RNA–Protein interactions for RNA: YKL072W

STB6, Transcript of Protein that binds Sin3p in a two-hybrid assay, yeast

Gene STB6, Length 2,301 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STB6	YKL072W	RRP17	Q04031	235 aa	Predicted RBP	0.82	□□□□□ -2.28
STB6	YKL072W	DYN3	Q04949	312 aa		0.82	□□□□□ -2.28
STB6	YKL072W	NEJ1	Q06148	342 aa		0.82	□□□□□ -2.28
STB6	YKL072W	SHH4	Q06236	168 aa		0.82	□□□□□ -2.28
STB6	YKL072W	FEX1	Q08913	375 aa		0.82	□□□□□ -2.28
STB6	YKL072W	FEX2	Q08991	375 aa		0.82	□□□□□ -2.28
STB6	YKL072W	NOT5	Q12514	560 aa	Predicted RBP	0.82	□□□□□ -2.28
STB6	YKL072W	FKS1	P38631	1876 aa	Known RBP	0.82	□□□□□ -2.28
STB6	YKL072W	TIM9	O74700	87 aa		0.81	□□□□□ -2.28
STB6	YKL072W	RPL26A	P05743	127 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	RPB3	P16370	318 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	KRE1	P17260	313 aa		0.81	□□□□□ -2.28
STB6	YKL072W	TOM40	P23644	387 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	AHC2	P25649	128 aa		0.81	□□□□□ -2.28
STB6	YKL072W	ADE1	P27616	306 aa		0.81	□□□□□ -2.28
STB6	YKL072W	CLB6	P32943	380 aa		0.81	□□□□□ -2.28
STB6	YKL072W	SRY1	P36007	326 aa		0.81	□□□□□ -2.28
STB6	YKL072W	UMP1	P38293	148 aa		0.81	□□□□□ -2.28
STB6	YKL072W	YBR209W	P38311	105 aa		0.81	□□□□□ -2.28
STB6	YKL072W	YER134C	P40081	178 aa		0.81	□□□□□ -2.28
STB6	YKL072W	RPL33B	P41056	107 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	XPT1	P47165	209 aa		0.81	□□□□□ -2.28
STB6	YKL072W	SBH2	P52871	88 aa		0.81	□□□□□ -2.28
STB6	YKL072W	RPL26B	P53221	127 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	YGR050C	P53231	118 aa		0.81	□□□□□ -2.28
STB6	YKL072W	SLM2	P53955	656 aa		0.81	□□□□□ -2.28
STB6	YKL072W	NUP49	Q02199	472 aa		0.81	□□□□□ -2.28
STB6	YKL072W	DPM1	P14020	267 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	NSP1	P14907	823 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	PET9	P18239	318 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	APA2	P22108	325 aa		0.81	□□□□□ -2.28
STB6	YKL072W	TCA17	P32613	152 aa		0.81	□□□□□ -2.28
STB6	YKL072W	FIG1	P38224	298 aa		0.81	□□□□□ -2.28
STB6	YKL072W	ERV15	P38312	142 aa		0.81	□□□□□ -2.28
STB6	YKL072W	TVP23	P38962	199 aa		0.81	□□□□□ -2.28
STB6	YKL072W	FCY21	P40039	528 aa		0.81	□□□□□ -2.28
STB6	YKL072W	ICE2	P40499	491 aa		0.81	□□□□□ -2.28
STB6	YKL072W	GVP36	P40531	326 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	YJL144W	P47009	104 aa		0.81	□□□□□ -2.28
STB6	YKL072W	ARO8	P53090	500 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	COS6	P53344	381 aa		0.81	□□□□□ -2.28
STB6	YKL072W	MPA43	P53583	542 aa	Predicted RBP	0.81	□□□□□ -2.28
STB6	YKL072W	YIP3	P53633	176 aa		0.81	□□□□□ -2.28
STB6	YKL072W	YNL184C	P53876	108 aa		0.81	□□□□□ -2.28
STB6	YKL072W	YNL140C	P53910	189 aa		0.81	□□□□□ -2.28
STB6	YKL072W	YLR460C	P54007	376 aa		0.81	□□□□□ -2.28
STB6	YKL072W	SPG3	Q04398	127 aa	Predicted RBP	0.81	□□□□□ -2.28
STB6	YKL072W	USB1	Q12208	290 aa	Known RBP	0.81	□□□□□ -2.28
STB6	YKL072W	PSF1	Q12488	208 aa		0.81	□□□□□ -2.28
STB6	YKL072W	YCL012C	Q8J0M4	134 aa		0.81	□□□□□ -2.28
STB6	YKL072W	QCR6	P00127	147 aa		0.8	□□□□□ -2.28
STB6	YKL072W	TVP38	P36164	337 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YBR285W	P38354	144 aa		0.8	□□□□□ -2.28
STB6	YKL072W	SOK1	P40317	901 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YKE4	P40544	346 aa		0.8	□□□□□ -2.28
STB6	YKL072W	EAF6	P47128	113 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YGL235W	P53071	178 aa		0.8	□□□□□ -2.28
STB6	YKL072W	VPS28	Q02767	242 aa		0.8	□□□□□ -2.28
STB6	YKL072W	VPS71	Q03433	280 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YDR391C	Q04170	232 aa		0.8	□□□□□ -2.28
STB6	YKL072W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
STB6	YKL072W	HRD1	Q08109	551 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YOR283W	Q12040	230 aa	Known RBP	0.8	□□□□□ -2.28
STB6	YKL072W	MPD1	Q12404	318 aa	Known RBP	0.8	□□□□□ -2.28
STB6	YKL072W	EMC6	Q12431	108 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YFR032C-B	Q8TGU2	87 aa		0.8	□□□□□ -2.28
STB6	YKL072W	CCH1	P50077	2039 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YAR023C	D6VPM8	179 aa		0.8	□□□□□ -2.28
STB6	YKL072W	CNB1	P25296	175 aa		0.8	□□□□□ -2.28
STB6	YKL072W	TFC1	P32367	649 aa		0.8	□□□□□ -2.28
STB6	YKL072W	SRP102	P36057	244 aa	Predicted RBP	0.8	□□□□□ -2.28
STB6	YKL072W	PAN3	P36102	679 aa	Predicted RBP	0.8	□□□□□ -2.28
STB6	YKL072W	DER1	P38307	211 aa		0.8	□□□□□ -2.28
STB6	YKL072W	AME1	P38313	324 aa		0.8	□□□□□ -2.28
STB6	YKL072W	NSG1	P38837	291 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YEA4	P40004	342 aa		0.8	□□□□□ -2.28
STB6	YKL072W	IRC22	P40006	225 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YNL217W	P40152	326 aa		0.8	□□□□□ -2.28
STB6	YKL072W	CUP9	P41817	306 aa		0.8	□□□□□ -2.28
STB6	YKL072W	GLR1	P41921	483 aa	Known RBP	0.8	□□□□□ -2.28
STB6	YKL072W	RPA43	P46669	326 aa		0.8	□□□□□ -2.28
STB6	YKL072W	ARP3	P47117	449 aa	Known RBP	0.8	□□□□□ -2.28
STB6	YKL072W	TDA4	P47153	279 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YNL247W	P53852	767 aa	Known RBP	0.8	□□□□□ -2.28
STB6	YKL072W	PGA1	P53896	198 aa		0.8	□□□□□ -2.28
STB6	YKL072W	IGO1	P53897	168 aa		0.8	□□□□□ -2.28
STB6	YKL072W	DAD3	P69850	94 aa		0.8	□□□□□ -2.28
STB6	YKL072W	MIX17	Q03667	156 aa		0.8	□□□□□ -2.28
STB6	YKL072W	RAV2	Q03956	351 aa		0.8	□□□□□ -2.28
STB6	YKL072W	CUE4	Q04201	117 aa	Predicted RBP	0.8	□□□□□ -2.28
STB6	YKL072W	TRM12	Q04235	462 aa		0.8	□□□□□ -2.28
STB6	YKL072W	SHH3	Q04487	196 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YOL014W	Q08110	124 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YLR412C-A	Q3E742	68 aa		0.8	□□□□□ -2.28
STB6	YKL072W	YML100W-A	Q8TGT0	57 aa		0.8	□□□□□ -2.28
STB6	YKL072W	TAF2	P23255	1407 aa		0.79	□□□□□ -2.28
STB6	YKL072W	REP2	P03872	296 aa		0.79	□□□□□ -2.28
STB6	YKL072W	PEX4	P29340	183 aa		0.79	□□□□□ -2.28
STB6	YKL072W	NUF2	P33895	451 aa		0.79	□□□□□ -2.28
STB6	YKL072W	YKL102C	P34249	101 aa		0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms