RNA–Protein interactions for RNA: YKL040C

NFU1, Transcript of Protein involved in iron metabolism in mitochondria, yeast

Gene NFU1, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFU1	YKL040C	RPC17	P47076	161 aa		0.48	□□□□□ -2.33
NFU1	YKL040C	YDR249C	Q03787	373 aa		0.48	□□□□□ -2.33
NFU1	YKL040C	UTP30	P36144	274 aa	Known RBP	0.47	□□□□□ -2.33
NFU1	YKL040C	IKI3	Q06706	1349 aa	Known RBP	0.46	□□□□□ -2.34
NFU1	YKL040C	RPL28	P02406	149 aa	Known RBP	0.46	□□□□□ -2.34
NFU1	YKL040C	CKS1	P20486	150 aa	Known RBP	0.46	□□□□□ -2.34
NFU1	YKL040C	YPL073C	P40323	161 aa		0.46	□□□□□ -2.34
NFU1	YKL040C	YFH7	P43591	353 aa		0.46	□□□□□ -2.34
NFU1	YKL040C	YOL160W	Q08321	113 aa		0.46	□□□□□ -2.34
NFU1	YKL040C	YRA1	Q12159	226 aa	Known RBP	0.46	□□□□□ -2.34
NFU1	YKL040C	CFT1	Q06632	1357 aa	Known RBP	0.45	□□□□□ -2.34
NFU1	YKL040C	RPL27A	P0C2H6	136 aa	Known RBP	0.45	□□□□□ -2.34
NFU1	YKL040C	RPB3	P16370	318 aa	Known RBP	0.45	□□□□□ -2.34
NFU1	YKL040C	MAG1	P22134	296 aa	Known RBP	0.45	□□□□□ -2.34
NFU1	YKL040C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.45	□□□□□ -2.34	not detected
NFU1	YKL040C	VMA22	P38784	181 aa		0.45	□□□□□ -2.34
NFU1	YKL040C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.45	□□□□□ -2.34	not detected
NFU1	YKL040C	LCL2	Q08045	131 aa		0.45	□□□□□ -2.34
NFU1	YKL040C	RPL25	P04456	142 aa	Known RBP	0.44	□□□□□ -2.34
NFU1	YKL040C	MATALPHA1	P0CY06	175 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	HMLALPHA1	P0CY07	175 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	RPL24B	P24000	155 aa	Known RBP	0.44	□□□□□ -2.34
NFU1	YKL040C	YCL042W	P25572	119 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	VMA6	P32366	345 aa	Known RBP	0.44	□□□□□ -2.34
NFU1	YKL040C	MGM101	P32787	269 aa	Known RBP	0.44	□□□□□ -2.34
NFU1	YKL040C	ALG13	P53178	202 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	YGR050C	P53231	118 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	YMR252C	Q04814	134 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	YFR032C-B	Q8TGU2	87 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	SEY1	Q99287	776 aa		0.44	□□□□□ -2.34
NFU1	YKL040C	INO80	P53115	1489 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	PRP8	P33334	2413 aa	Known RBP	0.43	□□□□□ -2.34
NFU1	YKL040C	GCN3	P14741	305 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	ATP15	P21306	62 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	SPO13	P23624	291 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	YEA4	P40004	342 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	RRN5	Q02983	363 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	YMR226C	Q05016	267 aa	Known RBP	0.43	□□□□□ -2.34
NFU1	YKL040C	DGA1	Q08650	418 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	YHR214C-E	Q8TGK0	99 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	ODC2	Q99297	307 aa		0.43	□□□□□ -2.34
NFU1	YKL040C	YLR422W	Q06409	1932 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	FMP27	Q06179	2628 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	YMR31	P19955	123 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	HPA3	P39979	161 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	AIM25	P47140	327 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	GET1	P53192	235 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	UPS3	Q04006	179 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	JLP1	Q12358	412 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	RIF1	P29539	1916 aa		0.42	□□□□□ -2.34
NFU1	YKL040C	FMP49	A0A023PZB3	126 aa		0.41	□□□□□ -2.34
NFU1	YKL040C	RHO1	P06780	209 aa	Known RBP	0.41	□□□□□ -2.34
NFU1	YKL040C	SEC4	P07560	215 aa	Known RBP	0.41	□□□□□ -2.34
NFU1	YKL040C	PPA2	P28239	310 aa		0.41	□□□□□ -2.34
NFU1	YKL040C	RPB7	P34087	171 aa		0.41	□□□□□ -2.34
NFU1	YKL040C	PRX1	P34227	261 aa	Known RBP	0.41	□□□□□ -2.34
NFU1	YKL040C	MIC12	P38341	106 aa		0.41	□□□□□ -2.34
NFU1	YKL040C	LSM7	P53905	115 aa	Known RBP	0.41	□□□□□ -2.34
NFU1	YKL040C	HNT1	Q04344	158 aa	Known RBP	0.41	□□□□□ -2.34
NFU1	YKL040C	PRP11	Q07350	266 aa	Predicted RBP	0.41	□□□□□ -2.34
NFU1	YKL040C	MDM32	Q12171	622 aa		0.41	□□□□□ -2.34
NFU1	YKL040C	THP2	O13539	261 aa	Known RBP	0.4	□□□□□ -2.35
NFU1	YKL040C	YCR090C	P25654	182 aa	Known RBP	0.4	□□□□□ -2.35
NFU1	YKL040C	UGX2	P32772	223 aa		0.4	□□□□□ -2.35
NFU1	YKL040C	TRM5	P38793	499 aa		0.4	□□□□□ -2.35
NFU1	YKL040C	HMF1	P40037	129 aa	Known RBP	0.4	□□□□□ -2.35
NFU1	YKL040C	COG5	P53951	403 aa		0.4	□□□□□ -2.35
NFU1	YKL040C	YLR460C	P54007	376 aa		0.4	□□□□□ -2.35
NFU1	YKL040C	DAD4	P69851	72 aa		0.4	□□□□□ -2.35
NFU1	YKL040C	YMR295C	Q03559	197 aa		0.4	□□□□□ -2.35
NFU1	YKL040C	DUR1,2	P32528	1835 aa	Known RBP	0.4	□□□□□ -2.35
NFU1	YKL040C	YBR121C-A	P0C5L4	52 aa		0.39	□□□□□ -2.35
NFU1	YKL040C	PAN3	P36102	679 aa	Predicted RBP	0.39	□□□□□ -2.35
NFU1	YKL040C	YHL018W	P38744	120 aa	Predicted RBP	0.39	□□□□□ -2.35
NFU1	YKL040C	AIM2	P39721	246 aa		0.39	□□□□□ -2.35
NFU1	YKL040C	YEL008W	P40001	126 aa		0.39	□□□□□ -2.35
NFU1	YKL040C	YRB1	P41920	201 aa	Known RBP	0.39	□□□□□ -2.35
NFU1	YKL040C	ADO1	P47143	340 aa	Known RBP	0.39	□□□□□ -2.35
NFU1	YKL040C	UBC12	P52491	188 aa		0.39	□□□□□ -2.35
NFU1	YKL040C	MPC3	P53311	146 aa		0.39	□□□□□ -2.35
NFU1	YKL040C	PDR17	P53844	350 aa		0.39	□□□□□ -2.35
NFU1	YKL040C	TOR1	P35169	2470 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	POR1	P04840	283 aa	Known RBP	0.38	□□□□□ -2.35
NFU1	YKL040C	UBC8	P28263	218 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	MRPL15	P36523	253 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	YIL102C	P40488	101 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	IRC18	P47056	224 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	FUS2	Q05670	677 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	IRC23	Q08416	157 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	COA3	Q3E7B2	85 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	TAO3	P40468	2376 aa		0.38	□□□□□ -2.35
NFU1	YKL040C	COX8	P04039	78 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	CUP1-1	P0CX80	61 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	CUP1-2	P0CX81	61 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	YPK2	P18961	677 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	OCH1	P31755	480 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	ARO7	P32178	256 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	SFK1	P35735	353 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	YER085C	P40058	173 aa		0.37	□□□□□ -2.35
NFU1	YKL040C	DIG2	Q03373	323 aa	Known RBP	0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 91.1 ms