RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YFR032C-BQ8TGU2 87 aa1.68□□□□□ -2.14
YPT52YKR014C MDS3P53094 1487 aa1.68□□□□□ -2.14
YPT52YKR014C REV3P14284 1504 aa1.67□□□□□ -2.14
YPT52YKR014C MRS1P07266 363 aa1.67□□□□□ -2.14
YPT52YKR014C MRPL17P36528 281 aa1.67□□□□□ -2.14
YPT52YKR014C PHO88P38264 188 aaPredicted RBP1.67□□□□□ -2.14
YPT52YKR014C ERV15P38312 142 aa1.67□□□□□ -2.14
YPT52YKR014C YKE4P40544 346 aa1.67□□□□□ -2.14
YPT52YKR014C RTC4P53850 401 aa1.67□□□□□ -2.14
YPT52YKR014C GGA1Q06336 557 aa1.67□□□□□ -2.14
YPT52YKR014C USB1Q12208 290 aaKnown RBP1.67□□□□□ -2.14
YPT52YKR014C SSK2P53599 1579 aa1.67□□□□□ -2.14
YPT52YKR014C TIM9O74700 87 aa1.66□□□□□ -2.14
YPT52YKR014C RPB3P16370 318 aaKnown RBP1.66□□□□□ -2.14
YPT52YKR014C CKS1P20486 150 aaKnown RBP1.66□□□□□ -2.14
YPT52YKR014C SCL1P21243 252 aaKnown RBP1.66□□□□□ -2.14
YPT52YKR014C ATP7P30902 174 aa1.66□□□□□ -2.14
YPT52YKR014C CAF4P36130 643 aa1.66□□□□□ -2.14
YPT52YKR014C GLE2P40066 365 aa1.66□□□□□ -2.14
YPT52YKR014C AYR1P40471 297 aa1.66□□□□□ -2.14
YPT52YKR014C ICE2P40499 491 aa1.66□□□□□ -2.14
YPT52YKR014C ERG25P53045 309 aa1.66□□□□□ -2.14
YPT52YKR014C IGO2Q9P305 131 aa1.66□□□□□ -2.14
YPT52YKR014C MYO2P19524 1574 aaKnown RBP1.66□□□□□ -2.14
YPT52YKR014C ATG2P53855 1592 aa1.66□□□□□ -2.14
YPT52YKR014C XRN1P22147 1528 aaKnown RBP1.66□□□□□ -2.14
YPT52YKR014C SSN2P38931 1420 aa1.66□□□□□ -2.14
YPT52YKR014C PET9P18239 318 aaKnown RBP1.65□□□□□ -2.15
YPT52YKR014C SNC2P33328 115 aa1.65□□□□□ -2.15
YPT52YKR014C UMP1P38293 148 aa1.65□□□□□ -2.15
YPT52YKR014C GVP36P40531 326 aaKnown RBP1.65□□□□□ -2.15
YPT52YKR014C YNR062CP53748 327 aa1.65□□□□□ -2.15
YPT52YKR014C FUS2Q05670 677 aa1.65□□□□□ -2.15
YPT52YKR014C YET3Q07451 203 aa1.65□□□□□ -2.15
YPT52YKR014C MBF1O14467 151 aaKnown RBP1.64□□□□□ -2.15
YPT52YKR014C RAS2P01120 322 aaKnown RBP1.64□□□□□ -2.15
YPT52YKR014C SHG1P38337 142 aa1.64□□□□□ -2.15
YPT52YKR014C YHR022CP38763 256 aa1.64□□□□□ -2.15
YPT52YKR014C SEC72P39742 193 aaKnown RBP1.64□□□□□ -2.15
YPT52YKR014C PDS1P40316 373 aaPredicted RBP1.64□□□□□ -2.15
YPT52YKR014C TIR3P40552 269 aa1.64□□□□□ -2.15
YPT52YKR014C DOC1P53068 250 aa1.64□□□□□ -2.15
YPT52YKR014C YNL184CP53876 108 aa1.64□□□□□ -2.15
YPT52YKR014C CYT2Q00873 224 aa1.64□□□□□ -2.15
YPT52YKR014C HNT1Q04344 158 aaKnown RBP1.64□□□□□ -2.15
YPT52YKR014C NOC4Q06512 552 aaPredicted RBP1.64□□□□□ -2.15
YPT52YKR014C YLR036CQ07986 203 aa1.64□□□□□ -2.15
YPT52YKR014C PEP1P32319 1579 aa1.64□□□□□ -2.15
YPT52YKR014C SNF4P12904 322 aa1.63□□□□□ -2.15
YPT52YKR014C ATP15P21306 62 aa1.63□□□□□ -2.15
YPT52YKR014C CNB1P25296 175 aa1.63□□□□□ -2.15
YPT52YKR014C TAH1P25638 111 aaPredicted RBP1.63□□□□□ -2.15
YPT52YKR014C YET1P35723 206 aa1.63□□□□□ -2.15
YPT52YKR014C SVP26P38869 228 aa1.63□□□□□ -2.15
YPT52YKR014C EGD2P38879 174 aaKnown RBP1.63□□□□□ -2.15
YPT52YKR014C PEP8P40335 379 aa1.63□□□□□ -2.15
YPT52YKR014C ERG10P41338 398 aaKnown RBP1.63□□□□□ -2.15
YPT52YKR014C EAF6P47128 113 aa1.63□□□□□ -2.15
YPT52YKR014C ARO80Q04052 950 aa1.63□□□□□ -2.15
YPT52YKR014C YOL024WQ08172 172 aa1.63□□□□□ -2.15
YPT52YKR014C ESP1Q03018 1630 aa1.62□□□□□ -2.15
YPT52YKR014C TRX3P25372 127 aa1.62□□□□□ -2.15
YPT52YKR014C YCR090CP25654 182 aaKnown RBP1.62□□□□□ -2.15
YPT52YKR014C OCH1P31755 480 aa1.62□□□□□ -2.15
YPT52YKR014C YBR285WP38354 144 aa1.62□□□□□ -2.15
YPT52YKR014C AIM2P39721 246 aa1.62□□□□□ -2.15
YPT52YKR014C VTC1P40046 129 aaRIP-Chip data1.62□□□□□ -2.15not detected
YPT52YKR014C AGE2P40529 298 aa1.62□□□□□ -2.15
YPT52YKR014C ARP3P47117 449 aaKnown RBP1.62□□□□□ -2.15
YPT52YKR014C UBC12P52491 188 aa1.62□□□□□ -2.15
YPT52YKR014C BOL2P53082 120 aa1.62□□□□□ -2.15
YPT52YKR014C NRK1P53915 240 aa1.62□□□□□ -2.15
YPT52YKR014C YDR274CP87283 123 aa1.62□□□□□ -2.15
YPT52YKR014C GRX8Q05926 109 aa1.62□□□□□ -2.15
YPT52YKR014C GRE1Q08969 168 aa1.62□□□□□ -2.15
YPT52YKR014C RIO1Q12196 484 aaKnown RBP1.62□□□□□ -2.15
YPT52YKR014C PDR18P53756 1333 aa1.62□□□□□ -2.15
YPT52YKR014C DDI2P0CH63 225 aa1.61□□□□□ -2.15
YPT52YKR014C DDI3P0CH64 225 aa1.61□□□□□ -2.15
YPT52YKR014C GCY1P14065 312 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
YPT52YKR014C OPY1P38271 328 aa1.61□□□□□ -2.15
YPT52YKR014C DSE2P38844 325 aa1.61□□□□□ -2.15
YPT52YKR014C YNL217WP40152 326 aa1.61□□□□□ -2.15
YPT52YKR014C POG1P40473 351 aa1.61□□□□□ -2.15
YPT52YKR014C SKI6P46948 246 aaPredicted RBP1.61□□□□□ -2.15
YPT52YKR014C ARO8P53090 500 aaKnown RBP1.61□□□□□ -2.15
YPT52YKR014C YNR077CP53758 84 aa1.61□□□□□ -2.15
YPT52YKR014C SNO1Q03144 224 aa1.61□□□□□ -2.15
YPT52YKR014C YLR031WQ07978 186 aa1.61□□□□□ -2.15
YPT52YKR014C FSF1Q12029 327 aaKnown RBP1.61□□□□□ -2.15
YPT52YKR014C YDL085C-AQ3E7B7 68 aaKnown RBP1.61□□□□□ -2.15
YPT52YKR014C YPK9Q12697 1472 aa1.61□□□□□ -2.15
YPT52YKR014C BPT1P14772 1559 aa1.6□□□□□ -2.15
YPT52YKR014C TAF2P23255 1407 aa1.6□□□□□ -2.15
YPT52YKR014C MET5P47169 1442 aa1.6□□□□□ -2.15
YPT52YKR014C ECM5Q03214 1411 aa1.6□□□□□ -2.15
YPT52YKR014C TRR1P29509 319 aaKnown RBP1.6□□□□□ -2.15
YPT52YKR014C FZF1P32805 299 aa1.6□□□□□ -2.15
YPT52YKR014C PAN3P36102 679 aaPredicted RBP1.6□□□□□ -2.15
YPT52YKR014C DGA1Q08650 418 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms