RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	TVP23	P38962	199 aa		0.79	□□□□□ -2.28
URM1	YIL008W	MOB1	P40484	314 aa		0.79	□□□□□ -2.28
URM1	YIL008W	ICE2	P40499	491 aa		0.79	□□□□□ -2.28
URM1	YIL008W	NUP57	P48837	541 aa		0.79	□□□□□ -2.28
URM1	YIL008W	MPP6	P53725	186 aa	Predicted RBP	0.79	□□□□□ -2.28
URM1	YIL008W	SSQ1	Q05931	657 aa	Predicted RBP	0.79	□□□□□ -2.28
URM1	YIL008W	YPL229W	Q99395	206 aa		0.79	□□□□□ -2.28
URM1	YIL008W	MLP1	Q02455	1875 aa	Known RBP	0.79	□□□□□ -2.28
URM1	YIL008W	YMR144W	P40214	342 aa	Known RBP	0.78	□□□□□ -2.28
URM1	YIL008W	YML096W	Q04489	525 aa		0.78	□□□□□ -2.28
URM1	YIL008W	YMR321C	Q04898	105 aa		0.78	□□□□□ -2.28
URM1	YIL008W	CPA1	P07258	411 aa	Known RBP	0.77	□□□□□ -2.29
URM1	YIL008W	QCR8	P08525	94 aa		0.77	□□□□□ -2.29
URM1	YIL008W	FZF1	P32805	299 aa		0.77	□□□□□ -2.29
URM1	YIL008W	TCD1	P38756	429 aa		0.77	□□□□□ -2.29
URM1	YIL008W	YNL217W	P40152	326 aa		0.77	□□□□□ -2.29
URM1	YIL008W	PGD1	P40356	397 aa		0.77	□□□□□ -2.29
URM1	YIL008W	ABF2	Q02486	183 aa		0.77	□□□□□ -2.29
URM1	YIL008W	MSH5	Q12175	901 aa		0.77	□□□□□ -2.29
URM1	YIL008W	HFA1	P32874	2273 aa		0.77	□□□□□ -2.29
URM1	YIL008W	ECM29	P38737	1868 aa		0.76	□□□□□ -2.29
URM1	YIL008W	MSB2	P32334	1306 aa		0.76	□□□□□ -2.29
URM1	YIL008W	RPL27B	P0C2H7	136 aa	Known RBP	0.76	□□□□□ -2.29
URM1	YIL008W	RME1	P32338	300 aa	Known RBP	0.76	□□□□□ -2.29
URM1	YIL008W	TMA19	P35691	167 aa	Known RBP	0.76	□□□□□ -2.29
URM1	YIL008W	RIB1	P38066	345 aa		0.76	□□□□□ -2.29
URM1	YIL008W	GPI8	P49018	411 aa		0.76	□□□□□ -2.29
URM1	YIL008W	BOL2	P53082	120 aa		0.76	□□□□□ -2.29
URM1	YIL008W	SPG3	Q04398	127 aa	Predicted RBP	0.76	□□□□□ -2.29
URM1	YIL008W	YLR126C	Q12288	251 aa		0.76	□□□□□ -2.29
URM1	YIL008W	PSF1	Q12488	208 aa		0.76	□□□□□ -2.29
URM1	YIL008W	MYO1	P08964	1928 aa		0.76	□□□□□ -2.29
URM1	YIL008W	YHR139C-A	O13536	103 aa		0.75	□□□□□ -2.29
URM1	YIL008W	VAR1	P02381	398 aa		0.75	□□□□□ -2.29
URM1	YIL008W	COQ1	P18900	473 aa		0.75	□□□□□ -2.29
URM1	YIL008W	PEX34	P25584	144 aa		0.75	□□□□□ -2.29
URM1	YIL008W	VPS21	P36017	210 aa	Known RBP	0.75	□□□□□ -2.29
URM1	YIL008W	TVP38	P36164	337 aa		0.75	□□□□□ -2.29
URM1	YIL008W	HMF1	P40037	129 aa	Known RBP	0.75	□□□□□ -2.29
URM1	YIL008W	RTT105	P40063	208 aa		0.75	□□□□□ -2.29
URM1	YIL008W	YRB2	P40517	327 aa		0.75	□□□□□ -2.29
URM1	YIL008W	AIF1	P52923	378 aa		0.75	□□□□□ -2.29
URM1	YIL008W	YNL134C	P53912	376 aa	Known RBP	0.75	□□□□□ -2.29
URM1	YIL008W	YNL010W	P53981	241 aa	Known RBP	0.75	□□□□□ -2.29
URM1	YIL008W	TRM12	Q04235	462 aa		0.75	□□□□□ -2.29
URM1	YIL008W	YOL107W	Q12239	342 aa		0.75	□□□□□ -2.29
URM1	YIL008W	YOR029W	Q12243	111 aa		0.75	□□□□□ -2.29
URM1	YIL008W	SLH1	P53327	1967 aa	Known RBP	0.75	□□□□□ -2.29
URM1	YIL008W	POL2	P21951	2222 aa	Known RBP	0.74	□□□□□ -2.29
URM1	YIL008W	BRR2	P32639	2163 aa	Known RBP	0.74	□□□□□ -2.29
URM1	YIL008W	GAA1	P39012	614 aa		0.74	□□□□□ -2.29
URM1	YIL008W	HOC1	P47124	396 aa		0.74	□□□□□ -2.29
URM1	YIL008W	MPA43	P53583	542 aa	Predicted RBP	0.74	□□□□□ -2.29
URM1	YIL008W	DID2	P69771	204 aa		0.74	□□□□□ -2.29
URM1	YIL008W	KAP95	Q06142	861 aa	Known RBP	0.74	□□□□□ -2.29
URM1	YIL008W	ANT1	Q06497	328 aa		0.74	□□□□□ -2.29
URM1	YIL008W	YPL162C	Q12042	273 aa		0.74	□□□□□ -2.29
URM1	YIL008W	NCB2	Q92317	146 aa		0.74	□□□□□ -2.29
URM1	YIL008W	DUR1,2	P32528	1835 aa	Known RBP	0.73	□□□□□ -2.29
URM1	YIL008W	FAS1	P07149	2051 aa	Known RBP	0.73	□□□□□ -2.29
URM1	YIL008W	HAP2	P06774	265 aa		0.73	□□□□□ -2.29
URM1	YIL008W	YPR170W-B	P0C5R9	85 aa		0.73	□□□□□ -2.29
URM1	YIL008W	TCP1	P12612	559 aa	Known RBP	0.73	□□□□□ -2.29
URM1	YIL008W	DOC1	P53068	250 aa		0.73	□□□□□ -2.29
URM1	YIL008W	SAY1	P53324	424 aa		0.73	□□□□□ -2.29
URM1	YIL008W	UBC7	Q02159	165 aa		0.73	□□□□□ -2.29
URM1	YIL008W	YMD8	Q03697	442 aa		0.73	□□□□□ -2.29
URM1	YIL008W	YML108W	Q03759	105 aa		0.73	□□□□□ -2.29
URM1	YIL008W	MOT1	P32333	1867 aa		0.73	□□□□□ -2.29
URM1	YIL008W	YLR422W	Q06409	1932 aa		0.72	□□□□□ -2.29
URM1	YIL008W	RAD50	P12753	1312 aa		0.72	□□□□□ -2.29
URM1	YIL008W	PDR18	P53756	1333 aa		0.72	□□□□□ -2.29
URM1	YIL008W	SEC16	P48415	2195 aa	Known RBP	0.72	□□□□□ -2.29
URM1	YIL008W	YBR056W-A	I2HB52	66 aa		0.72	□□□□□ -2.29
URM1	YIL008W	REP2	P03872	296 aa		0.72	□□□□□ -2.29
URM1	YIL008W	RPL43A	P0CX25	92 aa	Known RBP	0.72	□□□□□ -2.29
URM1	YIL008W	RPL43B	P0CX26	92 aa		0.72	□□□□□ -2.29
URM1	YIL008W	MRPS28	P21771	286 aa		0.72	□□□□□ -2.29
URM1	YIL008W	MAK31	P23059	88 aa		0.72	□□□□□ -2.29
URM1	YIL008W	SRB4	P32569	687 aa		0.72	□□□□□ -2.29
URM1	YIL008W	RIB7	P33312	244 aa		0.72	□□□□□ -2.29
URM1	YIL008W	YET1	P35723	206 aa		0.72	□□□□□ -2.29
URM1	YIL008W	SRX1	P36077	127 aa		0.72	□□□□□ -2.29
URM1	YIL008W	IRC22	P40006	225 aa		0.72	□□□□□ -2.29
URM1	YIL008W	YER076C	P40049	302 aa		0.72	□□□□□ -2.29
URM1	YIL008W	PEX17	P40155	199 aa		0.72	□□□□□ -2.29
URM1	YIL008W	MCM22	P47167	239 aa		0.72	□□□□□ -2.29
URM1	YIL008W	YJR149W	P47177	404 aa		0.72	□□□□□ -2.29
URM1	YIL008W	MRPL50	P53724	139 aa		0.72	□□□□□ -2.29
URM1	YIL008W	KRE28	Q04431	385 aa		0.72	□□□□□ -2.29
URM1	YIL008W	YIL046W-A	Q3E7Z4	54 aa		0.72	□□□□□ -2.29
URM1	YIL008W	LAA1	P39526	2014 aa		0.72	□□□□□ -2.29
URM1	YIL008W	YCL042W	P25572	119 aa		0.71	□□□□□ -2.3
URM1	YIL008W	URA8	P38627	578 aa	Predicted RBP	0.71	□□□□□ -2.3
URM1	YIL008W	ERG10	P41338	398 aa	Known RBP	0.71	□□□□□ -2.3
URM1	YIL008W	BNA6	P43619	295 aa		0.71	□□□□□ -2.3
URM1	YIL008W	NUP84	P52891	726 aa		0.71	□□□□□ -2.3
URM1	YIL008W	CWC21	Q03375	135 aa	Known RBP	0.71	□□□□□ -2.3
URM1	YIL008W	SMD2	Q06217	110 aa	Known RBP	0.71	□□□□□ -2.3
URM1	YIL008W	PAM18	Q07914	168 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms