RNA–Protein interactions for RNA: YJR112W

NNF1, Transcript of Essential component of the MIND kinetochore complex, yeastyeast

Gene NNF1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NNF1YJR112W YNR073CP0CX09 502 aa2.18□□□□□ -2.06
NNF1YJR112W SIP3P38717 1229 aa2.18□□□□□ -2.06
NNF1YJR112W RPF1P38805 295 aaKnown RBP2.18□□□□□ -2.06
NNF1YJR112W YHR125WP38831 101 aa2.18□□□□□ -2.06
NNF1YJR112W ARC15P40518 154 aaRIP-Chip data2.18□□□□□ -2.06not detected
NNF1YJR112W SMD3P43321 101 aaKnown RBP2.18□□□□□ -2.06
NNF1YJR112W RPA43P46669 326 aa2.18□□□□□ -2.06
NNF1YJR112W ADO1P47143 340 aaKnown RBP2.18□□□□□ -2.06
NNF1YJR112W YML096WQ04489 525 aa2.18□□□□□ -2.06
NNF1YJR112W JLP1Q12358 412 aa2.18□□□□□ -2.06
NNF1YJR112W GCN1P33892 2672 aaKnown RBP2.18□□□□□ -2.06
NNF1YJR112W IRA2P19158 3079 aa2.18□□□□□ -2.06
NNF1YJR112W RAD50P12753 1312 aa2.17□□□□□ -2.06
NNF1YJR112W YBR056W-AI2HB52 66 aa2.17□□□□□ -2.06
NNF1YJR112W CDC28P00546 298 aaKnown RBP2.17□□□□□ -2.06
NNF1YJR112W YHR032W-AP0C5N6 59 aa2.17□□□□□ -2.06
NNF1YJR112W FPR1P20081 114 aaKnown RBP2.17□□□□□ -2.06
NNF1YJR112W DBF2P22204 572 aa2.17□□□□□ -2.06
NNF1YJR112W UTR5P32630 166 aa2.17□□□□□ -2.06
NNF1YJR112W TAF14P35189 244 aa2.17□□□□□ -2.06
NNF1YJR112W FIS1P40515 155 aa2.17□□□□□ -2.06
NNF1YJR112W DIA1P54005 336 aa2.17□□□□□ -2.06
NNF1YJR112W VPS68Q12016 184 aa2.17□□□□□ -2.06
NNF1YJR112W YOR020W-AQ3E824 90 aa2.17□□□□□ -2.06
NNF1YJR112W JIP3O13555 125 aa2.16□□□□□ -2.06
NNF1YJR112W CCA1P21269 546 aa2.16□□□□□ -2.06
NNF1YJR112W CTR2P38865 189 aa2.16□□□□□ -2.06
NNF1YJR112W MRPL49P40858 161 aaPredicted RBP2.16□□□□□ -2.06
NNF1YJR112W YJR056CP47115 236 aa2.16□□□□□ -2.06
NNF1YJR112W CGR1P53188 120 aa2.16□□□□□ -2.06
NNF1YJR112W SLM2P53955 656 aa2.16□□□□□ -2.06
NNF1YJR112W YMR279CQ03263 540 aa2.16□□□□□ -2.06
NNF1YJR112W TLG1Q03322 224 aa2.16□□□□□ -2.06
NNF1YJR112W ATG39Q06159 398 aa2.16□□□□□ -2.06
NNF1YJR112W ACC1Q00955 2233 aaKnown RBP2.15□□□□□ -2.06
NNF1YJR112W ADH3P07246 375 aaKnown RBP2.15□□□□□ -2.07
NNF1YJR112W FCY2P17064 533 aa2.15□□□□□ -2.07
NNF1YJR112W SCO1P23833 295 aa2.15□□□□□ -2.07
NNF1YJR112W OAC1P32332 324 aa2.15□□□□□ -2.07
NNF1YJR112W SCM4P32564 187 aa2.15□□□□□ -2.07
NNF1YJR112W CLB6P32943 380 aa2.15□□□□□ -2.07
NNF1YJR112W YAR068WP39564 161 aa2.15□□□□□ -2.07
NNF1YJR112W DSK2P48510 373 aa2.15□□□□□ -2.07
NNF1YJR112W BXI1P48558 297 aa2.15□□□□□ -2.07
NNF1YJR112W CUS2P53830 285 aaPredicted RBP2.15□□□□□ -2.07
NNF1YJR112W ABF2Q02486 183 aa2.15□□□□□ -2.07
NNF1YJR112W MRPS17Q03246 237 aaPredicted RBP2.15□□□□□ -2.07
NNF1YJR112W YIL046W-AQ3E7Z4 54 aa2.15□□□□□ -2.07
NNF1YJR112W IRA1P18963 3092 aa2.15□□□□□ -2.07
NNF1YJR112W LAA1P39526 2014 aa2.14□□□□□ -2.07
NNF1YJR112W RFA3P26755 122 aaKnown RBP2.14□□□□□ -2.07
NNF1YJR112W IDH1P28834 360 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
NNF1YJR112W SRX1P36077 127 aa2.14□□□□□ -2.07
NNF1YJR112W YBR063CP38083 404 aa2.14□□□□□ -2.07
NNF1YJR112W ECM33P38248 429 aaKnown RBP2.14□□□□□ -2.07
NNF1YJR112W RFC4P40339 323 aaKnown RBP2.14□□□□□ -2.07
NNF1YJR112W YGR026WP53217 278 aa2.14□□□□□ -2.07
NNF1YJR112W COS6P53344 381 aa2.14□□□□□ -2.07
NNF1YJR112W DID2P69771 204 aa2.14□□□□□ -2.07
NNF1YJR112W YDR248CQ03786 193 aa2.14□□□□□ -2.07
NNF1YJR112W SSQ1Q05931 657 aaPredicted RBP2.14□□□□□ -2.07
NNF1YJR112W AKR2Q12013 749 aa2.14□□□□□ -2.07
NNF1YJR112W LSO2Q3E772 92 aaKnown RBP2.14□□□□□ -2.07
NNF1YJR112W APS1P35181 156 aa2.13□□□□□ -2.07
NNF1YJR112W DOG2P38773 246 aa2.13□□□□□ -2.07
NNF1YJR112W DOG1P38774 246 aa2.13□□□□□ -2.07
NNF1YJR112W IKI1P38874 309 aa2.13□□□□□ -2.07
NNF1YJR112W GAA1P39012 614 aa2.13□□□□□ -2.07
NNF1YJR112W IRC22P40006 225 aa2.13□□□□□ -2.07
NNF1YJR112W FAR7P43592 221 aa2.13□□□□□ -2.07
NNF1YJR112W IRC18P47056 224 aa2.13□□□□□ -2.07
NNF1YJR112W SNX4P47057 423 aa2.13□□□□□ -2.07
NNF1YJR112W YMD8Q03697 442 aa2.13□□□□□ -2.07
NNF1YJR112W YML108WQ03759 105 aa2.13□□□□□ -2.07
NNF1YJR112W YMR226CQ05016 267 aaKnown RBP2.13□□□□□ -2.07
NNF1YJR112W GET4Q12125 312 aa2.13□□□□□ -2.07
NNF1YJR112W YRA1Q12159 226 aaKnown RBP2.13□□□□□ -2.07
NNF1YJR112W HTB1P02293 131 aaKnown RBP2.12□□□□□ -2.07
NNF1YJR112W HTB2P02294 131 aa2.12□□□□□ -2.07
NNF1YJR112W YPR170W-BP0C5R9 85 aa2.12□□□□□ -2.07
NNF1YJR112W RPL43AP0CX25 92 aaKnown RBP2.12□□□□□ -2.07
NNF1YJR112W RPL43BP0CX26 92 aa2.12□□□□□ -2.07
NNF1YJR112W MATALPHA2P0CY08 210 aa2.12□□□□□ -2.07
NNF1YJR112W HMLALPHA2P0CY09 210 aa2.12□□□□□ -2.07
NNF1YJR112W CBF1P17106 351 aa2.12□□□□□ -2.07
NNF1YJR112W PRM8P53174 237 aa2.12□□□□□ -2.07
NNF1YJR112W PDR17P53844 350 aa2.12□□□□□ -2.07
NNF1YJR112W YNL010WP53981 241 aaKnown RBP2.12□□□□□ -2.07
NNF1YJR112W LPP1Q04396 274 aa2.12□□□□□ -2.07
NNF1YJR112W SMD2Q06217 110 aaKnown RBP2.12□□□□□ -2.07
NNF1YJR112W CDD1Q06549 142 aa2.12□□□□□ -2.07
NNF1YJR112W YCL012CQ8J0M4 134 aa2.12□□□□□ -2.07
NNF1YJR112W GRX2P17695 143 aaKnown RBP2.11□□□□□ -2.07
NNF1YJR112W SPS18P32572 300 aa2.11□□□□□ -2.07
NNF1YJR112W VMA11P32842 164 aa2.11□□□□□ -2.07
NNF1YJR112W RSM25P40496 264 aa2.11□□□□□ -2.07
NNF1YJR112W ERG10P41338 398 aaKnown RBP2.11□□□□□ -2.07
NNF1YJR112W RGM1Q00453 211 aa2.11□□□□□ -2.07
NNF1YJR112W MHT1Q12525 324 aa2.11□□□□□ -2.07
NNF1YJR112W RPL9AP05738 191 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms