RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C FEN2P25621 512 aaKnown RBP9.41□□□□□ -0.9
YKR040CYKR040C MRPL3P36516 390 aa9.41□□□□□ -0.9
YKR040CYKR040C YHR138CP38841 114 aaPredicted RBP9.41□□□□□ -0.9
YKR040CYKR040C TIF11P38912 153 aaKnown RBP9.41□□□□□ -0.9
YKR040CYKR040C ARO8P53090 500 aaKnown RBP9.41□□□□□ -0.9
YKR040CYKR040C YER190C-BP0CX94 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YEL077W-AP0CX95 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YGR296C-BP0CX96 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YPL283W-BP0CX97 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YPR204C-AP0CX98 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YFL068WP0CX99 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YLL066W-AP0CY00 160 aa9.4□□□□□ -0.9
YKR040CYKR040C YLL067W-AP0CY01 160 aa9.4□□□□□ -0.9
YKR040CYKR040C NHP6BP11633 99 aaKnown RBP9.4□□□□□ -0.9
YKR040CYKR040C YNK1P36010 153 aaKnown RBP9.4□□□□□ -0.9
YKR040CYKR040C IRC24P40580 263 aa9.4□□□□□ -0.9
YKR040CYKR040C TAX4P47030 604 aa9.4□□□□□ -0.9
YKR040CYKR040C YOL029CQ08187 201 aa9.4□□□□□ -0.9
YKR040CYKR040C AEP3Q12089 606 aa9.4□□□□□ -0.9
YKR040CYKR040C BOL1Q3E793 110 aa9.4□□□□□ -0.9
YKR040CYKR040C PRY2P36110 329 aa9.39□□□□□ -0.91
YKR040CYKR040C YBR242WP38331 238 aa9.39□□□□□ -0.91
YKR040CYKR040C ENV7Q12003 364 aa9.39□□□□□ -0.91
YKR040CYKR040C TRM13Q12383 476 aa9.39□□□□□ -0.91
YKR040CYKR040C YCR016WP25617 290 aaKnown RBP9.38□□□□□ -0.91
YKR040CYKR040C MRPL13Q02204 264 aa9.38□□□□□ -0.91
YKR040CYKR040C YDL086WQ07505 273 aa9.38□□□□□ -0.91
YKR040CYKR040C YGR035W-AQ45U48 73 aa9.38□□□□□ -0.91
YKR040CYKR040C QCR2P07257 368 aa9.37□□□□□ -0.91
YKR040CYKR040C ICS2P38284 255 aa9.37□□□□□ -0.91
YKR040CYKR040C UBP8P50102 471 aa9.37□□□□□ -0.91
YKR040CYKR040C SPG4Q04438 115 aa9.37□□□□□ -0.91
YKR040CYKR040C MCH1Q07376 486 aa9.37□□□□□ -0.91
YKR040CYKR040C VPS63O13549 108 aa9.36□□□□□ -0.91
YKR040CYKR040C NIF3P53081 288 aa9.36□□□□□ -0.91
YKR040CYKR040C PAM18Q07914 168 aa9.36□□□□□ -0.91
YKR040CYKR040C HBN1Q96VH4 193 aa9.36□□□□□ -0.91
YKR040CYKR040C MRP17P28778 131 aa9.35□□□□□ -0.91
YKR040CYKR040C FEX2Q08991 375 aa9.35□□□□□ -0.91
YKR040CYKR040C HTB1P02293 131 aaKnown RBP9.34□□□□□ -0.91
YKR040CYKR040C PRS4P38063 326 aaPredicted RBP9.34□□□□□ -0.91
YKR040CYKR040C LSM12P38828 187 aaKnown RBP9.34□□□□□ -0.91
YKR040CYKR040C INO2P26798 304 aa9.33□□□□□ -0.92
YKR040CYKR040C SUA5P32579 426 aa9.33□□□□□ -0.92
YKR040CYKR040C NPL6P32832 435 aa9.33□□□□□ -0.92
YKR040CYKR040C YKR045CP36138 183 aa9.33□□□□□ -0.92
YKR040CYKR040C ERV15P38312 142 aa9.33□□□□□ -0.92
YKR040CYKR040C BFR1P38934 470 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
YKR040CYKR040C WWM1P43582 211 aaKnown RBP9.33□□□□□ -0.92
YKR040CYKR040C NDE2Q07500 545 aa9.33□□□□□ -0.92
YKR040CYKR040C ATG31Q12421 196 aa9.33□□□□□ -0.92
YKR040CYKR040C TFB5Q3E7C1 72 aaPredicted RBP9.33□□□□□ -0.92
YKR040CYKR040C NOP1P15646 327 aaKnown RBP9.32□□□□□ -0.92
YKR040CYKR040C PHM8P40025 321 aa9.32□□□□□ -0.92
YKR040CYKR040C AGE2P40529 298 aa9.32□□□□□ -0.92
YKR040CYKR040C MRPS16Q02608 121 aa9.32□□□□□ -0.92
YKR040CYKR040C FSH2Q05015 223 aa9.32□□□□□ -0.92
YKR040CYKR040C FEX1Q08913 375 aa9.32□□□□□ -0.92
YKR040CYKR040C YCT1Q12235 531 aa9.32□□□□□ -0.92
YKR040CYKR040C PRM4Q12498 284 aa9.32□□□□□ -0.92
YKR040CYKR040C ILV5P06168 395 aaKnown RBP9.31□□□□□ -0.92
YKR040CYKR040C GEP4P38812 185 aa9.31□□□□□ -0.92
YKR040CYKR040C ARP3P47117 449 aaKnown RBP9.31□□□□□ -0.92
YKR040CYKR040C CRH1P53301 507 aa9.31□□□□□ -0.92
YKR040CYKR040C VPS28Q02767 242 aa9.31□□□□□ -0.92
YKR040CYKR040C YNG1Q08465 219 aa9.31□□□□□ -0.92
YKR040CYKR040C ATG5Q12380 294 aa9.31□□□□□ -0.92
YKR040CYKR040C YJR112W-AQ3E743 109 aa9.31□□□□□ -0.92
YKR040CYKR040C YBR255C-AQ3E776 120 aa9.31□□□□□ -0.92
YKR040CYKR040C TPI1P00942 248 aaKnown RBP9.3□□□□□ -0.92
YKR040CYKR040C ARG80P07249 177 aa9.3□□□□□ -0.92
YKR040CYKR040C YKL075CP36083 450 aa9.3□□□□□ -0.92
YKR040CYKR040C ATP3P38077 311 aaKnown RBP9.3□□□□□ -0.92
YKR040CYKR040C GPP2P40106 250 aaKnown RBP9.3□□□□□ -0.92
YKR040CYKR040C YJL213WP40896 331 aa9.3□□□□□ -0.92
YKR040CYKR040C YJL163CP46996 555 aa9.3□□□□□ -0.92
YKR040CYKR040C YJR012CP47087 207 aa9.3□□□□□ -0.92
YKR040CYKR040C PUT1P09368 476 aa9.29□□□□□ -0.92
YKR040CYKR040C YGR210CP42942 411 aa9.29□□□□□ -0.92
YKR040CYKR040C FIP1P45976 327 aa9.29□□□□□ -0.92
YKR040CYKR040C VPS55P47111 140 aa9.29□□□□□ -0.92
YKR040CYKR040C RFC2P40348 353 aa9.28□□□□□ -0.92
YKR040CYKR040C HOR7Q05827 59 aa9.28□□□□□ -0.92
YKR040CYKR040C YPC1P38298 316 aa9.27□□□□□ -0.93
YKR040CYKR040C YIR035CP40579 254 aa9.27□□□□□ -0.93
YKR040CYKR040C HED1Q03937 162 aa9.27□□□□□ -0.93
YKR040CYKR040C YBR184WP38299 523 aa9.26□□□□□ -0.93
YKR040CYKR040C MRPL23Q12487 163 aaPredicted RBP9.26□□□□□ -0.93
YKR040CYKR040C YGL258W-AQ3E740 77 aa9.26□□□□□ -0.93
YKR040CYKR040C RPD3P32561 433 aa9.25□□□□□ -0.93
YKR040CYKR040C MRPL38P35996 138 aaPredicted RBP9.25□□□□□ -0.93
YKR040CYKR040C LST8P41318 303 aa9.25□□□□□ -0.93
YKR040CYKR040C RPA14P50106 137 aa9.25□□□□□ -0.93
YKR040CYKR040C SSU72P53538 206 aaPredicted RBP9.25□□□□□ -0.93
YKR040CYKR040C YML122CQ03207 126 aa9.25□□□□□ -0.93
YKR040CYKR040C RKI1Q12189 258 aa9.25□□□□□ -0.93
YKR040CYKR040C SCM3Q12334 223 aa9.25□□□□□ -0.93
YKR040CYKR040C URA5P13298 226 aaKnown RBP9.24□□□□□ -0.93
YKR040CYKR040C GLY1P37303 387 aaKnown RBP9.24□□□□□ -0.93
YKR040CYKR040C YPT31P38555 223 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms