RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C ANT1Q06497 328 aa1.59□□□□□ -2.15
RFA3YJL173C YRA1Q12159 226 aaKnown RBP1.59□□□□□ -2.15
RFA3YJL173C ATG40Q99325 256 aa1.59□□□□□ -2.15
RFA3YJL173C HTB1P02293 131 aaKnown RBP1.58□□□□□ -2.16
RFA3YJL173C HTB2P02294 131 aa1.58□□□□□ -2.16
RFA3YJL173C SEC17P32602 292 aa1.58□□□□□ -2.16
RFA3YJL173C YKT6P36015 200 aaKnown RBP1.58□□□□□ -2.16
RFA3YJL173C GAA1P39012 614 aa1.58□□□□□ -2.16
RFA3YJL173C AIM2P39721 246 aa1.58□□□□□ -2.16
RFA3YJL173C EAF6P47128 113 aa1.58□□□□□ -2.16
RFA3YJL173C MCP1Q12106 302 aa1.58□□□□□ -2.16
RFA3YJL173C YDL180WQ12301 547 aa1.58□□□□□ -2.16
RFA3YJL173C YDR157WA0A023PZE8 133 aa1.57□□□□□ -2.16
RFA3YJL173C GPA2P10823 449 aa1.57□□□□□ -2.16
RFA3YJL173C RPB3P16370 318 aaKnown RBP1.57□□□□□ -2.16
RFA3YJL173C MER1P16523 270 aa1.57□□□□□ -2.16
RFA3YJL173C TVP38P36164 337 aa1.57□□□□□ -2.16
RFA3YJL173C YRB2P40517 327 aa1.57□□□□□ -2.16
RFA3YJL173C ERJ5P43613 295 aaPredicted RBP1.57□□□□□ -2.16
RFA3YJL173C CUE4Q04201 117 aaPredicted RBP1.57□□□□□ -2.16
RFA3YJL173C IKI3Q06706 1349 aaKnown RBP1.57□□□□□ -2.16
RFA3YJL173C UPS2P35200 230 aa1.56□□□□□ -2.16
RFA3YJL173C UTP30P36144 274 aaKnown RBP1.56□□□□□ -2.16
RFA3YJL173C GET1P53192 235 aa1.56□□□□□ -2.16
RFA3YJL173C RIO1Q12196 484 aaKnown RBP1.56□□□□□ -2.16
RFA3YJL173C GIS3Q12418 502 aa1.56□□□□□ -2.16
RFA3YJL173C YHR214C-EQ8TGK0 99 aa1.56□□□□□ -2.16
RFA3YJL173C QCR8P08525 94 aa1.55□□□□□ -2.16
RFA3YJL173C YCR090CP25654 182 aaKnown RBP1.55□□□□□ -2.16
RFA3YJL173C RFA3P26755 122 aaKnown RBP1.55□□□□□ -2.16
RFA3YJL173C SPS18P32572 300 aa1.55□□□□□ -2.16
RFA3YJL173C TAF14P35189 244 aa1.55□□□□□ -2.16
RFA3YJL173C YNR077CP53758 84 aa1.55□□□□□ -2.16
RFA3YJL173C HNT1Q04344 158 aaKnown RBP1.55□□□□□ -2.16
RFA3YJL173C GGA1Q06336 557 aa1.55□□□□□ -2.16
RFA3YJL173C ABP140Q08641 628 aaKnown RBP1.55□□□□□ -2.16
RFA3YJL173C GET4Q12125 312 aa1.55□□□□□ -2.16
RFA3YJL173C ODC2Q99297 307 aa1.55□□□□□ -2.16
RFA3YJL173C YIL177CP40434 1758 aa1.54□□□□□ -2.16
RFA3YJL173C YJL225CP40889 1758 aa1.54□□□□□ -2.16
RFA3YJL173C CDC36P06100 191 aaPredicted RBP1.54□□□□□ -2.16
RFA3YJL173C ARG80P07249 177 aa1.54□□□□□ -2.16
RFA3YJL173C AIM25P47140 327 aa1.54□□□□□ -2.16
RFA3YJL173C YDR274CP87283 123 aa1.54□□□□□ -2.16
RFA3YJL173C YFR032C-BQ8TGU2 87 aa1.54□□□□□ -2.16
RFA3YJL173C SIR2P06700 562 aa1.53□□□□□ -2.16
RFA3YJL173C CPA1P07258 411 aaKnown RBP1.53□□□□□ -2.16
RFA3YJL173C RPL27AP0C2H6 136 aaKnown RBP1.53□□□□□ -2.16
RFA3YJL173C CBF1P17106 351 aa1.53□□□□□ -2.16
RFA3YJL173C MMS2P53152 137 aa1.53□□□□□ -2.16
RFA3YJL173C PDR18P53756 1333 aa1.53□□□□□ -2.16
RFA3YJL173C POP3P53833 195 aaPredicted RBP1.53□□□□□ -2.16
RFA3YJL173C DYN3Q04949 312 aa1.53□□□□□ -2.16
RFA3YJL173C YLR236CA0A023PZG4 107 aa1.52□□□□□ -2.17
RFA3YJL173C MATALPHA2P0CY08 210 aa1.52□□□□□ -2.17
RFA3YJL173C HMLALPHA2P0CY09 210 aa1.52□□□□□ -2.17
RFA3YJL173C YPK2P18961 677 aa1.52□□□□□ -2.17
RFA3YJL173C KDX1P36005 433 aa1.52□□□□□ -2.17
RFA3YJL173C OPY1P38271 328 aa1.52□□□□□ -2.17
RFA3YJL173C KNH1P50112 268 aa1.52□□□□□ -2.17
RFA3YJL173C YHR007C-AQ07074 71 aa1.52□□□□□ -2.17
RFA3YJL173C YLR036CQ07986 203 aa1.52□□□□□ -2.17
RFA3YJL173C YNG1Q08465 219 aa1.52□□□□□ -2.17
RFA3YJL173C ADF1Q2V2Q1 113 aa1.52□□□□□ -2.17
RFA3YJL173C ATP15P21306 62 aa1.51□□□□□ -2.17
RFA3YJL173C YER134CP40081 178 aa1.51□□□□□ -2.17
RFA3YJL173C TMA22P47089 198 aaPredicted RBP1.51□□□□□ -2.17
RFA3YJL173C RTC4P53850 401 aa1.51□□□□□ -2.17
RFA3YJL173C PET191Q02772 108 aa1.51□□□□□ -2.17
RFA3YJL173C YLR031WQ07978 186 aa1.51□□□□□ -2.17
RFA3YJL173C YOL160WQ08321 113 aa1.51□□□□□ -2.17
RFA3YJL173C UBR2Q07963 1872 aa1.5□□□□□ -2.17
RFA3YJL173C SNF4P12904 322 aa1.5□□□□□ -2.17
RFA3YJL173C CNB1P25296 175 aa1.5□□□□□ -2.17
RFA3YJL173C ASF2P32448 525 aaPredicted RBP1.5□□□□□ -2.17
RFA3YJL173C YMR295CQ03559 197 aa1.5□□□□□ -2.17
RFA3YJL173C YPR174CQ06616 221 aaPredicted RBP1.5□□□□□ -2.17
RFA3YJL173C JIP3O13555 125 aa1.49□□□□□ -2.17
RFA3YJL173C MBF1O14467 151 aaKnown RBP1.49□□□□□ -2.17
RFA3YJL173C SEC11P15367 167 aa1.49□□□□□ -2.17
RFA3YJL173C OCH1P31755 480 aa1.49□□□□□ -2.17
RFA3YJL173C PAN3P36102 679 aaPredicted RBP1.49□□□□□ -2.17
RFA3YJL173C CAF4P36130 643 aa1.49□□□□□ -2.17
RFA3YJL173C TVP23P38962 199 aa1.49□□□□□ -2.17
RFA3YJL173C YER034WP40022 185 aaKnown RBP1.49□□□□□ -2.17
RFA3YJL173C SKI6P46948 246 aaPredicted RBP1.49□□□□□ -2.17
RFA3YJL173C RCE1Q03530 315 aa1.49□□□□□ -2.17
RFA3YJL173C RAD28Q12021 506 aa1.49□□□□□ -2.17
RFA3YJL173C YDL085C-AQ3E7B7 68 aaKnown RBP1.49□□□□□ -2.17
RFA3YJL173C MRS1P07266 363 aa1.48□□□□□ -2.17
RFA3YJL173C RIO2P40160 425 aaKnown RBP1.48□□□□□ -2.17
RFA3YJL173C PDS1P40316 373 aaPredicted RBP1.48□□□□□ -2.17
RFA3YJL173C DGA1Q08650 418 aa1.48□□□□□ -2.17
RFA3YJL173C QCR7P00128 127 aa1.47□□□□□ -2.17
RFA3YJL173C RPS24AP0CX31 135 aaKnown RBP1.47□□□□□ -2.17
RFA3YJL173C RPS24BP0CX32 135 aaKnown RBP1.47□□□□□ -2.17
RFA3YJL173C EDC3P39998 551 aaKnown RBP1.47□□□□□ -2.17
RFA3YJL173C YEA4P40004 342 aa1.47□□□□□ -2.17
RFA3YJL173C ERG10P41338 398 aaKnown RBP1.47□□□□□ -2.17
RFA3YJL173C MPA43P53583 542 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms