RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W YCR101CP25607 182 aa4.83□□□□□ -1.64
PRE3YJL001W ECM4P36156 370 aa4.83□□□□□ -1.64
PRE3YJL001W SWD3P38123 315 aa4.83□□□□□ -1.64
PRE3YJL001W UMP1P38293 148 aa4.83□□□□□ -1.64
PRE3YJL001W YIP1P53039 248 aa4.83□□□□□ -1.64
PRE3YJL001W RSM27P53305 110 aa4.83□□□□□ -1.64
PRE3YJL001W NEJ1Q06148 342 aa4.83□□□□□ -1.64
PRE3YJL001W GEP3Q08622 556 aa4.83□□□□□ -1.64
PRE3YJL001W YGK3Q12222 375 aaPredicted RBP4.83□□□□□ -1.64
PRE3YJL001W JID1Q12350 301 aa4.83□□□□□ -1.64
PRE3YJL001W TFC7Q12415 435 aa4.83□□□□□ -1.64
PRE3YJL001W SPS18P32572 300 aa4.82□□□□□ -1.64
PRE3YJL001W UTR5P32630 166 aa4.82□□□□□ -1.64
PRE3YJL001W YPT53P36019 220 aa4.82□□□□□ -1.64
PRE3YJL001W NTC20P38302 140 aaPredicted RBP4.82□□□□□ -1.64
PRE3YJL001W YLR281CQ05863 155 aa4.82□□□□□ -1.64
PRE3YJL001W ATG17Q06410 417 aa4.82□□□□□ -1.64
PRE3YJL001W YOL118CQ08259 102 aa4.82□□□□□ -1.64
PRE3YJL001W YLR112WQ12130 139 aa4.82□□□□□ -1.64
PRE3YJL001W RPL31BP0C2H9 113 aaKnown RBP4.81□□□□□ -1.64
PRE3YJL001W PRE7P23724 241 aaKnown RBP4.81□□□□□ -1.64
PRE3YJL001W ARO7P32178 256 aa4.81□□□□□ -1.64
PRE3YJL001W ERG24P32462 438 aaKnown RBP4.81□□□□□ -1.64
PRE3YJL001W PAU2P32612 120 aa4.81□□□□□ -1.64
PRE3YJL001W RAD23P32628 398 aaKnown RBP4.81□□□□□ -1.64
PRE3YJL001W SFK1P35735 353 aa4.81□□□□□ -1.64
PRE3YJL001W YJL213WP40896 331 aa4.81□□□□□ -1.64
PRE3YJL001W GNA1P43577 159 aaPredicted RBP4.81□□□□□ -1.64
PRE3YJL001W PKP2P53170 491 aa4.81□□□□□ -1.64
PRE3YJL001W SRL4Q03085 281 aa4.81□□□□□ -1.64
PRE3YJL001W TLG1Q03322 224 aa4.81□□□□□ -1.64
PRE3YJL001W FIT1Q04433 528 aa4.81□□□□□ -1.64
PRE3YJL001W MCH1Q07376 486 aa4.81□□□□□ -1.64
PRE3YJL001W PRM3Q08931 133 aa4.81□□□□□ -1.64
PRE3YJL001W MDH1P17505 334 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
PRE3YJL001W PET18P25362 215 aa4.8□□□□□ -1.64
PRE3YJL001W VAM7P32912 316 aa4.8□□□□□ -1.64
PRE3YJL001W ACT1P60010 375 aaKnown RBP4.8□□□□□ -1.64
PRE3YJL001W YHP1Q04116 353 aa4.8□□□□□ -1.64
PRE3YJL001W YPD1Q07688 167 aa4.8□□□□□ -1.64
PRE3YJL001W TRM10Q12400 293 aa4.8□□□□□ -1.64
PRE3YJL001W YLL053CP0CD98 152 aa4.79□□□□□ -1.64
PRE3YJL001W STF2P16965 84 aa4.79□□□□□ -1.64
PRE3YJL001W BUD23P25627 275 aaPredicted RBP4.79□□□□□ -1.64
PRE3YJL001W OCH1P31755 480 aa4.79□□□□□ -1.64
PRE3YJL001W AGA2P32781 87 aa4.79□□□□□ -1.64
PRE3YJL001W YBL010CP32788 280 aa4.79□□□□□ -1.64
PRE3YJL001W YKL075CP36083 450 aa4.79□□□□□ -1.64
PRE3YJL001W SDH4P37298 181 aa4.79□□□□□ -1.64
PRE3YJL001W LAG1P38703 411 aa4.79□□□□□ -1.64
PRE3YJL001W AVT6P40074 448 aa4.79□□□□□ -1.64
PRE3YJL001W SYG1P40528 902 aa4.79□□□□□ -1.64
PRE3YJL001W MSS2P40990 351 aa4.79□□□□□ -1.64
PRE3YJL001W GRH1Q04410 372 aaKnown RBP4.79□□□□□ -1.64
PRE3YJL001W SCW10Q04951 389 aa4.79□□□□□ -1.64
PRE3YJL001W DGK1Q12382 290 aa4.79□□□□□ -1.64
PRE3YJL001W MED11Q99278 115 aa4.79□□□□□ -1.64
PRE3YJL001W TDH1P00360 332 aaKnown RBP4.78□□□□□ -1.64
PRE3YJL001W AHC2P25649 128 aa4.78□□□□□ -1.64
PRE3YJL001W ERV1P27882 189 aa4.78□□□□□ -1.64
PRE3YJL001W PRM5P40476 318 aa4.78□□□□□ -1.64
PRE3YJL001W RPL9BP51401 191 aaKnown RBP4.78□□□□□ -1.64
PRE3YJL001W TOS8P53147 276 aa4.78□□□□□ -1.64
PRE3YJL001W CAB4P53332 305 aa4.78□□□□□ -1.64
PRE3YJL001W BUD25P85052 153 aa4.78□□□□□ -1.64
PRE3YJL001W MSC3Q05812 728 aa4.78□□□□□ -1.64
PRE3YJL001W YOL029CQ08187 201 aa4.78□□□□□ -1.64
PRE3YJL001W ATX2Q12067 313 aa4.78□□□□□ -1.64
PRE3YJL001W YLR099W-AQ3E798 87 aa4.78□□□□□ -1.64
PRE3YJL001W ISN1Q99312 450 aa4.78□□□□□ -1.64
PRE3YJL001W RFA3P26755 122 aaKnown RBP4.77□□□□□ -1.65
PRE3YJL001W UTP30P36144 274 aaKnown RBP4.77□□□□□ -1.65
PRE3YJL001W NVJ1P38881 321 aa4.77□□□□□ -1.65
PRE3YJL001W MBB1P39534 108 aa4.77□□□□□ -1.65
PRE3YJL001W ATG27P46989 271 aa4.77□□□□□ -1.65
PRE3YJL001W BXI1P48558 297 aa4.77□□□□□ -1.65
PRE3YJL001W DIE2P50076 525 aa4.77□□□□□ -1.65
PRE3YJL001W IZH1Q03419 316 aa4.77□□□□□ -1.65
PRE3YJL001W AEP3Q12089 606 aa4.77□□□□□ -1.65
PRE3YJL001W YOS1Q3E834 85 aa4.77□□□□□ -1.65
PRE3YJL001W QCR7P00128 127 aa4.76□□□□□ -1.65
PRE3YJL001W YKR045CP36138 183 aa4.76□□□□□ -1.65
PRE3YJL001W YHK8P38776 514 aa4.76□□□□□ -1.65
PRE3YJL001W IKI1P38874 309 aa4.76□□□□□ -1.65
PRE3YJL001W PDS1P40316 373 aaPredicted RBP4.76□□□□□ -1.65
PRE3YJL001W SOL1P50278 321 aa4.76□□□□□ -1.65
PRE3YJL001W DOC1P53068 250 aa4.76□□□□□ -1.65
PRE3YJL001W VMA5P31412 392 aaKnown RBP4.75□□□□□ -1.65
PRE3YJL001W RPB7P34087 171 aa4.75□□□□□ -1.65
PRE3YJL001W YBR137WP38276 179 aa4.75□□□□□ -1.65
PRE3YJL001W SSO2P39926 295 aa4.75□□□□□ -1.65
PRE3YJL001W GPI14P47088 403 aaKnown RBP4.75□□□□□ -1.65
PRE3YJL001W ECM27P47144 725 aa4.75□□□□□ -1.65
PRE3YJL001W YGR149WP48236 432 aa4.75□□□□□ -1.65
PRE3YJL001W CTF19Q02732 369 aa4.75□□□□□ -1.65
PRE3YJL001W MAK3Q03503 176 aa4.75□□□□□ -1.65
PRE3YJL001W HNT1Q04344 158 aaKnown RBP4.75□□□□□ -1.65
PRE3YJL001W YEL009C-AA0A023PZF2 135 aa4.74□□□□□ -1.65
PRE3YJL001W RPL42AP0CX27 106 aaKnown RBP4.74□□□□□ -1.65
PRE3YJL001W RPL42BP0CX28 106 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms