RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W YER145C-AA0A023PYF4 145 aa3.75□□□□□ -1.81
SSH4YKL124W YOR304C-AO14468 76 aa3.75□□□□□ -1.81
SSH4YKL124W MSI1P13712 422 aa3.75□□□□□ -1.81
SSH4YKL124W PCL1P24867 279 aa3.75□□□□□ -1.81
SSH4YKL124W SHE1P38200 338 aa3.75□□□□□ -1.81
SSH4YKL124W QDR3P38227 689 aa3.75□□□□□ -1.81
SSH4YKL124W IMD2P38697 523 aaKnown RBP3.75□□□□□ -1.81
SSH4YKL124W LSM12P38828 187 aaKnown RBP3.75□□□□□ -1.81
SSH4YKL124W MRPL49P40858 161 aaPredicted RBP3.75□□□□□ -1.81
SSH4YKL124W CIN2P46670 268 aa3.75□□□□□ -1.81
SSH4YKL124W YIP4P53093 235 aa3.75□□□□□ -1.81
SSH4YKL124W SAY1P53324 424 aa3.75□□□□□ -1.81
SSH4YKL124W MSO1P53604 210 aaKnown RBP3.75□□□□□ -1.81
SSH4YKL124W NRG1Q03125 231 aa3.75□□□□□ -1.81
SSH4YKL124W POS5Q06892 414 aa3.75□□□□□ -1.81
SSH4YKL124W PEX27Q08580 376 aa3.75□□□□□ -1.81
SSH4YKL124W YDR215CQ12240 137 aa3.75□□□□□ -1.81
SSH4YKL124W TRM10Q12400 293 aa3.75□□□□□ -1.81
SSH4YKL124W POM34Q12445 299 aa3.75□□□□□ -1.81
SSH4YKL124W YPR1Q12458 312 aa3.75□□□□□ -1.81
SSH4YKL124W RPL25P04456 142 aaKnown RBP3.74□□□□□ -1.81
SSH4YKL124W AAC1P04710 309 aa3.74□□□□□ -1.81
SSH4YKL124W COX9P07255 59 aa3.74□□□□□ -1.81
SSH4YKL124W RPB9P27999 122 aa3.74□□□□□ -1.81
SSH4YKL124W YGR210CP42942 411 aa3.74□□□□□ -1.81
SSH4YKL124W YJL016WP47072 561 aa3.74□□□□□ -1.81
SSH4YKL124W AAH1P53909 347 aa3.74□□□□□ -1.81
SSH4YKL124W NRK1P53915 240 aa3.74□□□□□ -1.81
SSH4YKL124W YLR152CP54072 576 aa3.74□□□□□ -1.81
SSH4YKL124W YGK3Q12222 375 aaPredicted RBP3.74□□□□□ -1.81
SSH4YKL124W IES3Q12345 250 aa3.74□□□□□ -1.81
SSH4YKL124W MED11Q99278 115 aa3.74□□□□□ -1.81
SSH4YKL124W CCW14O13547 238 aa3.73□□□□□ -1.81
SSH4YKL124W RPL30P14120 105 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W PRE7P23724 241 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W ACH1P32316 526 aa3.73□□□□□ -1.81
SSH4YKL124W UGX2P32772 223 aa3.73□□□□□ -1.81
SSH4YKL124W SHG1P38337 142 aa3.73□□□□□ -1.81
SSH4YKL124W YER188WP40103 239 aa3.73□□□□□ -1.81
SSH4YKL124W AIM24P47127 394 aa3.73□□□□□ -1.81
SSH4YKL124W GEP7P53171 287 aa3.73□□□□□ -1.81
SSH4YKL124W PAU12P53343 120 aa3.73□□□□□ -1.81
SSH4YKL124W SMM1P53720 384 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W MRX9Q07349 420 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W FRE8Q12209 686 aa3.73□□□□□ -1.81
SSH4YKL124W CDC28P00546 298 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W SPS4P09937 338 aa3.73□□□□□ -1.81
SSH4YKL124W RPL31BP0C2H9 113 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W YLL053CP0CD98 152 aa3.73□□□□□ -1.81
SSH4YKL124W MRP1P10662 321 aaKnown RBP3.73□□□□□ -1.81
SSH4YKL124W MSS1P32559 526 aaPredicted RBP3.73□□□□□ -1.81
SSH4YKL124W GPI18P38211 433 aa3.73□□□□□ -1.81
SSH4YKL124W UIP3P39547 235 aa3.73□□□□□ -1.81
SSH4YKL124W DDI1P40087 428 aa3.73□□□□□ -1.81
SSH4YKL124W DLS1P40366 167 aa3.73□□□□□ -1.81
SSH4YKL124W TIR3P40552 269 aa3.73□□□□□ -1.81
SSH4YKL124W YJR011CP47086 261 aaPredicted RBP3.73□□□□□ -1.81
SSH4YKL124W GRX5Q02784 150 aa3.73□□□□□ -1.81
SSH4YKL124W MSS11Q03825 758 aa3.73□□□□□ -1.81
SSH4YKL124W CSI2Q08054 341 aa3.73□□□□□ -1.81
SSH4YKL124W YCL048W-AQ2V2Q2 79 aa3.73□□□□□ -1.81
SSH4YKL124W RPL39P04650 51 aa3.72□□□□□ -1.81
SSH4YKL124W SGA1P08019 549 aa3.72□□□□□ -1.81
SSH4YKL124W VAM7P32912 316 aa3.72□□□□□ -1.81
SSH4YKL124W YBR144CP34215 104 aa3.72□□□□□ -1.81
SSH4YKL124W SDS24P38314 527 aa3.72□□□□□ -1.81
SSH4YKL124W ERJ5P43613 295 aaPredicted RBP3.72□□□□□ -1.81
SSH4YKL124W UFD1P53044 361 aa3.72□□□□□ -1.81
SSH4YKL124W YNR064CP53750 290 aa3.72□□□□□ -1.81
SSH4YKL124W YKR005CQ02203 525 aa3.72□□□□□ -1.81
SSH4YKL124W ABF2Q02486 183 aa3.72□□□□□ -1.81
SSH4YKL124W YPL067CQ02754 198 aa3.72□□□□□ -1.81
SSH4YKL124W LDS2Q08218 356 aa3.72□□□□□ -1.81
SSH4YKL124W PPZ2P33329 710 aa3.71□□□□□ -1.82
SSH4YKL124W PHD1P36093 366 aa3.71□□□□□ -1.82
SSH4YKL124W PAU24P38155 120 aa3.71□□□□□ -1.82
SSH4YKL124W YBR137WP38276 179 aa3.71□□□□□ -1.82
SSH4YKL124W COX15P40086 486 aa3.71□□□□□ -1.82
SSH4YKL124W AIM34Q03673 198 aa3.71□□□□□ -1.82
SSH4YKL124W PIN3Q06449 215 aa3.71□□□□□ -1.82
SSH4YKL124W MRPS28P21771 286 aa3.7□□□□□ -1.82
SSH4YKL124W CNB1P25296 175 aa3.7□□□□□ -1.82
SSH4YKL124W AHC2P25649 128 aa3.7□□□□□ -1.82
SSH4YKL124W POP5P28005 173 aa3.7□□□□□ -1.82
SSH4YKL124W MSK1P32048 576 aa3.7□□□□□ -1.82
SSH4YKL124W VMA11P32842 164 aa3.7□□□□□ -1.82
SSH4YKL124W ZRT3P34240 503 aa3.7□□□□□ -1.82
SSH4YKL124W YKR041WP36134 250 aa3.7□□□□□ -1.82
SSH4YKL124W NVJ1P38881 321 aa3.7□□□□□ -1.82
SSH4YKL124W YER076CP40049 302 aa3.7□□□□□ -1.82
SSH4YKL124W GPI14P47088 403 aaKnown RBP3.7□□□□□ -1.82
SSH4YKL124W XPT1P47165 209 aa3.7□□□□□ -1.82
SSH4YKL124W ALG13P53178 202 aa3.7□□□□□ -1.82
SSH4YKL124W NCE103P53615 221 aa3.7□□□□□ -1.82
SSH4YKL124W ACT1P60010 375 aaKnown RBP3.7□□□□□ -1.82
SSH4YKL124W YMR254CQ04838 102 aa3.7□□□□□ -1.82
SSH4YKL124W RGC1Q06108 1083 aaKnown RBP3.7□□□□□ -1.82
SSH4YKL124W TY1A-NL1Q12391 440 aaKnown RBP3.7□□□□□ -1.82
SSH4YKL124W RDI1Q12434 202 aa3.7□□□□□ -1.82
SSH4YKL124W YCR023CP25351 611 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms