RNA–Protein interactions for RNA: YLR171W

YLR171W, Transcript of Dubious open reading frame, yeast

Gene YLR171W, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR171W	YLR171W	FAS1	P07149	2051 aa	Known RBP	0.23	□□□□□ -2.37
YLR171W	YLR171W	CDC36	P06100	191 aa	Predicted RBP	0.22	□□□□□ -2.37
YLR171W	YLR171W	RPB3	P16370	318 aa	Known RBP	0.22	□□□□□ -2.37
YLR171W	YLR171W	UGX2	P32772	223 aa		0.22	□□□□□ -2.37
YLR171W	YLR171W	PTM1	P32857	523 aa		0.22	□□□□□ -2.37
YLR171W	YLR171W	AST2	P39945	430 aa	Known RBP	0.22	□□□□□ -2.37
YLR171W	YLR171W	RMD6	P39975	231 aa		0.22	□□□□□ -2.37
YLR171W	YLR171W	RPC17	P47076	161 aa		0.22	□□□□□ -2.37
YLR171W	YLR171W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
YLR171W	YLR171W	MED4	Q12343	284 aa		0.22	□□□□□ -2.37
YLR171W	YLR171W	COA3	Q3E7B2	85 aa		0.22	□□□□□ -2.37
YLR171W	YLR171W	MATALPHA1	P0CY06	175 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	HMLALPHA1	P0CY07	175 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	SPO13	P23624	291 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	FMC1	P40491	155 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	YGR050C	P53231	118 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	MPC3	P53311	146 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	RRN5	Q02983	363 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	YHR214C-E	Q8TGK0	99 aa		0.21	□□□□□ -2.38
YLR171W	YLR171W	SSO1	P32867	290 aa		0.2	□□□□□ -2.38
YLR171W	YLR171W	HPA3	P39979	161 aa		0.2	□□□□□ -2.38
YLR171W	YLR171W	MIC26	P50087	233 aa		0.2	□□□□□ -2.38
YLR171W	YLR171W	YCR016W	P25617	290 aa	Known RBP	0.19	□□□□□ -2.38
YLR171W	YLR171W	ECM4	P36156	370 aa		0.19	□□□□□ -2.38
YLR171W	YLR171W	COX15	P40086	486 aa		0.19	□□□□□ -2.38
YLR171W	YLR171W	YLR283W	Q05867	314 aa		0.19	□□□□□ -2.38
YLR171W	YLR171W	DGA1	Q08650	418 aa		0.19	□□□□□ -2.38
YLR171W	YLR171W	POR1	P04840	283 aa	Known RBP	0.18	□□□□□ -2.38
YLR171W	YLR171W	PRX1	P34227	261 aa	Known RBP	0.18	□□□□□ -2.38
YLR171W	YLR171W	YHL018W	P38744	120 aa	Predicted RBP	0.18	□□□□□ -2.38
YLR171W	YLR171W	PET117	Q02771	107 aa		0.18	□□□□□ -2.38
YLR171W	YLR171W	UBC8	P28263	218 aa		0.17	□□□□□ -2.38
YLR171W	YLR171W	RPB7	P34087	171 aa		0.17	□□□□□ -2.38
YLR171W	YLR171W	UBC12	P52491	188 aa		0.17	□□□□□ -2.38
YLR171W	YLR171W	DAD4	P69851	72 aa		0.17	□□□□□ -2.38
YLR171W	YLR171W	FIT2	Q08906	153 aa		0.17	□□□□□ -2.38
YLR171W	YLR171W	CFT1	Q06632	1357 aa	Known RBP	0.17	□□□□□ -2.38
YLR171W	YLR171W	FMP49	A0A023PZB3	126 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	SEC4	P07560	215 aa	Known RBP	0.16	□□□□□ -2.38
YLR171W	YLR171W	CKS1	P20486	150 aa	Known RBP	0.16	□□□□□ -2.38
YLR171W	YLR171W	MSN4	P33749	630 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	MRPL15	P36523	253 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	AIM25	P47140	327 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	PET191	Q02772	108 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	YDR391C	Q04170	232 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	ODC2	Q99297	307 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	YIL177C	P40434	1758 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	YJL225C	P40889	1758 aa		0.16	□□□□□ -2.38
YLR171W	YLR171W	RPL28	P02406	149 aa	Known RBP	0.15	□□□□□ -2.39
YLR171W	YLR171W	COX8	P04039	78 aa		0.15	□□□□□ -2.39
YLR171W	YLR171W	YMR31	P19955	123 aa		0.15	□□□□□ -2.39
YLR171W	YLR171W	MAG1	P22134	296 aa	Known RBP	0.15	□□□□□ -2.39
YLR171W	YLR171W	UPS3	Q04006	179 aa		0.15	□□□□□ -2.39
YLR171W	YLR171W	YPR203W	Q08994	102 aa		0.15	□□□□□ -2.39
YLR171W	YLR171W	IKI3	Q06706	1349 aa	Known RBP	0.14	□□□□□ -2.39
YLR171W	YLR171W	RHO1	P06780	209 aa	Known RBP	0.14	□□□□□ -2.39
YLR171W	YLR171W	GCN3	P14741	305 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	YBR242W	P38331	238 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	MIC12	P38341	106 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	YIL102C	P40488	101 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	GET1	P53192	235 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	COG5	P53951	403 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	BNA7	Q04066	261 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	YMR226C	Q05016	267 aa	Known RBP	0.14	□□□□□ -2.39
YLR171W	YLR171W	RNH202	Q05635	350 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	PRP11	Q07350	266 aa	Predicted RBP	0.14	□□□□□ -2.39
YLR171W	YLR171W	YNG1	Q08465	219 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	SEY1	Q99287	776 aa		0.14	□□□□□ -2.39
YLR171W	YLR171W	THP2	O13539	261 aa	Known RBP	0.13	□□□□□ -2.39
YLR171W	YLR171W	PHO85	P17157	305 aa		0.13	□□□□□ -2.39
YLR171W	YLR171W	ALB1	P47019	175 aa	Predicted RBP	0.13	□□□□□ -2.39
YLR171W	YLR171W	LSM7	P53905	115 aa	Known RBP	0.13	□□□□□ -2.39
YLR171W	YLR171W	HNT1	Q04344	158 aa	Known RBP	0.13	□□□□□ -2.39
YLR171W	YLR171W	IRC23	Q08416	157 aa		0.13	□□□□□ -2.39
YLR171W	YLR171W	YPR013C	Q12145	317 aa		0.13	□□□□□ -2.39
YLR171W	YLR171W	RPL25	P04456	142 aa	Known RBP	0.12	□□□□□ -2.39
YLR171W	YLR171W	SEN2	P16658	377 aa		0.12	□□□□□ -2.39
YLR171W	YLR171W	OCH1	P31755	480 aa		0.12	□□□□□ -2.39
YLR171W	YLR171W	VMA6	P32366	345 aa	Known RBP	0.12	□□□□□ -2.39
YLR171W	YLR171W	PAN3	P36102	679 aa	Predicted RBP	0.12	□□□□□ -2.39
YLR171W	YLR171W	YHL037C	P38733	133 aa		0.12	□□□□□ -2.39
YLR171W	YLR171W	THG1	P53215	237 aa	Known RBP	0.12	□□□□□ -2.39
YLR171W	YLR171W	NOP19	P53317	196 aa	Predicted RBP	0.12	□□□□□ -2.39
YLR171W	YLR171W	MET31	Q03081	177 aa		0.12	□□□□□ -2.39
YLR171W	YLR171W	DYN3	Q04949	312 aa		0.12	□□□□□ -2.39
YLR171W	YLR171W	CCW12	Q12127	133 aa		0.12	□□□□□ -2.39
YLR171W	YLR171W	YPK2	P18961	677 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	RPL24B	P24000	155 aa	Known RBP	0.11	□□□□□ -2.39
YLR171W	YLR171W	YCR090C	P25654	182 aa	Known RBP	0.11	□□□□□ -2.39
YLR171W	YLR171W	AHT1	P29589	182 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	ARO7	P32178	256 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	SFK1	P35735	353 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	HMF1	P40037	129 aa	Known RBP	0.11	□□□□□ -2.39
YLR171W	YLR171W	ERG10	P41338	398 aa	Known RBP	0.11	□□□□□ -2.39
YLR171W	YLR171W	DCV1	P43595	202 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	IRC18	P47056	224 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	PDR17	P53844	350 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	YMR295C	Q03559	197 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	FYV12	Q08559	129 aa		0.11	□□□□□ -2.39
YLR171W	YLR171W	ABP140	Q08641	628 aa	Known RBP	0.11	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms