RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C DDI2P0CH63 225 aa5.06□□□□□ -1.6
SSK1YLR006C DDI3P0CH64 225 aa5.06□□□□□ -1.6
SSK1YLR006C SEC22P22214 214 aa5.06□□□□□ -1.6
SSK1YLR006C OCH1P31755 480 aa5.06□□□□□ -1.6
SSK1YLR006C MRPS5P33759 307 aa5.06□□□□□ -1.6
SSK1YLR006C PAN3P36102 679 aaPredicted RBP5.06□□□□□ -1.6
SSK1YLR006C FRM2P37261 193 aa5.06□□□□□ -1.6
SSK1YLR006C CHS7P38843 316 aa5.06□□□□□ -1.6
SSK1YLR006C LYS1P38998 373 aaRIP-Chip data5.06□□□□□ -1.6not detected
SSK1YLR006C MBB1P39534 108 aa5.06□□□□□ -1.6
SSK1YLR006C YIL108WP40483 696 aaKnown RBP5.06□□□□□ -1.6
SSK1YLR006C RPA43P46669 326 aa5.06□□□□□ -1.6
SSK1YLR006C HSK3P69852 69 aa5.06□□□□□ -1.6
SSK1YLR006C HRD1Q08109 551 aa5.06□□□□□ -1.6
SSK1YLR006C THI72Q08579 599 aa5.06□□□□□ -1.6
SSK1YLR006C SCP1Q08873 200 aa5.06□□□□□ -1.6
SSK1YLR006C ODC2Q99297 307 aa5.06□□□□□ -1.6
SSK1YLR006C FPR1P20081 114 aaKnown RBP5.06□□□□□ -1.6
SSK1YLR006C NUP1P20676 1076 aa5.06□□□□□ -1.6
SSK1YLR006C MIR1P23641 311 aaKnown RBP5.06□□□□□ -1.6
SSK1YLR006C GAR1P28007 205 aaKnown RBP5.06□□□□□ -1.6
SSK1YLR006C TRS20P38334 175 aa5.06□□□□□ -1.6
SSK1YLR006C ANS1P38832 159 aa5.06□□□□□ -1.6
SSK1YLR006C GCV3P39726 170 aaPredicted RBP5.06□□□□□ -1.6
SSK1YLR006C OST3P48439 350 aa5.06□□□□□ -1.6
SSK1YLR006C COQ5P49017 307 aa5.06□□□□□ -1.6
SSK1YLR006C PHO23P50947 330 aa5.06□□□□□ -1.6
SSK1YLR006C BOR1P53838 576 aa5.06□□□□□ -1.6
SSK1YLR006C PBP4Q07362 185 aaKnown RBP5.06□□□□□ -1.6
SSK1YLR006C HRT1Q08273 121 aa5.06□□□□□ -1.6
SSK1YLR006C YBR255C-AQ3E776 120 aa5.06□□□□□ -1.6
SSK1YLR006C PCC1Q3E833 88 aa5.06□□□□□ -1.6
SSK1YLR006C FMP46P36141 133 aaKnown RBP5.05□□□□□ -1.6
SSK1YLR006C SDS24P38314 527 aa5.05□□□□□ -1.6
SSK1YLR006C YAL037WP39728 267 aa5.05□□□□□ -1.6
SSK1YLR006C LSM8P47093 109 aaKnown RBP5.05□□□□□ -1.6
SSK1YLR006C YGR026WP53217 278 aa5.05□□□□□ -1.6
SSK1YLR006C NUP53Q03790 475 aa5.05□□□□□ -1.6
SSK1YLR006C YDR344CQ05510 147 aa5.05□□□□□ -1.6
SSK1YLR006C SLO1Q3E784 85 aa5.05□□□□□ -1.6
SSK1YLR006C MEX67Q99257 599 aaKnown RBP5.05□□□□□ -1.6
SSK1YLR006C TOA2P32774 122 aa5.05□□□□□ -1.6
SSK1YLR006C EMP24P32803 203 aaKnown RBP5.05□□□□□ -1.6
SSK1YLR006C YHL044WP38727 235 aa5.05□□□□□ -1.6
SSK1YLR006C RFC2P40348 353 aa5.05□□□□□ -1.6
SSK1YLR006C YIL060WP40519 144 aa5.05□□□□□ -1.6
SSK1YLR006C MSY1P48527 492 aa5.05□□□□□ -1.6
SSK1YLR006C YPL113CQ02961 396 aa5.05□□□□□ -1.6
SSK1YLR006C GMC1Q04399 608 aa5.05□□□□□ -1.6
SSK1YLR006C BNA5Q05979 453 aa5.05□□□□□ -1.6
SSK1YLR006C VMA9Q3E7B6 73 aa5.05□□□□□ -1.6
SSK1YLR006C RPS14AP06367 137 aaKnown RBP5.04□□□□□ -1.6
SSK1YLR006C GAS1P22146 559 aaKnown RBP5.04□□□□□ -1.6
SSK1YLR006C TIR2P33890 251 aa5.04□□□□□ -1.6
SSK1YLR006C RPP1P38786 293 aa5.04□□□□□ -1.6
SSK1YLR006C RPS14BP39516 138 aaKnown RBP5.04□□□□□ -1.6
SSK1YLR006C SOL1P50278 321 aa5.04□□□□□ -1.6
SSK1YLR006C ODC1Q03028 310 aa5.04□□□□□ -1.6
SSK1YLR006C PKR1Q03880 122 aaKnown RBP5.04□□□□□ -1.6
SSK1YLR006C MRX8Q05473 314 aa5.04□□□□□ -1.6
SSK1YLR006C RPS13P05756 151 aaKnown RBP5.03□□□□□ -1.6
SSK1YLR006C CYC3P06182 269 aa5.03□□□□□ -1.6
SSK1YLR006C SGA1P08019 549 aa5.03□□□□□ -1.6
SSK1YLR006C RPL20AP0CX23 172 aaKnown RBP5.03□□□□□ -1.6
SSK1YLR006C RPL20BP0CX24 172 aaPredicted RBP5.03□□□□□ -1.6
SSK1YLR006C POF1P25576 258 aa5.03□□□□□ -1.6
SSK1YLR006C YKL075CP36083 450 aa5.03□□□□□ -1.6
SSK1YLR006C GET2P40056 285 aa5.03□□□□□ -1.6
SSK1YLR006C YIR035CP40579 254 aa5.03□□□□□ -1.6
SSK1YLR006C ERJ5P43613 295 aaPredicted RBP5.03□□□□□ -1.6
SSK1YLR006C BRR6P53062 197 aa5.03□□□□□ -1.6
SSK1YLR006C TDA7P53882 636 aaPredicted RBP5.03□□□□□ -1.6
SSK1YLR006C HPF1Q05164 967 aa5.03□□□□□ -1.6
SSK1YLR006C YOL073CQ08232 322 aa5.03□□□□□ -1.6
SSK1YLR006C ENB1Q08299 606 aa5.03□□□□□ -1.6
SSK1YLR006C YOR385WQ08909 290 aa5.03□□□□□ -1.6
SSK1YLR006C RKI1Q12189 258 aa5.03□□□□□ -1.6
SSK1YLR006C UTP23Q12339 254 aaKnown RBP5.03□□□□□ -1.6
SSK1YLR006C ORT1Q12375 292 aa5.03□□□□□ -1.6
SSK1YLR006C TFC7Q12415 435 aa5.03□□□□□ -1.6
SSK1YLR006C RPL28P02406 149 aaKnown RBP5.03□□□□□ -1.6
SSK1YLR006C VMA5P31412 392 aaKnown RBP5.03□□□□□ -1.6
SSK1YLR006C COQ2P32378 372 aa5.03□□□□□ -1.6
SSK1YLR006C YKL097CP34245 136 aa5.03□□□□□ -1.6
SSK1YLR006C ASP1P38986 381 aaPredicted RBP5.03□□□□□ -1.6
SSK1YLR006C UBP8P50102 471 aa5.03□□□□□ -1.6
SSK1YLR006C MTM1P53320 366 aa5.03□□□□□ -1.6
SSK1YLR006C YLR152CP54072 576 aa5.03□□□□□ -1.6
SSK1YLR006C CTR3Q06686 241 aa5.03□□□□□ -1.6
SSK1YLR006C SRL2Q12020 392 aa5.03□□□□□ -1.6
SSK1YLR006C FSF1Q12029 327 aaKnown RBP5.03□□□□□ -1.6
SSK1YLR006C FCF2Q12035 217 aaPredicted RBP5.03□□□□□ -1.6
SSK1YLR006C YIR021W-AQ3E739 70 aa5.03□□□□□ -1.6
SSK1YLR006C PPH21P23594 369 aa5.02□□□□□ -1.61
SSK1YLR006C SYS1P41544 203 aa5.02□□□□□ -1.61
SSK1YLR006C BXI1P48558 297 aa5.02□□□□□ -1.61
SSK1YLR006C YIP4P53093 235 aa5.02□□□□□ -1.61
SSK1YLR006C SUR7P54003 302 aa5.02□□□□□ -1.61
SSK1YLR006C HEM25Q07534 307 aa5.02□□□□□ -1.61
SSK1YLR006C RRT7Q07829 113 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms