.3
UPS1YLR193C YBR209WP38311 105 aa0.66□□□□□ -2.3
UPS1YLR193C IKI1P38874 309 aa0.66□□□□□ -2.3
UPS1YLR193C ERJ5P43613 295 aaPredicted RBP0.66□□□□□ -2.3
UPS1YLR193C POP3P53833 195 aaPredicted RBP0.66□□□□□ -2.3
UPS1YLR193C LSM7P53905 115 aaKnown RBP0.66□□□□□ -2.3
UPS1YLR193C COG5P53951 403 aa0.66□□□□□ -2.3
UPS1YLR193C BNA7Q04066 261 aa0.66□□□□□ -2.3
UPS1YLR193C YOL160WQ08321 113 aa0.66□□□□□ -2.3
UPS1YLR193C YNG1Q08465 219 aa0.66□□□□□ -2.3
UPS1YLR193C ATG40Q99325 256 aa0.66□□□□□ -2.3
UPS1YLR193C SLH1P53327 1967 aaKnown RBP0.65□□□□□ -2.31
UPS1YLR193C YLR236CA0A023PZG4 107 aa0.65□□□□□ -2.31
UPS1YLR193C RPL25P04456 142 aaKnown RBP0.65□□□□□ -2.31
UPS1YLR193C SIR2P06700 562 aa0.65□□□□□ -2.31
UPS1YLR193C RFA3P26755 122 aaKnown RBP0.65□□□□□ -2.31
UPS1YLR193C SHE2P36068 246 aaKnown RBP RIP-Chip data0.65□□□□□ -2.31not detected
UPS1YLR193C YCR087C-AP37263 153 aa0.65□□□□□ -2.31
UPS1YLR193C YBR285WP38354 144 aa0.65□□□□□ -2.31
UPS1YLR193C TRM5P38793 499 aa0.65□□□□□ -2.31
UPS1YLR193C KNH1P50112 268 aa0.65□□□□□ -2.31
UPS1YLR193C MDM32Q12171 622 aa0.65□□□□□ -2.31
UPS1YLR193C HTB1P02293 131 aaKnown RBP0.64□□□□□ -2.31
UPS1YLR193C HTB2P02294 131 aa0.64□□□□□ -2.31
UPS1YLR193C RPL27AP0C2H6 136 aaKnown RBP0.64□□□□□ -2.31
UPS1YLR193C MAG1P22134 296 aaKnown RBP0.64□□□□□ -2.31
UPS1YLR193C VMA22P38784 181 aa0.64□□□□□ -2.31
UPS1YLR193C AIM25P47140 327 aa0.64□□□□□ -2.31
UPS1YLR193C CUS2P53830 285 aaPredicted RBP0.64□□□□□ -2.31
UPS1YLR193C HNT1Q04344 158 aaKnown RBP0.64□□□□□ -2.31
UPS1YLR193C YRA1Q12159 226 aaKnown RBP0.64□□□□□ -2.31
UPS1YLR193C YDL180WQ12301 547 aa0.64□□□□□ -2.31
UPS1YLR193C MATALPHA2P0CY08 210 aa0.63□□□□□ -2.31
UPS1YLR193C HMLALPHA2P0CY09 210 aa0.63□□□□□ -2.31
UPS1YLR193C SEC11P15367 167 aa0.63□□□□□ -2.31
UPS1YLR193C CBF1P17106 351 aa0.63□□□□□ -2.31
UPS1YLR193C RPB4P20433 221 aaPredicted RBP0.63□□□□□ -2.31
UPS1YLR193C CKS1P20486 150 aaKnown RBP0.63□□□□□ -2.31
UPS1YLR193C NTG1P31378 399 aa0.63□□□□□ -2.31
UPS1YLR193C KDX1P36005 433 aa0.63□□□□□ -2.31
UPS1YLR193C HMF1P40037 129 aaKnown RBP0.63□□□□□ -2.31
UPS1YLR193C YER076CP40049 302 aa0.63□□□□□ -2.31
UPS1YLR193C ERG10P41338 398 aaKnown RBP0.63□□□□□ -2.31
UPS1YLR193C MPA43P53583 542 aaPredicted RBP0.63□□□□□ -2.31
UPS1YLR193C CUE4Q04201 117 aaPredicted RBP0.63□□□□□ -2.31
UPS1YLR193C GGA1Q06336 557 aa0.63□□□□□ -2.31
UPS1YLR193C RAD28Q12021 506 aa0.63□□□□□ -2.31
UPS1YLR193C YCL012CQ8J0M4 134 aa0.63□□□□□ -2.31
UPS1YLR193C MSB2P32334 1306 aa0.63□□□□□ -2.31
UPS1YLR193C IKI3Q06706 1349 aaKnown RBP0.63□□□□□ -2.31
UPS1YLR193C VAR1P02381 398 aa0.62□□□□□ -2.31
UPS1YLR193C POR1P04840 283 aaKnown RBP0.62□□□□□ -2.31
UPS1YLR193C YKT6P36015 200 aaKnown RBP0.62□□□□□ -2.31
UPS1YLR193C TVP38P36164 337 aa0.62□□□□□ -2.31
UPS1YLR193C OPY1P38271 328 aa0.62□□□□□ -2.31
UPS1YLR193C TVP23P38962 199 aa0.62□□□□□ -2.31
UPS1YLR193C MPC3P53311 146 aa0.62□□□□□ -2.31
UPS1YLR193C UBC7Q02159 165 aa0.62□□□□□ -2.31
UPS1YLR193C YMR226CQ05016 267 aaKnown RBP0.62□□□□□ -2.31
UPS1YLR193C YNL146C-AQ3E7Z1 64 aa0.62□□□□□ -2.31
UPS1YLR193C ODC2Q99297 307 aa0.62□□□□□ -2.31
UPS1YLR193C YLR422WQ06409 1932 aa0.62□□□□□ -2.31
UPS1YLR193C MBF1O14467 151 aaKnown RBP0.61□□□□□ -2.31
UPS1YLR193C MRS1P07266 363 aa0.61□□□□□ -2.31
UPS1YLR193C SPO13P23624 291 aa0.61□□□□□ -2.31
UPS1YLR193C CNB1P25296 175 aa0.61□□□□□ -2.31
UPS1YLR193C YCR090CP25654 182 aaKnown RBP0.61□□□□□ -2.31
UPS1YLR193C OCH1P31755 480 aa0.61□□□□□ -2.31
UPS1YLR193C YEA4P40004 342 aa0.61□□□□□ -2.31
UPS1YLR193C YER034WP40022 185 aaKnown RBP0.61□□□□□ -2.31
UPS1YLR193C RIO2P40160 425 aaKnown RBP0.61□□□□□ -2.31
UPS1YLR193C RFC4P40339 323 aaKnown RBP0.61□□□□□ -2.31
UPS1YLR193C GET1P53192 235 aa0.61□□□□□ -2.31
UPS1YLR193C NOP19P53317 196 aaPredicted RBP0.61□□□□□ -2.31
UPS1YLR193C CWC21Q03375 135 aaKnown RBP0.61□□□□□ -2.31
UPS1YLR193C YHR007C-AQ07074 71 aa0.61□□□□□ -2.31
UPS1YLR193C DGA1Q08650 418 aa0.61□□□□□ -2.31
UPS1YLR193C QCR7P00128 127 aa0.6□□□□□ -2.31
UPS1YLR193C ASF2P32448 525 aaPredicted RBP0.6□□□□□ -2.31
UPS1YLR193C PAN3P36102 679 aaPredicted RBP0.6□□□□□ -2.31
UPS1YLR193C YPL073CP40323 161 aa0.6□□□□□ -2.31
UPS1YLR193C FLX1P40464 311 aa0.6□□□□□ -2.31
UPS1YLR193C SER2P42941 309 aa0.6□□□□□ -2.31
UPS1YLR193C ARP3P47117 449 aaKnown RBP0.6□□□□□ -2.31
UPS1YLR193C MMS2P53152 137 aa0.6□□□□□ -2.31
UPS1YLR193C YMR099CQ03161 297 aaKnown RBP0.6□□□□□ -2.31
UPS1YLR193C MRPS17Q03246 237 aaPredicted RBP0.6□□□□□ -2.31
UPS1YLR193C FUS2Q05670 677 aa0.6□□□□□ -2.31
UPS1YLR193C ABP140Q08641 628 aaKnown RBP0.6□□□□□ -2.31
UPS1YLR193C ADF1Q2V2Q1 113 aa0.6□□□□□ -2.31
UPS1YLR193C MDM35O60200 86 aa0.59□□□□□ -2.31
UPS1YLR193C AQY2P0CD90 149 aa0.59□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms