RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W ATG5Q12380 294 aa9.47□□□□□ -0.89
SIM1YIL123W BOL1Q3E793 110 aa9.47□□□□□ -0.89
SIM1YIL123W YDR157WA0A023PZE8 133 aa9.46□□□□□ -0.9
SIM1YIL123W YML003WP0CF16 290 aa9.46□□□□□ -0.9
SIM1YIL123W TOK1P40310 691 aa9.46□□□□□ -0.9
SIM1YIL123W ERG25P53045 309 aa9.46□□□□□ -0.9
SIM1YIL123W SKO1Q02100 647 aa9.46□□□□□ -0.9
SIM1YIL123W AGC1Q12482 902 aa9.46□□□□□ -0.9
SIM1YIL123W PCC1Q3E833 88 aa9.46□□□□□ -0.9
SIM1YIL123W GAR1P28007 205 aaKnown RBP9.45□□□□□ -0.9
SIM1YIL123W REC104P33323 182 aa9.45□□□□□ -0.9
SIM1YIL123W YBR292CP38357 123 aa9.45□□□□□ -0.9
SIM1YIL123W CAF16P43569 289 aa9.45□□□□□ -0.9
SIM1YIL123W XPT1P47165 209 aa9.45□□□□□ -0.9
SIM1YIL123W ADD37Q03233 198 aa9.45□□□□□ -0.9
SIM1YIL123W TMA23Q03525 211 aa9.45□□□□□ -0.9
SIM1YIL123W GMC1Q04399 608 aa9.45□□□□□ -0.9
SIM1YIL123W YDR114CQ04597 100 aa9.45□□□□□ -0.9
SIM1YIL123W IPP1P00817 287 aaKnown RBP9.44□□□□□ -0.9
SIM1YIL123W ROX3P25046 220 aa9.44□□□□□ -0.9
SIM1YIL123W YCR025CP25352 136 aa9.44□□□□□ -0.9
SIM1YIL123W LSB5P25369 354 aa9.44□□□□□ -0.9
SIM1YIL123W RFM1Q12192 310 aa9.44□□□□□ -0.9
SIM1YIL123W PRR2Q12310 699 aa9.44□□□□□ -0.9
SIM1YIL123W SHM2P37291 469 aaKnown RBP9.43□□□□□ -0.9
SIM1YIL123W POG1P40473 351 aa9.43□□□□□ -0.9
SIM1YIL123W PDR17P53844 350 aa9.43□□□□□ -0.9
SIM1YIL123W TDA6Q06466 467 aa9.43□□□□□ -0.9
SIM1YIL123W YBR056W-AI2HB52 66 aa9.42□□□□□ -0.9
SIM1YIL123W YMR31P19955 123 aa9.42□□□□□ -0.9
SIM1YIL123W PEX7P39108 375 aa9.42□□□□□ -0.9
SIM1YIL123W GEP7P53171 287 aa9.42□□□□□ -0.9
SIM1YIL123W PEF1P53238 335 aa9.42□□□□□ -0.9
SIM1YIL123W WSC2P53832 503 aa9.42□□□□□ -0.9
SIM1YIL123W YLR179CQ06252 201 aaKnown RBP9.42□□□□□ -0.9
SIM1YIL123W YDL242WQ07746 117 aa9.42□□□□□ -0.9
SIM1YIL123W TEL1P38110 2787 aa9.42□□□□□ -0.9
SIM1YIL123W MRP2P10663 115 aaPredicted RBP9.41□□□□□ -0.9
SIM1YIL123W YKL107WP34251 309 aa9.41□□□□□ -0.9
SIM1YIL123W UPS2P35200 230 aa9.41□□□□□ -0.9
SIM1YIL123W YGP1P38616 354 aaKnown RBP9.41□□□□□ -0.9
SIM1YIL123W YHR138CP38841 114 aaPredicted RBP9.41□□□□□ -0.9
SIM1YIL123W YGR050CP53231 118 aa9.41□□□□□ -0.9
SIM1YIL123W SED1Q01589 338 aa9.41□□□□□ -0.9
SIM1YIL123W RPL21AQ02753 160 aaKnown RBP9.41□□□□□ -0.9
SIM1YIL123W ECM18Q04623 453 aa9.41□□□□□ -0.9
SIM1YIL123W YTH1Q06102 208 aaPredicted RBP9.41□□□□□ -0.9
SIM1YIL123W YPD1Q07688 167 aa9.41□□□□□ -0.9
SIM1YIL123W YOR015WQ12169 119 aa9.41□□□□□ -0.9
SIM1YIL123W RPL21BQ12672 160 aaKnown RBP9.41□□□□□ -0.9
SIM1YIL123W VPS63O13549 108 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-DR4O74302 440 aa9.4□□□□□ -0.9
SIM1YIL123W RPL39P04650 51 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-AP0CX57 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-PR1P0CX58 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-ORP0CX59 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-PR2P0CX60 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-DR5P0CX65 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-ER2P0CX66 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-GR3P0CX67 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-LR1P0CX68 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-MR2P0CX69 440 aa9.4□□□□□ -0.9
SIM1YIL123W CUE1P38428 203 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-JR2P47099 440 aa9.4□□□□□ -0.9
SIM1YIL123W ARP3P47117 449 aaKnown RBP9.4□□□□□ -0.9
SIM1YIL123W HHO1P53551 258 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-DR1Q03856 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-ML1Q04706 440 aaKnown RBP9.4□□□□□ -0.9
SIM1YIL123W TY1A-BRQ12217 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-NL2Q12470 440 aa9.4□□□□□ -0.9
SIM1YIL123W TY1A-GR2Q12485 440 aa9.4□□□□□ -0.9
SIM1YIL123W RIB5P38145 238 aa9.39□□□□□ -0.91
SIM1YIL123W TTI2P47168 421 aa9.39□□□□□ -0.91
SIM1YIL123W YGL262WP53054 175 aa9.39□□□□□ -0.91
SIM1YIL123W YNL046WP53956 172 aa9.39□□□□□ -0.91
SIM1YIL123W LPP1Q04396 274 aa9.39□□□□□ -0.91
SIM1YIL123W FSH2Q05015 223 aa9.39□□□□□ -0.91
SIM1YIL123W YMR105W-AQ8TGS8 64 aa9.39□□□□□ -0.91
SIM1YIL123W DAL80P26343 269 aa9.39□□□□□ -0.91
SIM1YIL123W PRS3P38689 320 aaKnown RBP9.39□□□□□ -0.91
SIM1YIL123W PIR5P46999 287 aa9.39□□□□□ -0.91
SIM1YIL123W HAM1P47119 197 aaKnown RBP9.39□□□□□ -0.91
SIM1YIL123W CAF40P53829 373 aa9.39□□□□□ -0.91
SIM1YIL123W SPS18P32572 300 aa9.38□□□□□ -0.91
SIM1YIL123W BNA2P47125 453 aa9.38□□□□□ -0.91
SIM1YIL123W HCH1P53834 153 aa9.38□□□□□ -0.91
SIM1YIL123W SNO1Q03144 224 aa9.38□□□□□ -0.91
SIM1YIL123W DCS1Q06151 350 aa9.38□□□□□ -0.91
SIM1YIL123W ATP16Q12165 160 aa9.38□□□□□ -0.91
SIM1YIL123W AHT1P29589 182 aa9.37□□□□□ -0.91
SIM1YIL123W FLO5P38894 1075 aa9.37□□□□□ -0.91
SIM1YIL123W COX15P40086 486 aa9.37□□□□□ -0.91
SIM1YIL123W SMD3P43321 101 aaKnown RBP9.37□□□□□ -0.91
SIM1YIL123W YMR253CQ04835 414 aa9.37□□□□□ -0.91
SIM1YIL123W YOR029WQ12243 111 aa9.37□□□□□ -0.91
SIM1YIL123W RPL9AP05738 191 aaKnown RBP9.36□□□□□ -0.91
SIM1YIL123W ATP10P18496 279 aa9.36□□□□□ -0.91
SIM1YIL123W PSD1P39006 500 aa9.36□□□□□ -0.91
SIM1YIL123W PGD1P40356 397 aa9.36□□□□□ -0.91
SIM1YIL123W YJL118WP47022 219 aa9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms